Egla016783.1
Basic Information
- Insect
- Eugnorisma glareosa
- Gene Symbol
- Bcl11a
- Assembly
- GCA_947578425.1
- Location
- OX387984.1:6793571-6806931[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 2.8 2.4e+02 3.1 1.2 1 23 272 295 272 295 0.92 2 10 0.00072 0.062 14.4 1.1 2 23 330 352 329 352 0.96 3 10 0.015 1.3 10.3 1.5 2 23 357 379 356 379 0.96 4 10 9.9e-05 0.0086 17.1 2.2 1 23 382 405 382 405 0.98 5 10 0.0037 0.32 12.2 3.4 3 23 410 431 409 431 0.96 6 10 0.021 1.8 9.8 0.4 3 21 449 467 448 472 0.93 7 10 0.00089 0.077 14.1 0.5 2 23 481 503 480 503 0.95 8 10 0.15 13 7.1 1.8 1 23 509 532 509 532 0.94 9 10 0.00049 0.042 14.9 0.4 3 23 543 563 542 563 0.98 10 10 7e-05 0.0061 17.6 0.2 1 23 569 592 569 592 0.98
Sequence Information
- Coding Sequence
- ATGGATATAAAGGATAAATCTTATCATATATTTACGATATGTCAAGGCTGTTTGAGCGCTGATAGAAACCTAAAATGCATAACTGGTCAGAATAAAGCGCTATTTATTAAACTAAGGGAGGATGTGATACAAAATGAAAATGATACAAGAGGCCTACTGCTGTGTTGGGAGTGTGTCGCTTTACTGAACAAGATGAAATACTTCCAAGCTCGCATCAAAACTGCTCAGTTCAGATTGGTGCAGTATCTGCAAACTTTCTATGACAACAAGAAAGACATACCCCACACATTGTCCCCGCTATTAAAAAGCAAACGTAAAGAACATGAGTACAACTACATCTATGACGAAGACCAAAAAGATAATTTTATCGAACAAAACAACCGGTTACCAAAGATTCTTGAAAAAGACTTACTACTTGAAAGAAAAGACCTAACATTTGATAAAACAGACCTCATTCTTGAAAAAGAAGAAACAGATGACGAAAGCGCATTTTTACTAAACATAAAATTAGAAAACAATGAAATTTTCAAAGAAGAATTTGAAGACAGTCTAAACAACGATACGGATTACTATGAGCCAGAGTTAAAACAGGAAACCGATGAAGATTCTACTCCTCTTTATCCAAAGAAAAAAACATTTCGTAAATTAATATCGAGAATAAAAAAATATGAAGAATTTGCAAGCGTTACTACGATTCATGATCGATTTCCAAGGAATGTCAGTCCGTACTATGATACGGTTTTCGTCAGTGTGAAAGAGATTGAACAAATTTATTTGTTAAGAGTTAATCACCGATACGATAAAAATTTGCCATATCGATGTATAGAGTGTAAAATGGGGTATAAAGTGAGATTGGATTTTCTGAGGCATCAGAGTTTTAATCATTTTGAGTCACAATACCCAACAAACTGCCTAGCCTGTAAACGCGAGATACTCTCAGCATCTCATCTCGAAGAGCACTGGACCAACAACCACAACCCCATGCTGCGCTGTACGTTCTGCGGAGAACTTTCGAGAACTAAAGGGGAACTGAAGAAGCATCTCAACAGATCGCATACTAAGAAGCTTACTTGTCATAGCTGTGCTATGGAGTTTAGAAATCTTGGTGAATTCAGCAAGCATTACAAAATGGCGCATGAGAGGTTCACCTGTGATTATTGCAACCAAAACATAAGCTCCAAACGGTCGCTGGAGAGGCATATCAAGAAAAAGCACCTCCCCGGCCACTGCTCAATCTGCAACAAAGACTACCGCACATACCACACCCTGGAGCTGCACCTCCTAAGGGTTCACCCCGAAGTGGTCCCTCACCTGATACCGGAGACCCGAAAGGAACTGCGCTACTGTGTGGAGTGCGATAGACAGTACCCGACTGTGTCGAAGTATAAGAGGCATTTGCAGCAGTCGGCTCGGCACAGGCCGCAGAAGAAAGTCAGAATACCGTGCCCGGCTTGTGACAAGAAATTTACCCGCATGAGTTACAAGAACAATCATTACAGATTAGTACATGTTAAAGAAACCAAGCATTATTGCGGATTGTGTAATAAGTACTTTGCGAACGGATACGGCATCCGCATGCACATTCAGCACGTCCACCAAAAGGTACCGAAGATCAAAGACAAGATATGCGATCTTTGCGGCAGGGCCTTTAATTCCAACAGAATCCTGATAAACCACCGTCGCACGCACACTGGAGAGCGTCCCTACAAATGTCCGCAATGCCCCGCGTCTTTTGCGCAGGAAACCGCCATGAAATCACATCTGAAATCGCAGCACAAGAGCTTTATACTGTCCACGTAA
- Protein Sequence
- MDIKDKSYHIFTICQGCLSADRNLKCITGQNKALFIKLREDVIQNENDTRGLLLCWECVALLNKMKYFQARIKTAQFRLVQYLQTFYDNKKDIPHTLSPLLKSKRKEHEYNYIYDEDQKDNFIEQNNRLPKILEKDLLLERKDLTFDKTDLILEKEETDDESAFLLNIKLENNEIFKEEFEDSLNNDTDYYEPELKQETDEDSTPLYPKKKTFRKLISRIKKYEEFASVTTIHDRFPRNVSPYYDTVFVSVKEIEQIYLLRVNHRYDKNLPYRCIECKMGYKVRLDFLRHQSFNHFESQYPTNCLACKREILSASHLEEHWTNNHNPMLRCTFCGELSRTKGELKKHLNRSHTKKLTCHSCAMEFRNLGEFSKHYKMAHERFTCDYCNQNISSKRSLERHIKKKHLPGHCSICNKDYRTYHTLELHLLRVHPEVVPHLIPETRKELRYCVECDRQYPTVSKYKRHLQQSARHRPQKKVRIPCPACDKKFTRMSYKNNHYRLVHVKETKHYCGLCNKYFANGYGIRMHIQHVHQKVPKIKDKICDLCGRAFNSNRILINHRRTHTGERPYKCPQCPASFAQETAMKSHLKSQHKSFILST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00712351;
- 90% Identity
- iTF_01062271;
- 80% Identity
- -