Basic Information

Insect: Eugnorisma glareosa
Gene Symbol: -
Assembly: GCA_947578425.1
Location: OX387984.1:11413224-11430504[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2.6 2.2e+02 3.2 1.0 1 23 257 280 257 280 0.89

2 12 0.64 55 5.1 1.3 1 23 288 310 288 310 0.94

3 12 0.19 17 6.8 1.7 1 23 314 336 314 336 0.97

4 12 1.4e-05 0.0012 19.7 0.6 1 20 343 362 343 364 0.94

5 12 0.0044 0.38 11.9 1.0 2 21 371 390 371 391 0.92

6 12 4.3e-05 0.0037 18.2 0.1 2 23 407 428 406 428 0.94

7 12 0.00044 0.038 15.1 0.3 1 23 433 455 433 455 0.97

8 12 0.021 1.8 9.8 4.6 1 21 464 484 464 489 0.93

9 12 2.3e-05 0.002 19.1 2.3 1 23 497 520 497 520 0.93

10 12 0.0047 0.41 11.8 0.4 1 23 526 549 526 549 0.94

11 12 0.016 1.4 10.1 0.3 3 19 562 578 560 579 0.89

12 12 0.074 6.4 8.1 0.7 1 23 592 615 592 615 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2.6	2.2e+02	3.2	1.0	1	23	257	280	257	280	0.89
2	12	0.64	55	5.1	1.3	1	23	288	310	288	310	0.94
3	12	0.19	17	6.8	1.7	1	23	314	336	314	336	0.97
4	12	1.4e-05	0.0012	19.7	0.6	1	20	343	362	343	364	0.94
5	12	0.0044	0.38	11.9	1.0	2	21	371	390	371	391	0.92
6	12	4.3e-05	0.0037	18.2	0.1	2	23	407	428	406	428	0.94
7	12	0.00044	0.038	15.1	0.3	1	23	433	455	433	455	0.97
8	12	0.021	1.8	9.8	4.6	1	21	464	484	464	489	0.93
9	12	2.3e-05	0.002	19.1	2.3	1	23	497	520	497	520	0.93
10	12	0.0047	0.41	11.8	0.4	1	23	526	549	526	549	0.94
11	12	0.016	1.4	10.1	0.3	3	19	562	578	560	579	0.89
12	12	0.074	6.4	8.1	0.7	1	23	592	615	592	615	0.97

Sequence Information

Coding Sequence: ATGAAGGAAGTTAACATAAATATAGAAGGCTATAACGTTAACGGAATATGTGTTGGCTGCTTGAATTACAATCGTCGTATGTTTTACCATCCTACAGTGAATGAAATTTTTCGTTTGCTCGGAAATATTGATGTGCCTGATGGGCTAGAAGTGCAGGTGTGCTGGGAATGCCTGGCGCGAGTCAAATCTGCCATCAAGTTTAAGGAGCAAATACTCAAGTCTTATGACTTTCTTATCTTGTACTCAAAAGAGCACACATTCCTAGACTCTCCAACGGACTTCAAGCCCTACGCCACTCGCAACATAGACAAGACCGAGGTGGAGTTCTACGAGTGTCTGCCAGAGACAGCCGAGGCGGGGGATGAGGACAGAGAGATCGATGTCAAAGACGAAGACGACAGTGAGGAGAAGTATGCTTTCGAGGTAGCAATAAAAGAGGAAACGTTTGACGACCCATACTTGCAAGCTATACCAGCCATAGACGATGATGTCACTTCAGATGAAGATGTGCAGCTTTCTAAACTGAAAGAGAAAGAGACGGAGAAAGTCAAGAAGAAACGGAAGAGTGAGAGTAAGAAGGAGAAGAAAAGAGATAGGATAGACTCCCCAAAACGCCAGAAGACTAAAAAGGACAAAAATCCCGAAAAGAAGAGTAGAAAGCTAAAGAACCTTCCAGAAGATTTAGTGGAATTGTATACCATGAGTAAAGAAGAAATGTGGACGATCAGGATCGAGGATCGGAACAGCAAGGAGTTCCTGAAGCTTAAGTTTAGGTGTGATGATTGCATCATTGCCTTCAACAATGAAAAGTTGAAACATGATCATCTAAATGGAAAACATCAACCAAAAAGTGAAAATTGCCATCAATGCTCAATATGCCAAGCCTACTTCCTGACGAAAGACAACGTGTCGTCGCACAAGGCGCTGCACCAACAAGGGTACAGGTGTCGGCAGTGCGGCTTCAGCACGACCCTCAAGCGGCGCATGCTCAAACATGTAGCGAGCCACGCGCCCACTGGAGACGCGCATGTGTGTCCCACTTGTGGGACTAGCTTTAGCACAAAATCGAAGCTAACGTACCACCGCGGCGTCTGCCGCCAAGAAAGGCCGCAGTGTGACTGTTGTGGGAAAGTGTTCGCCAACAAAATGACGCTCAAGTATCATCTGAAAATCCTGCCTCAGAATAAAGACGACAAGCCTAAAGAGAAGCAGTACATACCGTGCAAGGGATGCGATAAAGTGTTCCCGTCTAAGAAGAGTTACAGAGCACATGTTGTCATCCACGACGGCCTAACCTACCCGTGCCCGATCTGTGGCAAGCTGTTCCAGTGGAAGCGCAACCTGGCACGACATTCGCGCAACCATCGGGAGCGGGAAGCGGGCAACCTGCACGAGTGTCGCGCTTGCAGCAAGACGTTCGCGAGCAGGGACTGCTACAACAACCACATGCGGCTCAGCAAGCGGCATGTGTCGCAGGATACGTACCAACACGAATGTAACTATTGCGGTAAGAAATTCGCTACAAAATGGTGTCTGACGGACCACATTGACTGGGATCATTTGAAGAGAATCAAGTACCAATGCAGTTTCTGTTTCAAGGCATTCAAAACAGCCAAGATACTGGTAGCTCATGTCAATAATATACACGAGGGTAAGAAAAAAGAAGCCGACGGTGAACATCTGTGTGAAATATGTGGTAAATCGTACAGGACAGTGAAACGCCTAAAAGGGCACGTATGGGCGATGCACACCAAGCGGTCTCACAGCAAGGTGTACTCGTGTAAGCTATGTCCGGCCACGTTCATGTGGCAGACCAGCATATACAAGCACATGAAGATGATGCACGACACTAATAAGAAGACTAAGTCACCTCGCGCCGTCCCCCCTCCTGTGAAGAAAGAAGAACCCTACCCAGGAATCGAACTTGCGAACCGCATGCAGTACTTCCAACAAAACATTGGTGGCAACTTAAATATAGTTCACATACAACCTATAGGAATCACTCAAAATATTGTCTAA
Protein Sequence: MKEVNINIEGYNVNGICVGCLNYNRRMFYHPTVNEIFRLLGNIDVPDGLEVQVCWECLARVKSAIKFKEQILKSYDFLILYSKEHTFLDSPTDFKPYATRNIDKTEVEFYECLPETAEAGDEDREIDVKDEDDSEEKYAFEVAIKEETFDDPYLQAIPAIDDDVTSDEDVQLSKLKEKETEKVKKKRKSESKKEKKRDRIDSPKRQKTKKDKNPEKKSRKLKNLPEDLVELYTMSKEEMWTIRIEDRNSKEFLKLKFRCDDCIIAFNNEKLKHDHLNGKHQPKSENCHQCSICQAYFLTKDNVSSHKALHQQGYRCRQCGFSTTLKRRMLKHVASHAPTGDAHVCPTCGTSFSTKSKLTYHRGVCRQERPQCDCCGKVFANKMTLKYHLKILPQNKDDKPKEKQYIPCKGCDKVFPSKKSYRAHVVIHDGLTYPCPICGKLFQWKRNLARHSRNHREREAGNLHECRACSKTFASRDCYNNHMRLSKRHVSQDTYQHECNYCGKKFATKWCLTDHIDWDHLKRIKYQCSFCFKAFKTAKILVAHVNNIHEGKKKEADGEHLCEICGKSYRTVKRLKGHVWAMHTKRSHSKVYSCKLCPATFMWQTSIYKHMKMMHDTNKKTKSPRAVPPPVKKEEPYPGIELANRMQYFQQNIGGNLNIVHIQPIGITQNIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01063169;
90% Identity: iTF_01062197;
80% Identity: -