Basic Information

Insect: Eugnorisma glareosa
Gene Symbol: -
Assembly: GCA_947578425.1
Location: OX387983.1:7834184-7844754[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.2 18 6.7 4.5 3 23 238 259 237 259 0.94

2 10 0.052 4.5 8.6 0.2 2 23 285 307 284 307 0.94

3 10 0.19 16 6.8 1.6 1 23 330 352 330 352 0.95

4 10 2.5e-06 0.00022 22.1 1.6 1 23 356 378 356 378 0.99

5 10 0.056 4.8 8.4 2.0 1 23 383 406 383 406 0.86

6 10 0.0038 0.33 12.1 1.2 2 23 415 437 414 437 0.95

7 10 4.4e-05 0.0038 18.2 1.8 1 23 444 467 444 467 0.97

8 10 0.0013 0.11 13.6 0.3 1 23 473 495 473 495 0.96

9 10 2.8e-06 0.00024 22.0 0.8 1 23 501 523 501 523 0.99

10 10 0.00031 0.027 15.5 1.3 1 23 529 552 529 552 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.2	18	6.7	4.5	3	23	238	259	237	259	0.94
2	10	0.052	4.5	8.6	0.2	2	23	285	307	284	307	0.94
3	10	0.19	16	6.8	1.6	1	23	330	352	330	352	0.95
4	10	2.5e-06	0.00022	22.1	1.6	1	23	356	378	356	378	0.99
5	10	0.056	4.8	8.4	2.0	1	23	383	406	383	406	0.86
6	10	0.0038	0.33	12.1	1.2	2	23	415	437	414	437	0.95
7	10	4.4e-05	0.0038	18.2	1.8	1	23	444	467	444	467	0.97
8	10	0.0013	0.11	13.6	0.3	1	23	473	495	473	495	0.96
9	10	2.8e-06	0.00024	22.0	0.8	1	23	501	523	501	523	0.99
10	10	0.00031	0.027	15.5	1.3	1	23	529	552	529	552	0.97

Sequence Information

Coding Sequence: ATGTCGTACGGCATCGTTTGCCGTTGCTGCCTTTTGCGGGCTCCTGATAAAGTGCTGAAGGCAGAATATTCAACTTTGGGCAAATCAGAAGTTTACGCCGATATGCTGAAAGATTGCTTCGAGATTCAGATACATTTGGATAATGACAGTGAAGATGGTATTTGTGAAGTCTGTATCACAAGATTACGGGATGCTTGCGACTTTAAGGAGCAAGTACAGCAAAGTCAGAAAGAGTTCCTGTCGAAACTTAACGCTTATAGTGTTAAAGATGAATCGGGGCCAAAGGTTAAGGAAGAATACCTGGATTTGGATGACGAAAATGGGATATATTTTCTAGAATTAAAAGACGAAATGTCAGACGATTTCGACGACTTCAAAGACGAGGACGATAACAAGAAGTTAGCGGAAATGTTCGGTTTCAATGACGTCACCGTTAAGAAGAGATCCGATAAACGCAGAAACAAGAAACGCCTGCTGCTTGAGAATAGTGGTAAAGAACTTAAATCGAAAAGCCGTGCCATGAAGCTGTCCCTCCGCGCATTAAAACAACAACAGGTGATGGTGAACAAGATCCTCAACCCAGTGAAGATGTCCTCGGGCTCATCCAAGCGCCTGATTAGCGACGCGTCCAAGAACAGAGCCAACATCGACACGCTGCTCAAATACTCCAACTGCACTCCTTTCGCAAATAAAACTATAGCAGGAATCCTCTGCGCCTACTGCAAAACAACATACAGAGATCTACACCACATCCGGACCCACATCCACGAAGAACACGGCAAGGACCACCTCATAGAGTCCAAACGGATGGACAAAAACAACTTAtccattaaaatggatatcacagacctcaggtgcaagctttgtaacactagtgcggatactatagtcagtttaaagaatcatttgactatagcacatgacataaaattctatcctgatgtaaatgattatgttctagaatttaagttgactgacggagaaattcataactgtgctttgtgtagctcaacttatgagacgttcaaaatgcttttacaacacatgaatgggcattacagaaattatgtctgtgaaatatgcgatttaggtttcataaaccaacataagttaagaaatcatcggcgtacgcatgaaattggcaattttaactgtactttctgtgacaaaatcttcagtactcgagtaaggaaattgtggcatgagaagtacacacataaccccagtgctagatacacaaccagttgccctcattgcgcagaatccttcacaagttactacagaagaaaccgacacatggccgttgaacataacatgtcagcagctacttacaaatgtaacatttgtgacaaatctttcattttaaagtcaaaactaacatttcatataaaaaaagtacatttaatggagcggaatcacatatgtccggagtgtgggcaaggattttttataaagcagtcgttagacgagcatatgattaagcataatggtgaacgggtgtttaaatgttcagtttgtgcaaaggcttatgctagaaaaaagactttaagagaacatatgaggatacataataatgatagaaggttcaaatgtggggtgtgtgcactagcttttgtacaaaagtgtagtttaaaaagtcatatgctctcaaatcatggGGTTACTTTAGCGGAGTATGAGAATGGAAGAACTGGATTATGTAGTCCATAG
Protein Sequence: MSYGIVCRCCLLRAPDKVLKAEYSTLGKSEVYADMLKDCFEIQIHLDNDSEDGICEVCITRLRDACDFKEQVQQSQKEFLSKLNAYSVKDESGPKVKEEYLDLDDENGIYFLELKDEMSDDFDDFKDEDDNKKLAEMFGFNDVTVKKRSDKRRNKKRLLLENSGKELKSKSRAMKLSLRALKQQQVMVNKILNPVKMSSGSSKRLISDASKNRANIDTLLKYSNCTPFANKTIAGILCAYCKTTYRDLHHIRTHIHEEHGKDHLIESKRMDKNNLSIKMDITDLRCKLCNTSADTIVSLKNHLTIAHDIKFYPDVNDYVLEFKLTDGEIHNCALCSSTYETFKMLLQHMNGHYRNYVCEICDLGFINQHKLRNHRRTHEIGNFNCTFCDKIFSTRVRKLWHEKYTHNPSARYTTSCPHCAESFTSYYRRNRHMAVEHNMSAATYKCNICDKSFILKSKLTFHIKKVHLMERNHICPECGQGFFIKQSLDEHMIKHNGERVFKCSVCAKAYARKKTLREHMRIHNNDRRFKCGVCALAFVQKCSLKSHMLSNHGVTLAEYENGRTGLCSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00449560;
90% Identity: iTF_01535213;
80% Identity: -