Basic Information

Insect: Eugnorisma glareosa
Gene Symbol: erm
Assembly: GCA_947578425.1
Location: OX387981.1:14748238-14749362[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 5.9e-06 0.00051 21.0 0.4 1 20 147 166 147 169 0.92

2 6 3.1e-07 2.7e-05 25.0 1.6 1 23 175 197 175 197 0.97

3 6 1e-06 8.9e-05 23.3 2.1 1 23 203 225 203 225 0.98

4 6 1.3e-05 0.0011 19.9 3.2 1 23 231 253 231 253 0.98

5 6 0.0009 0.078 14.1 5.9 1 23 259 281 259 281 0.99

6 6 2.3e-05 0.002 19.1 4.4 1 23 287 310 287 310 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	5.9e-06	0.00051	21.0	0.4	1	20	147	166	147	169	0.92
2	6	3.1e-07	2.7e-05	25.0	1.6	1	23	175	197	175	197	0.97
3	6	1e-06	8.9e-05	23.3	2.1	1	23	203	225	203	225	0.98
4	6	1.3e-05	0.0011	19.9	3.2	1	23	231	253	231	253	0.98
5	6	0.0009	0.078	14.1	5.9	1	23	259	281	259	281	0.99
6	6	2.3e-05	0.002	19.1	4.4	1	23	287	310	287	310	0.98

Sequence Information

Coding Sequence: ATGCAACCATTCCAATCGACAGCTCGACCCGAGGGTCCCCGGGAGTCCTCCCCCGAGCGAGCCAAATCCCCCGACACCCCCACAGCGCCAGTCCTCAACTTCTCCATCGCACGGCTCATGGAACCTGACAGGAAAAAGTCAGTGTCCCCTGAACCCCAGCCACCGCCACCAGGGTTCCTGTCCTACGGAGCGCAGCTGCTAGATTCAGCGTTCAAGCAGTACATCCCAGCGGCGAGAAGACAGCTTGTGTCTCACTATCCTCTGCTGTACTATGGGCCTGATCTTGTATCGCTGACGTATGCTCATCAGCTGCACTTACCCCGGCCTCCTCCACCGACATCACCCGTCCAGCGACCGCCAAGTCCACGTCCTCCAGCAGCAGACCATGCCGTCTCATCCACCACAGGGCCCACTCCTTCTCCGGCCAAGAACAAAAGCTTTGcctgcggtgactgcggcaaggtcttcaacgctcactacaacctcaccagacacatgccagtccacacaggcgccaggcccttcgtctgcaagatctgcggcaaaggctttcgacaggcctccacgctatgtcgacacaagatcatacacacttcagaaaagcctcacaaatgtctcacttgcggtaaagcttttaacagatcgtcgactttaaacacgcacgccaggatccatgccgggtacaaaccttttgtctgcgagttttgtggtaaagggttccaccaaaaaggcaattacaagaaccacagacttactcacagcggcgagaaggcttacaagtgcagcatttgcaacaaagccttccaccagatctataacctgaccttccatatgcacacgcacaacgagcggaaacctttcacctgcagtatttgtgcaaaaggtttctgcaggaactttgatctcaagaagcacaCCAGGAAACTTCACCTGGGGGCTGGAAGCTCCAACAACGGAGATTCATCCCTAGATACCCAAGACGAATCCACGCAAGAAGCAACCAGCAGCCCAGTTGAAGACGCAAGTAGGGTAGCCTTCAGGCCATTCCTTGGCGCCTCATACCCTCGCATCCTGGATCCGTCGCGAATGACTGCTCCCAACAATTTCTTCTCCAAGTTATTGTGA
Protein Sequence: MQPFQSTARPEGPRESSPERAKSPDTPTAPVLNFSIARLMEPDRKKSVSPEPQPPPPGFLSYGAQLLDSAFKQYIPAARRQLVSHYPLLYYGPDLVSLTYAHQLHLPRPPPPTSPVQRPPSPRPPAADHAVSSTTGPTPSPAKNKSFACGDCGKVFNAHYNLTRHMPVHTGARPFVCKICGKGFRQASTLCRHKIIHTSEKPHKCLTCGKAFNRSSTLNTHARIHAGYKPFVCEFCGKGFHQKGNYKNHRLTHSGEKAYKCSICNKAFHQIYNLTFHMHTHNERKPFTCSICAKGFCRNFDLKKHTRKLHLGAGSSNNGDSSLDTQDESTQEATSSPVEDASRVAFRPFLGASYPRILDPSRMTAPNNFFSKLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00785466;
90% Identity: iTF_00273889;
80% Identity: -