Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_947578425.1
Location
OX387979.1:7367370-7369802[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 6.1 6.9e+03 -2.1 0.0 4 18 169 183 167 184 0.90
2 5 2e-07 0.00022 21.9 0.1 2 45 273 318 272 319 0.85
3 5 3.9e-09 4.3e-06 27.4 0.1 3 44 327 372 325 374 0.93
4 5 6.7e-10 7.5e-07 29.8 0.0 1 43 378 420 378 422 0.97
5 5 0.00055 0.62 10.8 0.0 3 45 430 474 428 475 0.89

Sequence Information

Coding Sequence
ATGGATGTTGATACAATCGTGGAGAACTTTGAGACCGACTCAGAAGTTGACGAGAGCGAGGGCGATGAAGGTTCGATTTTGGAAGCTGAAACTATGAGTCAGCTAACTGAGTTCGTGGACGATGATGACTTACTCAGTGCGGGGAGGTGGCGTTGCCACCGCACAGGGGCTAAACGAACTCCCAGTGTCTTTAAAGAAAAAAGTAAATCATCAGTAGCGGTAGCTCAAATAAATCTAGCTTTGTCGGCAAACAAATTATTAGATGAAAAGCTGGAGAGATTGGAGAGAGTTCTCCTGTCACGTCTAAATGAGTGTCGACAGAAACTAAAACTGGTACAAGACAGTGATGGTACACAGAATGACAAAAATGAAATTTTCCGCTACGTCAGTTGTGGTAGACCCTACTTTAAGGACCGACAGAACTTCCCAGCACCAGATAATGAAGATGCTAAAATGGCAAAATCTCAGATGTATGACTTTTCCTTAGTAATTTCAGCACCAGGGTGGACAGTCAAAGACAAATCTCAATTGGTTAGTATGATCCACAAGATGTCAATCGATATTAAAAAAAAAGAGCTGTACGACCAAATTACTGAGTTGAAACGCTCAAATAAACCAAGTAAAGATGTGGAAAGAGAAGTAATGGCCATTAGAAAAGAAATTGACAGAGTAACTAAATTGCCTTTGAGTAAAGTAGCTCTTCCCTTAGATCAGGAATATGACTGGGAAATGTTAACAAACAAGTTAAACAGGAGGCACACAGCACACGAGTATCTAGCCCTCTGGAAGTTATTTTTTCATCCTTCAATTAGCAAAAATGGATGGGGCACCGCTGAACATGCCACATTGCAGAAAATTGCTCTCCGGCATTGTAAACAAGATTGGGATAAAATTGCTAGTGAACTTAACACTGGCAGGACTGGGTATCAGTGTTTTGTATACTTTCGGACAAATATGAGTAACTCGTTTACTGGAACTAAATGGACTCCTGAGGAGATAACATACCTTAAAAGATTGATAGAATATTACAAAGAGGATAATTACATTCCATGGGGAAAGATAGCTGCAGCAATGGAAAACCGAACCAAAATCCAAATCTATAATAAGTATATAAGACTCATTGAACAAAGGAAAGGCAGGTTTCTCGCTGAAGAAGATGCGGTTATTCTTAATTGTGTGGAGAGATTTGGAACTAATTTTAGGAAGATGACAGCTTTTTTACCTGGTCGATCTATGATCCAAATTCGTGCCAGATATCAAGTTTTGAGCAAAATGAGAGTGTCAACTGTGTGGACTGTTGAAGACGATAAGAAACTTGTACAGTTGATGTCCAACCCAGAGTCAACCATAAACTTTTCAACAGCTACACAATTTTTTCCAGGCAGAAACAGAACAAAAATTAGATCTAGATTTGTTACCTTAGTTAAATGGATGAAGAAACATCCACATTTAGATTTAGAACATGCACCACGACGAGGTGCACGACGTTTGAATCATGGGCAAGCCAGTGAAAACCTGAATGATGCAGTAGAGAATTTAAAAAATTCGTTGATTACATCAGTCCAAAATAGGGCTAAGAAAAAGAGGCTAACTGAAGAGTCCACACACAAAGACTTAAATGATGCTATTGTTGTGATCATTGTGAATTGTGTAATAAAGGAAAAAGAAGCAGAAGCCAAGAAAGGTAATCCAGAAGATTATCAAATAGTTTTAGGTCCTGATCATGTTGTCTCATTTGCAGACTTAAATATCACAAACCTGCGCAAAATTATTATATATTTAAACGCTTGTCTAGATGAGGCTAGTTATATGGACAGCATCTACATAGAAGACTATCCAAGTTTAGGCGACAGTAATCATGATGTTTCTTTGGTTAGAGTCAAATCTTATTCTCGGAAGACGTCCAACAAACCTGTAATGGTTTCTGAAGGTCCTAATGTTTGGGGAACTCCTACGCTTTTTCAACGGATGGGAAATATGTTAAGCCAACGAAGCTATGTGTTGCCTCCACAACTGGCAACTATAACTGGTGTTAGATCAATTATGTCATGTGTGATGTTAAATGGTCCATACACTGAAAATATAAACCTACATGTACTTAGCAAGCGGAACATATTATTGAAAGAGTGTTTAGCTCTGGCTCTTGATCGCTTCTATGTTTTGTTCACATGGCCTATGATCTTATCAAATGAATTGCCTAGTGAATATACTGTGTCAACTGCACCAAGAACCAATTCTGTTTTTGCCAGACCACCAACATTGCCAACTGCGCCTGAAGTTACAATTAATGTGAAATGTATAAAGAAATATAAAAATAAAAACGTCACAGAAATAATTGATCTGGATGAAGATGTGGCTAAGAAAAATGATGAAGTTGTTGAGGTGCAAATAGGTGCAGACGATAAGACAGAACCACAACTCTTTGATGACTAG
Protein Sequence
MDVDTIVENFETDSEVDESEGDEGSILEAETMSQLTEFVDDDDLLSAGRWRCHRTGAKRTPSVFKEKSKSSVAVAQINLALSANKLLDEKLERLERVLLSRLNECRQKLKLVQDSDGTQNDKNEIFRYVSCGRPYFKDRQNFPAPDNEDAKMAKSQMYDFSLVISAPGWTVKDKSQLVSMIHKMSIDIKKKELYDQITELKRSNKPSKDVEREVMAIRKEIDRVTKLPLSKVALPLDQEYDWEMLTNKLNRRHTAHEYLALWKLFFHPSISKNGWGTAEHATLQKIALRHCKQDWDKIASELNTGRTGYQCFVYFRTNMSNSFTGTKWTPEEITYLKRLIEYYKEDNYIPWGKIAAAMENRTKIQIYNKYIRLIEQRKGRFLAEEDAVILNCVERFGTNFRKMTAFLPGRSMIQIRARYQVLSKMRVSTVWTVEDDKKLVQLMSNPESTINFSTATQFFPGRNRTKIRSRFVTLVKWMKKHPHLDLEHAPRRGARRLNHGQASENLNDAVENLKNSLITSVQNRAKKKRLTEESTHKDLNDAIVVIIVNCVIKEKEAEAKKGNPEDYQIVLGPDHVVSFADLNITNLRKIIIYLNACLDEASYMDSIYIEDYPSLGDSNHDVSLVRVKSYSRKTSNKPVMVSEGPNVWGTPTLFQRMGNMLSQRSYVLPPQLATITGVRSIMSCVMLNGPYTENINLHVLSKRNILLKECLALALDRFYVLFTWPMILSNELPSEYTVSTAPRTNSVFARPPTLPTAPEVTINVKCIKKYKNKNVTEIIDLDEDVAKKNDEVVEVQIGADDKTEPQLFDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01084202;
90% Identity
iTF_00928634;
80% Identity
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