Egla024067.1
Basic Information
- Insect
- Eugnorisma glareosa
- Gene Symbol
- -
- Assembly
- GCA_947578425.1
- Location
- OX387965.1:5547244-5549495[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6e-09 3.5e-06 27.2 0.0 1 40 20 59 20 60 0.94
Sequence Information
- Coding Sequence
- ATGGAGCTCCCATATAAATCCGAGTCAGCAAAAAATAAAAAAAGGACTGTCCAGTACACTGAAGAAGCCCTGATAAAAGCTCTCCATGACATTCGAAAAAAAGGAAAGGGAATAAGAGAAACATGTAGACTGTATCAGATCCCAAGGACCACGATACAAGATCGGCTTAGTGGGAAGAGGTGTGATACAATCGAGACAAGGGGACCAGATCCTGTATTGGGTATAGAAGGCGAGAAACAAATTAAAGAGTGGCTTTTGGACATAGCTAAATGCGGATTCCCGGTCAAGAAACAGGAGCTGTTGGGCACAGTACAGAAAATTGTTAAAGATCATGGAACAAAGAATCCTTTTAAGGATGATCGTCCGGGGCAAACCTGGTACTCAAATTTCCTAAAACGCCATCCCGATATATCATGCCATGCTGCCGAAGGAATTAATAAAGCTAGAGCGAGAGTAACTGAAGAAGCCATACGCGCTTGGTTCAATGATTTGAAAGAGTTCTTGGAACAAACTAATAATCAAGATATATTAGAATGCCCAGAGcgcatatttaatggtgatgaaagcagcttctctatgtgtccaaaaaccggaaaggtcttagcaccgaagggataccgaaatttataccagatcaaagcgggaaatgaaaaggataacttaactgttctgatcacctttaacgccagtggccaagtaagtccaccgctcattgtttttccctatatacgtccaccacgagccgttgtagagagcatgcctgaagaatggtgtcttggcaaatctgaaaatggatggatgcgctcggatgtattttttgaatatatcacaaacgattttaatagttgggtggaccgcaacagtataaaaaaacctatattactgctaatcgatggtcacaagtcgcacatgtcactggtcttgagtgctatgtgcgaaaagctcggcataattttgtatgctctacccccaaacaccacccatatgctacagccagcagacgtaagcgtttctgctccattaaagtcttcatggaaagcggtcgtcagaaaatttctatcgaaaccagaaaacataaattcgtgcgttagcaaaaccaacttttgtcagttgttccgtgacacgctgaaagacacgaacatggctacaaatataaaaaacggattcagaaaatgtggactatatccgtttaattccgatgctgtggattacagtaaatgtgtacaaaataccctcaagaatgttcacaaagaACTGGCGAATCCGTCAAAGGACATAACGAATACGGATCTTGCTAGTACAAGAAAGGTACTAAAACATCTGAGACCAGTACTTAAACAAAAAAAGATTAATGTCAGTGTTATTTTGAAAGAACTGCGTAAATTAAAAACAAAGACTGGAAATCACGAAACCGATTCTGAAGATATAACAGACAATTCAGTTGATCAGTCCACATCCCTTCAAATGGAATATTCTGTTGAGGGTGTTCCAGTAACTGATCCATCATTGCCGATTTTGACTAACATCCCAGACGTTCATTCCGTCTCTCCGCACATTTTGCAAAAGCCTAGTAATCCCGAAGTAGCGAGCGTCACGAATGAACAGATACGTATTTCAAATAAGTTGATACCAGAGCCCGTTAGCCAAAACACATTTGAGGAGATTTTACCATTTCCTGATGAAGATATAATAAGGGCTAGGCAAGATCCGACACTTAATGACATTTTACTCACGCTTAATTTAGCCGAAGTACCAGGAGCCACAATGGGAATGTTGGGTACAATTTCATCACATACTACAAAAGAAATACCAATTGACATAGGCGAAAATGTGACAGTGTGTGTATGTTTAACTGGAACGGATGTAGATAGTTACTTAGAAGTCGGATCATTAGGTCCCTGGATGGATGTGGTCGTCATACCTACTCCCAAAAATATGGCAATGTTGGATACTGGGGCTTTCAGCAAACATTTGTTTATACCTGATACACCACAACGCGCTCAACCAAAACAATTAAAAACACCTTCTGCCATATCATCTGGGGCATGGCGAAAATTTTACGAAGAAAAAGAAATTTTAAAGACTGAAAAACAGGTGGCTACATTAAAGAGAAAACAAGATAGAGCAGAAGCAGTAAAGCAGAAGAAATGA
- Protein Sequence
- MELPYKSESAKNKKRTVQYTEEALIKALHDIRKKGKGIRETCRLYQIPRTTIQDRLSGKRCDTIETRGPDPVLGIEGEKQIKEWLLDIAKCGFPVKKQELLGTVQKIVKDHGTKNPFKDDRPGQTWYSNFLKRHPDISCHAAEGINKARARVTEEAIRAWFNDLKEFLEQTNNQDILECPERIFNGDESSFSMCPKTGKVLAPKGYRNLYQIKAGNEKDNLTVLITFNASGQVSPPLIVFPYIRPPRAVVESMPEEWCLGKSENGWMRSDVFFEYITNDFNSWVDRNSIKKPILLLIDGHKSHMSLVLSAMCEKLGIILYALPPNTTHMLQPADVSVSAPLKSSWKAVVRKFLSKPENINSCVSKTNFCQLFRDTLKDTNMATNIKNGFRKCGLYPFNSDAVDYSKCVQNTLKNVHKELANPSKDITNTDLASTRKVLKHLRPVLKQKKINVSVILKELRKLKTKTGNHETDSEDITDNSVDQSTSLQMEYSVEGVPVTDPSLPILTNIPDVHSVSPHILQKPSNPEVASVTNEQIRISNKLIPEPVSQNTFEEILPFPDEDIIRARQDPTLNDILLTLNLAEVPGATMGMLGTISSHTTKEIPIDIGENVTVCVCLTGTDVDSYLEVGSLGPWMDVVVIPTPKNMAMLDTGAFSKHLFIPDTPQRAQPKQLKTPSAISSGAWRKFYEEKEILKTEKQVATLKRKQDRAEAVKQKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00407518;
- 90% Identity
- -
- 80% Identity
- -