Basic Information

Gene Symbol
kn
Assembly
GCA_947578425.1
Location
OX387971.1:6959743-6975236[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.2e-19 7.3e-15 54.9 4.5 182 213 4 35 1 35 0.94
2 3 3.9e-64 5.4e-60 203.9 0.2 294 387 32 125 31 128 0.99
3 3 0.00012 1.7 7.5 0.4 419 467 133 185 126 194 0.61

Sequence Information

Coding Sequence
ATGAACTACAGGTTTTTCTTGAAGTTCTTCCTGAAATGCAACCAGAATTGTTTGAAGAATGCCGGGAACCCCAGAGATATGAGAAGGTTTCAGTTAATAACATCCCACGCGATAAGAGTACAGACCCCGCCGCGTCACATACCGGGCGTCGTGGAGGTGACGCTGTCTTACAAGAGCAAGCAGTTCTGTAAGGGCGCGCCGGGGCGATTTGTTTATGTTTCGTTGAACGAGCCAACGATAGATTACGGCTTTCAGAGGCTACAGAAACTTATACCAAGACATCCCGGGGACCCGGAAAAATTACCTAAGGAAATAATCCTAAAGCGAGCGGCGGACTTGGCGGAGGCACTGTACTCGATGCCTCGCAACAACCAACTGGGGTTAGGCGCACCGCGGTCACCGCCTGCGAGCATGCCTTTCAACTCATACACAGGACAACTAGCGGTCAGCGTACAGGATACTGCGGCCTCGCAGTGGACTGAAGGAATGGGCGGCTTAGTATCATCGCCGTTCAGTGTCAACCCCTTCTCGCTGCCAACTTGCAGCGCTCAACAGTATGCTCAGACAGCTCCGCTCGCATCCAAGTAG
Protein Sequence
MNYRFFLKFFLKCNQNCLKNAGNPRDMRRFQLITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEGMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00142826;
90% Identity
iTF_00142826;
80% Identity
iTF_00685163;