Basic Information

Gene Symbol
arid5b
Assembly
GCA_947578425.1
Location
OX387983.1:12115593-12133159[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.1e-14 1.1e-10 42.4 0.0 3 89 232 305 230 305 0.90

Sequence Information

Coding Sequence
ATGGACGAATTTGTACATGAGGACGAAGTCCTAGCCATCAACGACAAGGTAGTACTCCGCGCCGACGACCTGCTCTCGTGGATGTGCGTGGGCACGGAGTGGCGCTGGGGTCTCCGGGCGGTGTGGCGCGGCGCCTGCGCTCCCCCCGCCGACATGCCCCGGCACGCGCCGCTCACACACACCAAGCTGGACTTCAGTGATGTGGATACCGAGAAGAGTGCTATTGTGGTGGACGCAGACGCGCCAGGCGTGGTAGTCTTCTCATACCCGCGTTACTGCCGCTACAGGGCGCTCATAGCCAGGCTTGAAGGCATCCAGGCTTCCTGGCTAAGAGACTCCTTGGTCGCAGCCCTAGGAGGGTACGCGGCGCCGACCAGTAACACCAGGATACTGTACTGCAAGGACACATTCGAGTACCCCGAGCTAGAAGGGCACGAGTTCGTCTGCAACCACCTCGCGCCGCGGCTGAAGGGCAGGCCGCGCGGGCGCCGGCGCCGCGCGCACTCGCCCGACCTGTCGCACGCGCACGACGAGCGCGGCTCCGAGCGCTCGGACTCCGACGAGCCGCCGGCGACGGGACCCGCTAGTGCTGACCCGCCGACCCCCCGGCGCCTGTCCCTCCGCAACGGCGCGCCCCCCCCCAGCGACGAGGACGACGAGGAGTACCGGCGCGTGGAGCAGTCCCCGGAGGACCGCGCCTTCCTGCAGCAGCTCAAGATATTCTACAAGAGTAGGAGCGAGCCCTTCAAGAGCGGACATACGCTCAAGCATCTATCTCTCCGCGCGCTGTACCTGTCGGTGGTGTCTCGCGGCGGGTACGAGGCGGTGTGCCGACACAAGCTGTGGCGCGCGCTGGCGCGGGACCAGCCCGCCCGCACCAGGAGGCACTACGAGAGATTCCTCCTGCCCTTCGAGAACCACGAGAGGCGCAACGGCACCTCCCTCTCTTTCAAACTGAACGGAAAGCTGGACGCGGAGCCGCGAACCATCGCCACCATCGACGTCACAGACTCTCCCAGACGAGATGACGACGACAAGATCCTCCGCACCCCCTCACCTGCCCCCAAACTCGACAATTACGACAAACTCGGAATCCCGGATATCGACAGTGAAACCGGAGAAATAACCACCAAAGATGATATCATAATTAAAAATGCTGAAGAGCTAAATAGGGAATTCTTGGATTCGCTGCCCAAAGAAGAGAAGATGGTGAAGATTTCTGTGAAGCCGGTCGAGAAGCTGATTGAGCCGGCTCGTGTCGAGGGTGTGGCGAAGATGGAGGTTCAGAAAGAGGAGAGGGATTTTAGTCAGAACTATTTGGGGGACTTGCAGAAATTTAGTATGGGAGCGGAGTCTCTCTCGTCTCGCGCGACTCCTCTCAACGGTCACGCTGCGCCTGCGCCCACAGACCTTAAGACGTCCCGCCCCGCCGGCCGCAGCTCGCTGCGCGCCGTGCGCGTGAAGCCGGCGCGTGCGCAGCTCACGCCCGCCAGCACACCGCCCGGTCCGGGTCAGGCGGGTCAGACGGGGGCGGCGGGGACGGCGGGGGCGGTGTCTCCGCCGGTCACAAACTTCGGCATCCACCGGCCGCCGCCGCACAACGCGCACATAGACGACGACATCATGGAGGTCCCCTACAAGCCGAAAAGCCCAGAAATCATCGATCTAGACGAATACCCAGAGAGTCCTCAAGCAGTAAAGAAGAAGAAACTAGACATTCTGAAGGAACGAGGACTGGAAGTGACAGCTCTCCCGCCCCCCTGGCAGGGAGTGGGCCCCATGATGGCCCCGCCGATGATCCTCAACCCCGCAGTACAGCATCAGATCATGACTCAAGCGCAGCTGTTCCAGATGTACAACATCATACCTCCCAACTATGCCAACGGGATCCAGCCTCCTAAGGTCATCCAGGCGTCTTCTATCTTCGGTAACACAGGGCCTGAGAAGACTGTCTACGGGAACCCTAAAGACCCCTTCATGCCACCCCCCCATGTTCTGCACGGGGTACCAGTGAAGCCGTTAAAAACTGCCCCTCCTCCGGCCATTCCTCAGGATATATTAGACCTTACCTGCAAGTCCTCTAGCCCTCCTCCACAGAAACCTGCCGTGGAGATAGTAAGAGTACCTCCCTCTCAATCTCCAACTGCGCAGAACTTGACAAAGAATTACACCTTAGTCGATGGTAAAGCTGTTGTGGGCTCGAATTTAGAAATAACTTTAGTGAACAAAGCTCAGAGTCCAGGCAAAAATAGGCCTCCGCAGAAGAGATCTAGCAACGGAAAGTTCATGTCAGCGAAAACTGGTACCCCGCCTAAGGAATCCTACCCCAAGTACACCTCTCCTGGCACAGCCACTCAAAAGAAACCCCCTATCAACATCCCCAGCTACCAGATCAGGGAAGACTCCTCTCCCACCCAGAATCAAGTACTACAAAACGCAATGAAGAATCAGAACATAGCTCAAATAATGGATTTGCAGAAGAACTCAGTTCCTATGACCTCTTTCATGGACCCTTACGTCGCTTTATACAGTAGTTTAGCGGGCCAAATGGACCAGAGACAGCTGGCCATGTACCGGGACCTGATGACCAATCAGTTTAGATATCCAGGGCTGCTGAACCTGGGGGTCGCCACACCGACAACGAAGAATTAG
Protein Sequence
MDEFVHEDEVLAINDKVVLRADDLLSWMCVGTEWRWGLRAVWRGACAPPADMPRHAPLTHTKLDFSDVDTEKSAIVVDADAPGVVVFSYPRYCRYRALIARLEGIQASWLRDSLVAALGGYAAPTSNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAHSPDLSHAHDERGSERSDSDEPPATGPASADPPTPRRLSLRNGAPPPSDEDDEEYRRVEQSPEDRAFLQQLKIFYKSRSEPFKSGHTLKHLSLRALYLSVVSRGGYEAVCRHKLWRALARDQPARTRRHYERFLLPFENHERRNGTSLSFKLNGKLDAEPRTIATIDVTDSPRRDDDDKILRTPSPAPKLDNYDKLGIPDIDSETGEITTKDDIIIKNAEELNREFLDSLPKEEKMVKISVKPVEKLIEPARVEGVAKMEVQKEERDFSQNYLGDLQKFSMGAESLSSRATPLNGHAAPAPTDLKTSRPAGRSSLRAVRVKPARAQLTPASTPPGPGQAGQTGAAGTAGAVSPPVTNFGIHRPPPHNAHIDDDIMEVPYKPKSPEIIDLDEYPESPQAVKKKKLDILKERGLEVTALPPPWQGVGPMMAPPMILNPAVQHQIMTQAQLFQMYNIIPPNYANGIQPPKVIQASSIFGNTGPEKTVYGNPKDPFMPPPHVLHGVPVKPLKTAPPPAIPQDILDLTCKSSSPPPQKPAVEIVRVPPSQSPTAQNLTKNYTLVDGKAVVGSNLEITLVNKAQSPGKNRPPQKRSSNGKFMSAKTGTPPKESYPKYTSPGTATQKKPPINIPSYQIREDSSPTQNQVLQNAMKNQNIAQIMDLQKNSVPMTSFMDPYVALYSSLAGQMDQRQLAMYRDLMTNQFRYPGLLNLGVATPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00374957;
90% Identity
iTF_00711598;
80% Identity
-