Basic Information

Gene Symbol
Kdm5
Assembly
GCA_947578425.1
Location
OX387969.1:10001899-10004334[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.9e-23 3.1e-19 69.8 0.1 3 89 94 176 92 176 0.92

Sequence Information

Coding Sequence
ATGGATTGCAAGAACATACAGAAAAATGCCATGCAAAAAAGTGCAGAATTCACTTTCACTCCGCCACCTGAAGCACCCGTTTTTGAACCAACGCCCGAAGAATTCTTGGATCCACTTGGATATATTGATAAAATCCGCCCACTTGCAGAGAAAACGGGCATCTGCAAAATAAAGCCTCCGTCACGCTGGCAGCCACCGTTTTCATTAGACGTGGACAAATTAAAATTTGTTCCGAGGATACAGAAACTGAACGAATTGGAAGCCATCACGCGTCTAAAACTTTTGTTCCTTGAGAAAATTTTAAAGTTTTGGGAGCTTCAAGGAGCGCCACTAAAAATTCCAATGATTGAAAACAAAACATTAGATTTGTACTGTCTCAAATTTTGGGTAGATGAAGAGGGCGGTTTTGAAGCCTGTAATACTCCTAAAAAATGGCGTAGGATTGCTAATGCAATGGGTTACAGTCAGCACATGGGTACCATGAATTTTCTAAAAAGTAATTATGAAAAAATTTTGCTGCCCTATGAAATATTTGAAAAAAGTAAGGCAGATATATTAAAAACTGTCAAGAAGACTGACCCCAAAATCGAAATGAAAGAAGATGATGTTGGGAAACCGCAGATTACAGAAGTACCTATAGAAAGGATAACCAAGATCAAAGTAGAATACAAAGAAGATAAACCACACACAAGTATTAAAAAAACAAAGACAGGATCTGATATCAAACTTGATATTGATAGCCCGAAGAACAAAGTTGAGTGTGAAGAGATAAAACACAACAGAGAACTAAGAAGGTTAGCTTGCTATGGACCTGGACCGAAAATGCCAGGACTAAATGATGAAGAATTTGACATTACAAAATCAAGGAAGAGGCCCCGCTATGATCTTGATCCATTAGCAGTCTATCAGTGTGCTATGTGCCAAAAAGATTATAGAGATGATTTGCTGTTAATTTGCAATGGTTGTTCTGAAACTTATCATACATTTTGTTTGAAACCTCCTATAAATGCTGTACCAGATGGGGACTGGCGTTGTCCATGTTGTATTGCTGAGGAGGTTCATAAACCTGCTGAAGCATTTGGGTTTGCTCAGGCAGAAAGAGAATACACGCTGCAACAATTTGGAGAAATGGCAGATAAATTTAAATCTGACTATTTTGCCATGTCAGGGCATTTGGTTCCGACGACAGTAGCTGAAAAGGAGTTTTGGAGGATTATTTCTTCAGTGGAGGAAGATGTAACTGTAGAGTATGGTGCTGATCTACACTCAATGGATCATGGATCAGGTTTTCCAACTAAATCATCACTAAATCTTTATCCCGGTGATCAAGAGTATGTAGATTCTGGATGGAATTTGAACAATCTGCCTGTTCTAGATGGTTCAGTTTTAAGATTTATAAATGCTGATATATCTGGCATGACTGTGCCTTGGATGTATGTTGGTATGTGCTTTTCTGCATTTTGTTGGCATAACGAAGACCATTGGAGTTATTCAATTAATTATTTACATTGGGGTGAGGCCAAAACTTGGTATGGAGTGCCAGGCAGTGGTGCAGAATTATTGGAATCGGCAATGAAGGCAGCGGCACCAGATCTATTTAAATCACAACCAGATTTATTACACCAACTTGTCACAATAATGAATCCAAATATTTTAATGGCAGCTGGGGTGCCTATTTATAGAACTGATCAACACGCTGGAGAGTTTGTGGTCACATTTCCCAGAGCATACCATGCAGGTTTTAACCAAGGGTATAACTTCGCTGAAGCTGTAAATTTTGCTCCACCTGACTGGCTGAAAATTGGACGTGAGTGTATAACACATTACAAAAATCTGAAAAGGTTCTGTGTCTTCTCCCATGATGAATTGATTTGTAAAATGGCATTAGAAGGTGATCGGTTAGATTTGGAAACTGCACTAGAAACACAAAGAGAATTAATGAAAGCCACAGAAGAAGAAGGCACTTTGAGAGCTTTGATAGCTAAAAAAGGTCTGAAGAGTGTATCTAGGACTGCATTTGAGTTACTTGGTGATGATGAACGGCTTTGTGAAGTGTGTAAAACAACATGTTTCCTATCTTCAGTGTCATGTAGCGATTGTAAACACATGGTTTGTCTGCAGCATATAAGTAACTTATGCCAATGCCCTCTAGAGAAAAAGTCATTAAACTATCGTTATGATATGGATGAGCTGGGGATTATGCTACAGACTTTAGATTTTAGAGTCAATAGTTTTGACAAGTGGATGAAAGGGGCTAAGAACATACTACTTCCCACTGCTCCTGACATTGGGAGACTCCAAAAGCTAAAAGTTTTGATAGATGAAGCGGAAGAGCTTAAAATACCAAAGTGTGCATTGTTATCACAATTAAAAGAAGAGTATACAAAAGCAACAGAAAATGTTGAACCAATAGTTATAGAATTAGATGATGATTGA
Protein Sequence
MDCKNIQKNAMQKSAEFTFTPPPEAPVFEPTPEEFLDPLGYIDKIRPLAEKTGICKIKPPSRWQPPFSLDVDKLKFVPRIQKLNELEAITRLKLLFLEKILKFWELQGAPLKIPMIENKTLDLYCLKFWVDEEGGFEACNTPKKWRRIANAMGYSQHMGTMNFLKSNYEKILLPYEIFEKSKADILKTVKKTDPKIEMKEDDVGKPQITEVPIERITKIKVEYKEDKPHTSIKKTKTGSDIKLDIDSPKNKVECEEIKHNRELRRLACYGPGPKMPGLNDEEFDITKSRKRPRYDLDPLAVYQCAMCQKDYRDDLLLICNGCSETYHTFCLKPPINAVPDGDWRCPCCIAEEVHKPAEAFGFAQAEREYTLQQFGEMADKFKSDYFAMSGHLVPTTVAEKEFWRIISSVEEDVTVEYGADLHSMDHGSGFPTKSSLNLYPGDQEYVDSGWNLNNLPVLDGSVLRFINADISGMTVPWMYVGMCFSAFCWHNEDHWSYSINYLHWGEAKTWYGVPGSGAELLESAMKAAAPDLFKSQPDLLHQLVTIMNPNILMAAGVPIYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPPDWLKIGRECITHYKNLKRFCVFSHDELICKMALEGDRLDLETALETQRELMKATEEEGTLRALIAKKGLKSVSRTAFELLGDDERLCEVCKTTCFLSSVSCSDCKHMVCLQHISNLCQCPLEKKSLNYRYDMDELGIMLQTLDFRVNSFDKWMKGAKNILLPTAPDIGRLQKLKVLIDEAEELKIPKCALLSQLKEEYTKATENVEPIVIELDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01487498;
90% Identity
iTF_00783207;
80% Identity
-