Basic Information

Insect: Euglossa dilemma
Gene Symbol: zfh1
Assembly: GCA_002201625.1
Location: NIJG01000107.1:411322-445439[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 1.2 92 3.6 1.7 2 23 87 109 87 109 0.90

2 7 2.1e-05 0.0016 18.6 0.6 2 23 128 149 127 149 0.97

3 7 5e-06 0.00037 20.5 7.8 1 23 158 180 158 180 0.99

4 7 1.2e-05 0.00093 19.3 1.9 1 21 186 206 186 207 0.95

5 7 0.0002 0.015 15.5 4.5 1 23 652 674 652 674 0.94

6 7 8.4e-05 0.0063 16.7 7.5 1 23 680 702 680 702 0.98

7 7 0.0013 0.099 12.9 4.3 1 21 708 728 708 729 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	1.2	92	3.6	1.7	2	23	87	109	87	109	0.90
2	7	2.1e-05	0.0016	18.6	0.6	2	23	128	149	127	149	0.97
3	7	5e-06	0.00037	20.5	7.8	1	23	158	180	158	180	0.99
4	7	1.2e-05	0.00093	19.3	1.9	1	21	186	206	186	207	0.95
5	7	0.0002	0.015	15.5	4.5	1	23	652	674	652	674	0.94
6	7	8.4e-05	0.0063	16.7	7.5	1	23	680	702	680	702	0.98
7	7	0.0013	0.099	12.9	4.3	1	21	708	728	708	729	0.96

Sequence Information

Coding Sequence: ATGAGCATGACTCTCGTCCGGAATACGTTCAAAGGTTGCAGCGAGGACGAGGCAGCAGGTGTCGTGAACGCGGAGGTGGGCGGAGGTTGCTTGGCCGGGGCGCCAACCACAGGAAGTGGCGGTGGAGGTGGTAGCGGGACAGGTAGCGAGTCCGGTGGTGGTGGTGCAGGCGGTGGTGGAGCAGGAACAGGAACCGGAGGAGGCGGCCGTGGCGGCGGCGGCGGTGGCGAGGGCGGATCGACGAAGCAGGGTGGCGAGAGGTGTCCACAGTGCGGCTTCCTCTGTCGGGACGTCCACGTGCTTCAGCTCCATCTCGAGGACACGCACAAGACCTCCTACGCCATCGACAAGAACGATCTCAACGCTCAATTCCCCCAAGTGTCCTGCAAGGTGTGCAGCAAGACCTTTGCTAACGTCTACCGACTCCAGAGGCACATGATCAGCCATGATGAGAGTGCCGTGCTTCGTAAGTTTAAGTGTCCCCATTGCGAGAAAGCCTTCAAGTTTAAGCATCACCTCAAGGAGCACCTTCGCATCCATAGCGGTGAAAAGCCATTCCAATGCAACAACTGCGGCAAACGTTTCTCCCATTCGGGCTCGTATTCGAGTCACATGACCTCGAAGAAGTGCCTGATAGTGAACTTAAAGAAATCCAGGCATACGAATGTGAGCAACGTGGATCGCGGCCCGAAAAAGGCGCAACAACCCCTGCCGCCGGGACGGCGCGAGGTCGATCTGCTCGCGGCGAATAATAACACTTTCCTCCCTATTCTGCCGAAGCTTTCACCCTCGGATTATCAGGAGATACAACGGGAAGGAGCGGGTATTTACGATATGCCGACCCTCCTGCCGCAAATGATGGGCTTCGGCAGCTACTTTCTGCAGGCGTCCTTGGGCAAAATCTTAAATCAGCTACATTCCAAGAGATTGGACGAGGTAGCCGAGCAATTCGAGTCTCATCGGGAGCTTATGAGCCCGTCCACCGCGGACTCCGAGGGCACAGAGGGCACCGAGGGTAAGGAATCACCGGCGCCGGCCGATCCTCAGGGTCTCGACGCGGTTCGACGTATCCTCGAAACGGTGAACACCTCTGTCACGAAGCAGCTGCTCGAGGCGAACGTACGAAAATTGTCCACCTCGCCAGCCACGATGAAACGGGAGTTCGAGGAGGACTATCAAGATCAAGACAGCGAGATGTCCAGCGAGATGGCACACTATCCAGACTGGTCGGCGACGGATCAATATGATTCGCAGAGCGAAGGTTTAGCAGCGAAACTCGAAGACGTGAATCAGCCCAGCGCGAAATCGGGTTACAAGAGAAAAACAGAAGACAGCTCGGAGGCGGACTCGGAGGACGAGGAGGATGGTACACAGACGCACAACGATAACGGGAGGAGAGTTAGGGCTAGATCGTTGATAGACGACGAGCAATTGGCTGTCCTCAAGGGTTACTATGCTATTAATCCTCGACCCAAGAAGGAAGAGATCATCATGATCGCCAACTACATCAATTTTCCTACTCGTGTCGTACAGGTTTGGTTCCAAAACTCCCGGGCGAGGGACCGGCGAGAATCGAAGATACCACCTTTAGTACCGTTGGCAAATCCGACCAGTCAGACCACGTACGAGCAACCATTAGATTTGTCGAAGAAGGAGGCTCTCACGGAATCGGCGTGCAAAGACAATGACACTGTCTGTGTAAAGTACACATCGTCATCGCCCATTGAACACAAGAACGAGAACGCACCGTCGCAAAATCAAGACGCGGATGACCTAGAAGATTCGCCGCTTGTTATCGACGAGGAGACCACCGATTCTGTGGAAACGAAACGTACGGCTACAACCGGGGGAGAAATTGTTCCAAAGAGTCAACCTCAAACAAATGTGAAGAACGAAAACGAAATCGCGAGTCAACCAGAGGCTTCGCCTGCGGCGGAAATCGAGCAGGGTGTCTACTTCTGTGATCGGTGTGACAAAACATTCTCCAAGCACAGTTCCCTAGCAAGACACAAATACGAACATTCCGGGCAAAGGCCGTACAAATGCTTGGAGTGCCCAAGGGCGTTCAAGCACAAGCACCATCTGACCGAACACAAGCGACTGCACAGCGGCGAAAAGCCCTTCCAGTGCTCCAAGTGCCTCAAGCGCTTCTCTCACTCCGGCTCCTACAGCCAACACATGAATCATCGTTTCTCTTACTGCAAGCCGTATAGAGAATAG
Protein Sequence: MSMTLVRNTFKGCSEDEAAGVVNAEVGGGCLAGAPTTGSGGGGGSGTGSESGGGGAGGGGAGTGTGGGGRGGGGGGEGGSTKQGGERCPQCGFLCRDVHVLQLHLEDTHKTSYAIDKNDLNAQFPQVSCKVCSKTFANVYRLQRHMISHDESAVLRKFKCPHCEKAFKFKHHLKEHLRIHSGEKPFQCNNCGKRFSHSGSYSSHMTSKKCLIVNLKKSRHTNVSNVDRGPKKAQQPLPPGRREVDLLAANNNTFLPILPKLSPSDYQEIQREGAGIYDMPTLLPQMMGFGSYFLQASLGKILNQLHSKRLDEVAEQFESHRELMSPSTADSEGTEGTEGKESPAPADPQGLDAVRRILETVNTSVTKQLLEANVRKLSTSPATMKREFEEDYQDQDSEMSSEMAHYPDWSATDQYDSQSEGLAAKLEDVNQPSAKSGYKRKTEDSSEADSEDEEDGTQTHNDNGRRVRARSLIDDEQLAVLKGYYAINPRPKKEEIIMIANYINFPTRVVQVWFQNSRARDRRESKIPPLVPLANPTSQTTYEQPLDLSKKEALTESACKDNDTVCVKYTSSSPIEHKNENAPSQNQDADDLEDSPLVIDEETTDSVETKRTATTGGEIVPKSQPQTNVKNENEIASQPEASPAAEIEQGVYFCDRCDKTFSKHSSLARHKYEHSGQRPYKCLECPRAFKHKHHLTEHKRLHSGEKPFQCSKCLKRFSHSGSYSQHMNHRFSYCKPYRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00086058;
90% Identity: iTF_00982854;
80% Identity: iTF_00684695;