Edil008691.1
Basic Information
- Insect
- Euglossa dilemma
- Gene Symbol
- -
- Assembly
- GCA_002201625.1
- Location
- NIJG01000063.1:930891-939539[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 7.7 5.8e+02 1.1 2.3 2 21 108 127 108 128 0.92 2 20 1.5 1.1e+02 3.3 9.7 3 23 168 189 166 189 0.92 3 20 8.9e-05 0.0066 16.6 2.8 1 23 533 556 533 556 0.95 4 20 0.33 25 5.4 1.6 2 23 589 610 588 610 0.95 5 20 0.00039 0.029 14.6 1.4 1 22 757 778 757 778 0.96 6 20 1.9e-05 0.0014 18.7 0.3 2 23 786 808 785 808 0.94 7 20 0.013 1 9.7 5.9 1 23 818 841 818 841 0.95 8 20 2.3 1.7e+02 2.7 0.2 2 19 861 878 861 881 0.92 9 20 0.018 1.3 9.3 4.3 1 23 888 911 888 911 0.96 10 20 0.0013 0.094 13.0 3.5 1 23 922 945 922 945 0.94 11 20 0.8 60 4.2 0.0 1 20 985 1004 985 1006 0.91 12 20 0.04 3 8.3 2.7 1 23 1013 1036 1013 1036 0.92 13 20 4.6 3.4e+02 1.8 2.4 1 12 1045 1056 1045 1068 0.80 14 20 0.051 3.8 7.9 1.5 1 20 1100 1119 1098 1121 0.91 15 20 0.0056 0.42 10.9 2.0 1 23 1128 1150 1128 1150 0.97 16 20 0.003 0.22 11.8 0.5 1 23 1159 1182 1159 1182 0.92 17 20 4.7e-05 0.0035 17.5 0.3 2 20 1237 1255 1236 1257 0.94 18 20 0.023 1.7 9.0 0.8 1 23 1264 1286 1264 1286 0.98 19 20 0.0044 0.33 11.3 2.5 1 23 1296 1319 1296 1319 0.93 20 20 0.026 1.9 8.8 0.8 1 23 1403 1426 1403 1426 0.96
Sequence Information
- Coding Sequence
- ATGGCTCGAGTTATTGTCTATGTACGTCCTGTTGATGCAGTGTTTATGGATCTAGTGTTGGGTCACAAAATGGATCCTCCCAAATACGGAACAAAAGTAAAAGAAGAGCCATCTGATTCAGACATTAATAGCCAAGATGATTCTGCACTGGTTGATGTAAGTGCGAATGATCAGACTGACATAACAGAAGCTGTGAATAAATCTTCGGATGCACAAAACAGCAAATCTGTGTTGCCACAAGAATCAGCTGATGCGAAAAGTATCACATTGGATGTTGCTAAAGGAGTACATAAACATAAACAGTCTCCAAAGACGGTAAATAGTTGCGATATTTGTTTGTTAAAGTGCCGTAATAGACGTGTGTTGAATTCACATAAGAAATCATACAAGGGTGAGTTCAAATGTAAATTCTGCAATGCACTCTTCGGTGCACAAAAGTTAGTGGATCGTCACGAGAAATTACGTTTGTGTACGAGCAGACTGCGGCTTCCAGGAATTTTTTGTTATTTTTGTAACCGACATTTCTGCAATAAGTTACATTTGCAATCCCATATATTCCACCTACATAATGACGATTTAATGCATTCTACCAAAGTAGCTGAACAGCTCCCTGAAACGCCAGAGACCTCGAATGATACGAGTCTGGTGTCAGTGGAAAGATTAAAAAATCTAGATAACACTATCATAAACAGTCCAAGTAGTTCAATGGATGTTGATTTGCAAAACTTGAATGTTACACAAAACAGTAAAGTCTCCAGTCCAAGTATATCATCCAAGAAAAGTGCAGATGGCACGACTATGGAATACTTAAGCAATTCATGCAATTCTACACCGTCAAAAAGGATGAAGCAGACAATTCTTACAGATTACATTTCGTTGTACAAAGAAAAGCCGAAGGATGAATGCGTTACCCCAGAGAAAGTCGATACTGCGGAAACCGCTTCAGTTTCTAGCAGTTCAGATATGTCTGAGTTACTTAATAATAAGATATCAACGACTTCACAACCATCTCAAATATCTACTCCTAAGCATTCTGAACCTTCTGTGTCACATAACAAAAAGCCATTCGTGCAGATTCATGTGAATTCTAGTACAATGATATCTTTATTAAACAAGGAGATAAAAACCGAACCTGAAAACTTTGATACTTCACTCGATACGTCTTATAATCTTAGGCCAGGAAGGGTCAATTCTTATTCTCCTTACCCTCACAATTTAATCACTTACGAAGCTTCTAGATCTCTTAAGAGAAGAAAGCATCATGATTTGTCTAAACAAACGCAAAGAACATCATTACCAGATAAACAACCGAAATCTGAGTTTAAGTATAAAGAATGCATAATTCGTTTGAAAAGGTGTGATAAAGTTTTAAAATCATGTAGCTATACATCTGATAAAGACGTAGAAGCTTTTGAACGAGTAGACCTAAAAATAGTAAAAGAAGATCCTGAGAATTCTCAGAAAATGGACACGGTAAGTAATTCGTTTCTGACAAATGTGACAGAGAGTACAGAAAAGATTATTACGAGCGAATCGGGAGCTCGAGATGTACCTAAAAACGGCAAACCAGTCGTGAAAGTCAATGAAAAGAAACCATTTCCGTGTCACGTTTGTAAGAAAGCATTTTCCTTGAAGGAGAATCTACATGAACACATGGAGCTGTTTCATTCGATTTATATGTCTAGTATATGCAGCGCGCGTTACACTACTATGAATAAGTTATTAAGTCACTATTTCCGTCAACATATTGTATTGAAACGGAAGGAATGTTGCGTATGCTATGAGAAATTCGAGACATCAGCTATACTGAGGCAACACATGACCTTGCATTGTTTGAAAACCATAAGATCGAAGAAAGATCAAAAAATAGACGTTGAGATAAATTGTAACGCATTCAAGAAACGATACAAGTGTAAAGCCTGCTATAAACGATTTTGGCTACATTCATGTTTGGAACAACACGAGAAAGTGTGCCGAAAGATGAAAGCTTTGGTGGAGAAACAGATGGATAAACAGAAAATTGGCATAAAACGTTCGCTTTCGAACACTCCGAAGGGATTAAATAACTTGAAAGTTAGCCTAACACGATCACCCAATCCAGAAAAAGTGTCGTTAGTACAAACGGCAGAACTCGTGGGAAATTCAGACCCGTGCACGCTTGATACTAATGATACCGTTTCACCAACCCCTACAGTTGTGAATAAGAGGATTCTCGATGGTGTTGCATGCGTAGAAGGTTACGAACCTAATATGACGGATAAAATTAAGTTTCCATGTACCATCTGTGGCAAACAGTTTCAGACATTTCAGAATTTATGTATACACGAGCGGACATTTTGTAAACCAGCCAATAACCAGTGCAATGTTTGCGGCACTTCGTTTCCTACCAAGAGGTTGTTACAACTTCACATGCTTGCGACCCATACACCGGTGTGCGAAGAGAATTACAGGTTTTTCTGTAAGTTTTGTCATCAGGGTTTTGTTAAAAAAGCAAATCTTCGGATTCATGAACGACATTTTCATGCAGGTCAGGTACCTAACTCTATGGTAAACGCGGAATGTATTTGGAATCTTAGTCCAGTATGTAATACGTGTAATTTGTTATTCGAGTCTTACAAACAGTTTATCGAACACAACATGTATTACTATAAGGGCCAGATCTTTGTATGCACGGTATGTAATAAATCGTTCCAAGGTATGTACAGCCTTCATCACCACAACAAGATGGAACATTACGCAGATAACATACGGAAATTGTATGCTTACAAGTGTAACATTTGTAACGAAGGTTTCAATTATGAATCGAATTTTCATGCGCATAAGTTACACGTTCATTTACACGATGCGCCAGTTATACAAAATGCTTTAAATACCATGCAAGATCATAGTTACGCGTTGACGAATAACAGTGTTGTAGCGACCGAGATTCCAATGGAGATATGTTCAAAGAATTACGTGTGCATTGTATGCACTTTAAACTTTACAAATGAGAAAGATCTATTGGTCCACGAAATGGAATATACCATGGGTGGTCAATATCAATGCGACGAATGCAATAGATGCTTCCTTACCAAATCCATCCTCGCCAAGCATTACAGCTTAAATCATACCGGCTGCGACATTAACACCAGTTTCAAGTGTCACACTTGCGGAGAGATAGTAACGACCACCATGGCGATGCTGTGCCACGAGAAACATTTCCACAGGGAGAATAATAATTTTAAAACTAGGTACAGCGTGGTGATAAGCCAGTTGAGTACGTATAAAGAACTCAAGACGTTGATCGACGATTGTAGCTTTACGTGTATAACTTGCGGTATGAAATTCGAAGACAAGATAAGCTTGAAGCATCACTTGTTAGAATTTGCGGATATTGGGCCACACAGCTGTTCCATCTGCCAAAGAAAATTTACCGAACCGTACGTCTTGGAGATGCACAAGCTCAAACACTGTACACTGAACCCTTTGTCCCCGCACCGATGCCCTATATGCAACGAAGGGTTCGCGGATCCTATGAACGTTCATGCACACGTGGCACATCTGCATCGATACGAAACGTTCAGTTTCGATAATTTCTTTAGCACAGGTAACTCTTCTAAAGGTGGTCAGAGTGTGCAAAAGAATTCATCGCATCCATCCAATCGACTGTCCGGGCCATCTGATATTTCCAGGCCGTCTTCCAGTGATCATATCCAGATAGAAATGAAGAAATGTCCCGAATGCAACATTGCATTCAGTAGCAATAAGAATTTAATGAAGCACAGGGCGCGGTTCGTGAATTCTGGGGATTATCAATGCGCAGTATGCGAGCGTAGATTCCCATGGCTGACAACGCTTGAACAGCATATACATAAACACTCGAACGCTAACAGCCCTTTCTTGAAGCACGAATGTCCCCATTGCAACGAGAAATTTCGAAGCTCCGTCGCCGTGTATTCGCATATCATTCATATTCACGGCAAAGACAAATTGTTAACTCACTCGAGTACCGATGTGACTAAGTTTGTAACTAACAACGCTGAGACCACAGTTCCCGTTCCTACCAAGAGTAGTACTTCCGTAAAAGAATCTCAAAATGTACATAATAAAAGCAATACAGCTTTGAACACAACGGATATTCCTCACGCGAAAAGATGTTACGGACCAAGCGAAGGGAAACGGAACGAAGGAGGCACGATATTAGACAGGCTAGAAAAGTCGTTTTACTATACTTGCCTGATATGCAATCTACAATATCCGACGTTGAAGCTATTCCAAACGCATTTTAAGATTATACACGGGAAAAATAACGATCATAGCAAAGCAAACAGAGAGCAGTCTAATGATAGCATTGTTTTACGATATTGCGAGACAATCGACGATAATGACGGGAATGACGTGAAGAATGACGGCAACGGATCGGAGCGTCCTTCCGATGAAAAAGGGCAAGGTCCATCTGACGTTCAGGTTGAATCTACTAATCATCTTGCCCTTCCGCTTAACGATAAGAGCAGTGATGGAATAGAAATTATTTGGGAAAAGAATACGAATCCTATTGATAGGGGAATAAGTAGCGCAAAAATCATGACGCGGCCGGAAGTCCAGGTGACTGACAAAGATGTCGCAAATAATCATGATACTATACCAGCGCCAACTGAAGTAATTCCAATAAACAAAGATGTCGGGAAATTGAAAGTTAGGGCATTCGCAAAATTCGTGGAGGATTAA
- Protein Sequence
- MARVIVYVRPVDAVFMDLVLGHKMDPPKYGTKVKEEPSDSDINSQDDSALVDVSANDQTDITEAVNKSSDAQNSKSVLPQESADAKSITLDVAKGVHKHKQSPKTVNSCDICLLKCRNRRVLNSHKKSYKGEFKCKFCNALFGAQKLVDRHEKLRLCTSRLRLPGIFCYFCNRHFCNKLHLQSHIFHLHNDDLMHSTKVAEQLPETPETSNDTSLVSVERLKNLDNTIINSPSSSMDVDLQNLNVTQNSKVSSPSISSKKSADGTTMEYLSNSCNSTPSKRMKQTILTDYISLYKEKPKDECVTPEKVDTAETASVSSSSDMSELLNNKISTTSQPSQISTPKHSEPSVSHNKKPFVQIHVNSSTMISLLNKEIKTEPENFDTSLDTSYNLRPGRVNSYSPYPHNLITYEASRSLKRRKHHDLSKQTQRTSLPDKQPKSEFKYKECIIRLKRCDKVLKSCSYTSDKDVEAFERVDLKIVKEDPENSQKMDTVSNSFLTNVTESTEKIITSESGARDVPKNGKPVVKVNEKKPFPCHVCKKAFSLKENLHEHMELFHSIYMSSICSARYTTMNKLLSHYFRQHIVLKRKECCVCYEKFETSAILRQHMTLHCLKTIRSKKDQKIDVEINCNAFKKRYKCKACYKRFWLHSCLEQHEKVCRKMKALVEKQMDKQKIGIKRSLSNTPKGLNNLKVSLTRSPNPEKVSLVQTAELVGNSDPCTLDTNDTVSPTPTVVNKRILDGVACVEGYEPNMTDKIKFPCTICGKQFQTFQNLCIHERTFCKPANNQCNVCGTSFPTKRLLQLHMLATHTPVCEENYRFFCKFCHQGFVKKANLRIHERHFHAGQVPNSMVNAECIWNLSPVCNTCNLLFESYKQFIEHNMYYYKGQIFVCTVCNKSFQGMYSLHHHNKMEHYADNIRKLYAYKCNICNEGFNYESNFHAHKLHVHLHDAPVIQNALNTMQDHSYALTNNSVVATEIPMEICSKNYVCIVCTLNFTNEKDLLVHEMEYTMGGQYQCDECNRCFLTKSILAKHYSLNHTGCDINTSFKCHTCGEIVTTTMAMLCHEKHFHRENNNFKTRYSVVISQLSTYKELKTLIDDCSFTCITCGMKFEDKISLKHHLLEFADIGPHSCSICQRKFTEPYVLEMHKLKHCTLNPLSPHRCPICNEGFADPMNVHAHVAHLHRYETFSFDNFFSTGNSSKGGQSVQKNSSHPSNRLSGPSDISRPSSSDHIQIEMKKCPECNIAFSSNKNLMKHRARFVNSGDYQCAVCERRFPWLTTLEQHIHKHSNANSPFLKHECPHCNEKFRSSVAVYSHIIHIHGKDKLLTHSSTDVTKFVTNNAETTVPVPTKSSTSVKESQNVHNKSNTALNTTDIPHAKRCYGPSEGKRNEGGTILDRLEKSFYYTCLICNLQYPTLKLFQTHFKIIHGKNNDHSKANREQSNDSIVLRYCETIDDNDGNDVKNDGNGSERPSDEKGQGPSDVQVESTNHLALPLNDKSSDGIEIIWEKNTNPIDRGISSAKIMTRPEVQVTDKDVANNHDTIPAPTEVIPINKDVGKLKVRAFAKFVED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -