Edil013015.1
Basic Information
- Insect
- Euglossa dilemma
- Gene Symbol
- ZFHX3
- Assembly
- GCA_002201625.1
- Location
- NIJG01000054.1:240936-256957[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.19 14 6.1 0.1 2 23 157 179 156 179 0.91 2 16 0.00015 0.011 15.9 1.8 2 23 404 426 403 426 0.95 3 16 3.7e-05 0.0028 17.8 0.7 1 23 458 482 458 482 0.92 4 16 0.0055 0.41 11.0 0.4 1 22 539 560 539 563 0.91 5 16 5.2 3.9e+02 1.6 0.8 2 20 788 806 787 811 0.88 6 16 2.7 2e+02 2.5 1.5 1 23 835 859 835 859 0.91 7 16 0.047 3.5 8.0 0.1 2 23 952 974 951 974 0.96 8 16 0.07 5.2 7.5 0.1 3 23 995 1016 994 1016 0.95 9 16 0.00087 0.065 13.5 3.5 2 23 1080 1102 1079 1102 0.95 10 16 0.0027 0.2 11.9 1.3 1 23 1119 1141 1119 1141 0.97 11 16 0.00011 0.0084 16.3 0.2 2 23 1148 1170 1147 1170 0.95 12 16 0.0016 0.12 12.7 3.3 1 23 1260 1284 1260 1284 0.91 13 16 0.0043 0.32 11.3 0.6 1 22 1304 1325 1304 1328 0.89 14 16 0.00058 0.044 14.0 0.2 1 23 1369 1393 1369 1393 0.93 15 16 0.067 5 7.5 0.1 2 21 1442 1461 1441 1462 0.94 16 16 0.13 9.7 6.6 2.0 2 19 1607 1624 1606 1629 0.91
Sequence Information
- Coding Sequence
- ATGACCATGCAGTCGCAGGGCCAGCAACAGCAACAACAGGAGCAGCAAGGGCCCAGCCCTAGTCCCAGTCCAACGGGAGGCGACGTGGAGAAGTTCGACGGGAAGATCGTCTACAATCCGGACGGCTCGGCGTATATTATCGAAGGAGAGAGCGAGCTGAGCGAGGATGACTCGTTGCCGGACGGATGTATCGTAGACGGGCGCGGTGTCTCGGTTCCTCATTCCCTGGTCTTTCCTCAAATCGCGAGCGCGTACTACGTCTCGAGATTGTACGCGCACCAGGCCTACCAGCAGCAGCAACAACAGCAGCAACAACGCTCGGCCACGCAGCAGCACAATCCCGATCTTCCCGTGATGCACAGCTATCGGGTGATCAGCTACAGAAGCGCGGAGGGTAGCAAACAACCGCCACCGCCTCCAGCCGCGCCGCCACCTCCGGCTGCCTCGGTTCCCGTCAAGCCTATCCTCATGTGCTTCATATGCAAGCTCAGCTTCGGCTACGCCAAGAGCTTTGTGGCACACGCTCAGGGCGAACATCAGCTGACCCTGATGGAAGACGAGCGACAGATACTCTCTCATTCGACCGCGTCGGCCATCATCCAGGCGGTGGGCAGAGGAAAGCAACCGCTCGTCAGCTTCCTCGAGCCCGTGACCAGCTCCACTTGCCCGCAACCGTCGGCCGCGCAGATGCAGAACCAACAGCAGCAGCAGCGCACCGAATCCACCGATCACGAAACGCCGACCACCACCAGCACGCCTGCCAGCACTCCCGGAGTACCGAGCAGTCCTCAGCAACAGCAACAGCAGCAGCCGCAGAGGCCGTCGCCCAGCACACCCACTACACCCACCTCCCATTCGAGTCATCCTCTCGCGTACAATCATCAGCAACCGCAACAGCATCAGTGGACCGGCGCTCAGGTGAGCGCCGCCTCCTGGGCCAAAGCACCTGACGCCTCCAGCATGCACTACACCTCGCCGCCGCCTCCCACATCCTCCACCAAGGGTTCGCCGTCCTCGTACGCGGCTTTGACCCAGCAGCCACCCAACTTCCTCACAGGCACGACCATCGGTGTCTGCCCGGAGCACATGCAAGGAAGACCGAGCGGAGTCGAGTGCCCGAAATGCGAACTCATCCTAGCCAGCAGCAGACTGGCCGGCCCGGGCGGGCCTCTCGCTGGCATTCACAGCAGGAACTCCTGCAAGACCCTCAAGTGTCCGAAATGCAATTGGCACTACAAGTATCAAGAGACTCTGGAGATACACATGAAGGAGAAGCATCCCGAGAGCGAGACCTCCTGCATCTATTGCATCGCTGGCCAACCGCATCCCAGGTTAGCGCGCGGCGAGACCTACACCTGCGGCTACAAACCCTACAGATGCGAGGTCTGCAACTATTCCACCACCACCAAGGGCAACCTCAGTATTCACATGCAAAGCGACAAGCACCTGAACAACATGCAAGAGCTGCAACAGGGCGGCGGCGGTAGCTCGGCCGCGAACAATCCGTCCTCCTCGCAGGACGCGCCGATGCCCACCAGAAGTCCTCACCATCAGCAGAACCACAGTCCGCACATCGCCGGCCAGGCCGGGAACCAAGGGAAACCTAAACCAACGTTTCGCTGCGACGTGTGCAACTACGAGACCAACGTTGCGCGCAATCTCAGGATACACATGACTAGCGAGAAGCACACGCACAACATGCTGGTTCTCCAGCAGAACGTGAAGCACATGCAGACACTGTCCGCGTTGCAGTCCCATCATCAACAGGCGCAGCATCACCACCAACAGGCGCAACAGCAGCATCAGCAGCAACTAGAGCAGCTGCTCCATCTCGGCGGCTTGGACAAGCCTCAACACGCCGAAGCCGCTCTTGCTGACATGGCTTACAACCAAGCTCTCTTGATCCAGATGATGACCGGTGGTCAGCTGCCGCCGCAGCTCCCGCCGGAGATCATGGGTGGTATGGCGAGCATGGGGGCCATGGGGAACCTCGGCGGCGATGTCGGTCTGTCACCCGACAGCATGGACCCGCCGCCGGAACCGGCCGATCCTGATCCATCTCATCTCTATCACTGCTGCGTGTGCAACAACTTCGCCACCGACTCGTTGGAGGCCCTCGGCCATCATCTAGCCGTGGACCGGACGAGGACGCGCGAAGGCGAGATCCTAGCGCTGGTGGCTGGCCACTTCGTCTGCAAACTTTGTTCCTATAAAACCAACCTGAAGGCCAACTTCCAACTGCACTGCAAGACCGACAAGCATCTGCAACGCTTGCAGCACGTGAACCACGTGAAGGAGGGCGGGCTACGAAACGAGTGGAAGCTCAAGTACCTGGCTTCGCCCACGAGCGCCGCGCAATTACGATGTCACGCGTGCGACTATTACACGAACAGCGCTCACAAATTGGCCCTGCACGCCGCGTCGCCGAGGCACGAGGCCGCGGCTTTGCTTCTTCGTCACCTGCTCGAGGCCAGCGCCAACGTCCCGTCCCAGGCCAAGCTCTACCATTGCGCCTTGTGCGGCTTCAGCGCCAGGCACCGATTGCCCCTGCTCCAGCACGTTCGATCCCTCAGACATCTTCAGATGGAACAGTTGCATCAACTCCATCGGCGGAGCGGCATTCAGGGCAACGAAACCCCGCACACCGACATCGGCGATGTTTTCCAAGTTATGAGCGACCCTGACGCGCCACCTGCGCAACAGCCCAGTCCCACCACGCCGACCACGCCGAATGCTACCAGTGCCAATAACGAACGACGAGAGGAAGGTAGCGACTGCGGCAGCGAGGTGAAGCAGGAGCCGGATAACGATCAAGAACCGGAACAAGAGCCGGAGAACGAGCACGAGGAAGTCACCTGCCCGTATTGCACTTATCAGCCGACGTCGCGCGAAGAATTGAGGCAGCATTTGCAAGTGGCTCATGTCCAGGATGCGGAGGACAAAGCGGAGGCCGTAAAGGAAGAGCCACCGCCGGAATTGTTGTGCCCGCTGTGCCAGGACGGCTTCAAAGAGCGTTCCGCTCTGGAGAAGCACGTGATGCAAATCCACTCGGTGAACGCGGACGGGTTACAACGGCTGCTGCTGCTGGTGGACCAGAGCCACTGGCTGAACAACAATCCGCGAAACACCTCGACCCCGGCGGTGGCTATGCCTACGTCGCCGACCACCACCACCAAGCAGCCGCAAGAGGAGGACATGAGCGAGCGTGGGGCCAACGAGGAGATCGAGGAGATCACCAGATGCACCGTCTGCGGACGCGTGTGCCGCTCGTTGGAGGAGCTCCAGCAACATCACAGGGAGACCCATCCGGCCACTACGCCCACGCTGGCTGTCAGTGAGAAACACGTTTACAAGTATCGATGCGGACAGTGCAGCCTGGCGTTCAAGACCCTGGAGAAGCTTCAGCAGCACTCGCAGTATCACGCGATCAGGGATGCGACCAAGTGCGCCCTCTGCGGCCGATCGTTTCGCTCGGTCCAAGCCCTCCAGAGACACCTGGAGTCAGCTCACGCGGACCTGCACGAGGACGAGCTGGCGCAGTACAAGCAGAGCCTGTTGCACGCCCATCCGTTGCTTCAAGCGCTCACCGAAGAAGCCCTGCGCAGGCAAGGTAGCCTGGTCGGTGAACAGAACGTCGAGGATGACACCAGCAAAGCCGACGAAGAGGAGAGCGATGCCAGCGACTCGTCGCCGTTGCACAAGGAGCAGCGTCTCCTGGAGGATTATCTGAACAGCCAACCGGTCGCCGAGGACTCCTACCACGACCCTGGGAGGAAGTTCAAGTGTCATCGCTGCAAAGTCGCGTTCACCAGGCAGAGCTATCTCACCGGGCACAACAAGACGCTGCTGCACCGCAAGGGAGAGAAGATGTCCTATCCCATGGAGAAGTATCTCGATCCGAACAGACCGTACAAGTGCGACGTGTGCAAGGAGAGCTTCACCCAGAAGAATATCCTGTTGGTTCATTACAACAGCGTGAGCCACCTCCATAAACTGAAGAGAGCCATGCAGGAGCAGGGTAACAATAACACGCTGATCTCCGTGGTGCCGCCTGCCAGCCCGACAGAGTCGCCCGACTCTCAGCAGGACCAAGACAAGAAGCCGTATAAGTGTAACATCTGCAAGGTCGCCTATTCCCAGGGTAGCACCCTGGACATTCATATGAGGAGCGTGCTGCATCAGACCAGGGCCAGTAAACTGCCAGATCTCGCTGCCAGTGGTCAACTGGACCTAGCCCGTCCGTTGATCGAACAACCTCCGCCGAGCAGCCCCAACAGTCCACCTGTCAACACCAGCACCTCGGGGAACAGCGGGACGATGCTCTCTTGCCCTCGGTGCAGCGCTCTGTTCGTCAACCAGGAGCAACTAGCCACTCACCAACAGCTTTACTGTATATTCAGCAACCCGCTGGCCCTGTTCCAACAATTGGCCGCGTCGCAACAGCTCGCTTCGTCGGCGCCCGCGAAGACGCCACCTCCGACGTCCACCACGCCTGGTCCTCAACAACACCTGCAGCAGAGCACTCAGCACTCCTCGCAAACCACCCAGGACATCCTGTCCCAACCGCGTCACAAGACGTCGCAGATGTACAAACATCTCCTGGAAAGCTTCGGGTTTGACCTGGTGATGCAGTTTAACGAAAACCACCAAAGACGTCAGCGCAAGGAAGAAGAAGCTGCTGCTGCGTTACAAGCTCAGCAAGAGCAACAGAAGCAAGAGCAACAGAAACAAGCTTTAGCTGCGCAAGCTGCTCGCGAGAGAGAAGAGGAAGCCGAGGAACCCGCTGACGACGACGTGATACCGGAACTGACTAGAAGCACCTGTCAGCATTGCAACAAGGAGTTCAGCAGCGTTTGGGTACTGAAGGCTCACTGCGAGGAGGTGCACCGTGACCTGGTGCCACGCGAGTTCCTCGAGAAGTACGCTCAGCAGTTCAAGTGCGAATACGAGAAGAAGAGCGTGGTGGTGACTGTCGCGACGTCTTCATCCACGTCGTCCGGGCCTAGAAGCTCGACGCCGGCCTCTGCTCAGCCGCAAGATCTGTCGTCGGATAAGGAGCAACGCGAGAAGGAGAAGGAAGAGATCGTGGAGAGTAAAGATCGTATCAGCAAGACTCCAGAGGCTACGTCCACCACGCCAGCAACCACTCCGGCTCTGAGCAACACGCCGGTGTCGAGCACCGATTCCACCACTCCCACTGTTCTGCAAACCAATACTCAGCATCACATGCAACAACAGCAGCAGCAGCAGCAACAACAACAGCAGCATCAACAGCAGCAGCAACAACAACAACAGCAACAGCAACACGCTCAGCTGACTCTGGCTCAGCAGATGACCGAGATGCAAGCTGCTTTGAACGCGATGGCTGCGTCCCAGCTGCAGCAGCAGCTTCAACAGTATCCTGGGCTGATGATGGGCATGATGGGCTTACCGCTCGGATTGAACGTTCCTGCCTTAGCTGCCATGAATCTCCAACCACCGTTGGTGCCCATGATGCTACCACCTCCGCCGTACGATGGCACGGCCACCGGATATCCGCCTATCAATGCTCAAGCTGATCTTCTGGCTAAGCAACATCTCGCCTTGCAGCAGCAACAAGCAGCAGCCGCTAACGCGGCTGCCTCGCAGAAACGTGCGCGAACGCGCATAACCGACGAACAGCTAAAGATATTACGAGCGCATTTCGACATCAACAATTCTCCCGGCGAGGAGCAGATTCTCGATATGGCGGCTCAGAGCGGGCTACCG
- Protein Sequence
- MTMQSQGQQQQQQEQQGPSPSPSPTGGDVEKFDGKIVYNPDGSAYIIEGESELSEDDSLPDGCIVDGRGVSVPHSLVFPQIASAYYVSRLYAHQAYQQQQQQQQQRSATQQHNPDLPVMHSYRVISYRSAEGSKQPPPPPAAPPPPAASVPVKPILMCFICKLSFGYAKSFVAHAQGEHQLTLMEDERQILSHSTASAIIQAVGRGKQPLVSFLEPVTSSTCPQPSAAQMQNQQQQQRTESTDHETPTTTSTPASTPGVPSSPQQQQQQQPQRPSPSTPTTPTSHSSHPLAYNHQQPQQHQWTGAQVSAASWAKAPDASSMHYTSPPPPTSSTKGSPSSYAALTQQPPNFLTGTTIGVCPEHMQGRPSGVECPKCELILASSRLAGPGGPLAGIHSRNSCKTLKCPKCNWHYKYQETLEIHMKEKHPESETSCIYCIAGQPHPRLARGETYTCGYKPYRCEVCNYSTTTKGNLSIHMQSDKHLNNMQELQQGGGGSSAANNPSSSQDAPMPTRSPHHQQNHSPHIAGQAGNQGKPKPTFRCDVCNYETNVARNLRIHMTSEKHTHNMLVLQQNVKHMQTLSALQSHHQQAQHHHQQAQQQHQQQLEQLLHLGGLDKPQHAEAALADMAYNQALLIQMMTGGQLPPQLPPEIMGGMASMGAMGNLGGDVGLSPDSMDPPPEPADPDPSHLYHCCVCNNFATDSLEALGHHLAVDRTRTREGEILALVAGHFVCKLCSYKTNLKANFQLHCKTDKHLQRLQHVNHVKEGGLRNEWKLKYLASPTSAAQLRCHACDYYTNSAHKLALHAASPRHEAAALLLRHLLEASANVPSQAKLYHCALCGFSARHRLPLLQHVRSLRHLQMEQLHQLHRRSGIQGNETPHTDIGDVFQVMSDPDAPPAQQPSPTTPTTPNATSANNERREEGSDCGSEVKQEPDNDQEPEQEPENEHEEVTCPYCTYQPTSREELRQHLQVAHVQDAEDKAEAVKEEPPPELLCPLCQDGFKERSALEKHVMQIHSVNADGLQRLLLLVDQSHWLNNNPRNTSTPAVAMPTSPTTTTKQPQEEDMSERGANEEIEEITRCTVCGRVCRSLEELQQHHRETHPATTPTLAVSEKHVYKYRCGQCSLAFKTLEKLQQHSQYHAIRDATKCALCGRSFRSVQALQRHLESAHADLHEDELAQYKQSLLHAHPLLQALTEEALRRQGSLVGEQNVEDDTSKADEEESDASDSSPLHKEQRLLEDYLNSQPVAEDSYHDPGRKFKCHRCKVAFTRQSYLTGHNKTLLHRKGEKMSYPMEKYLDPNRPYKCDVCKESFTQKNILLVHYNSVSHLHKLKRAMQEQGNNNTLISVVPPASPTESPDSQQDQDKKPYKCNICKVAYSQGSTLDIHMRSVLHQTRASKLPDLAASGQLDLARPLIEQPPPSSPNSPPVNTSTSGNSGTMLSCPRCSALFVNQEQLATHQQLYCIFSNPLALFQQLAASQQLASSAPAKTPPPTSTTPGPQQHLQQSTQHSSQTTQDILSQPRHKTSQMYKHLLESFGFDLVMQFNENHQRRQRKEEEAAAALQAQQEQQKQEQQKQALAAQAAREREEEAEEPADDDVIPELTRSTCQHCNKEFSSVWVLKAHCEEVHRDLVPREFLEKYAQQFKCEYEKKSVVVTVATSSSTSSGPRSSTPASAQPQDLSSDKEQREKEKEEIVESKDRISKTPEATSTTPATTPALSNTPVSSTDSTTPTVLQTNTQHHMQQQQQQQQQQQQHQQQQQQQQQQQQHAQLTLAQQMTEMQAALNAMAASQLQQQLQQYPGLMMGMMGLPLGLNVPALAAMNLQPPLVPMMLPPPPYDGTATGYPPINAQADLLAKQHLALQQQQAAAANAAASQKRARTRITDEQLKILRAHFDINNSPGEEQILDMAAQSGLP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00233446;
- 90% Identity
- iTF_00233446;
- 80% Identity
- iTF_00684710;