Edil007690.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Euglossa dilemma
Gene Symbol
Zbtb41
Assembly
GCA_002201625.1
Location
NIJG01000161.1:7318741-7328616[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 1.1 82 3.7 5.1 2 23 241 263 240 263 0.96
2 20 0.035 2.6 8.4 2.7 1 23 313 335 313 335 0.97
3 20 0.13 10 6.6 2.2 1 23 384 406 384 406 0.98
4 20 0.028 2.1 8.7 0.2 1 20 461 480 461 482 0.94
5 20 0.00048 0.036 14.3 1.8 1 23 522 544 522 544 0.95
6 20 0.00062 0.046 13.9 0.1 1 23 591 613 591 613 0.97
7 20 0.0006 0.045 14.0 0.1 1 23 619 641 619 641 0.97
8 20 6e-07 4.5e-05 23.4 0.3 3 23 686 707 685 707 0.96
9 20 0.019 1.4 9.2 0.4 1 23 712 735 712 735 0.82
10 20 9.4e-05 0.007 16.5 0.3 2 23 744 766 743 766 0.96
11 20 7e-05 0.0052 16.9 0.3 1 23 774 796 774 796 0.96
12 20 0.17 13 6.3 0.3 1 20 849 868 849 868 0.96
13 20 0.0002 0.015 15.5 0.1 1 23 887 909 887 909 0.98
14 20 0.00028 0.021 15.0 0.8 1 23 923 945 923 945 0.97
15 20 0.0001 0.0074 16.4 2.7 3 23 965 986 964 986 0.95
16 20 0.015 1.1 9.6 1.5 2 23 1038 1060 1037 1060 0.93
17 20 0.0041 0.3 11.4 1.6 2 23 1087 1109 1086 1109 0.92
18 20 0.011 0.83 10.0 0.0 1 23 1116 1140 1116 1140 0.95
19 20 0.022 1.7 9.1 1.0 1 23 1145 1168 1145 1168 0.97
20 20 0.11 8.4 6.8 1.1 2 23 1198 1220 1198 1220 0.94

Sequence Information

Coding Sequence
ATGGACGAGGTGGTGGAGTTGGAAAAGATGGAAAACGTGTGTAGACTCTGCCTCTCCACCGACGAGCCAAAATCGTCGGTGTTTGGAACGCAAAATGCTCCGATATCATTGGCCAGTAAGATACAAGCTTGTCTGTCGATTCAGATTTTAACTACGGACAAATTATCAACGCAAATATGCGCGCAATGCGTTAAAAACATTAATCAGTGGCATGATTACAAGGAATCGTGTTTGCGTTCCCAAGACAAATTACAACAATGGTTGCAACGTCATCTACAGTCGAGTCCAATGGTTGTGACTATTAAAGATGAACCTGTTGATTTGGACTTTTGTGAAGACAATGTTGAGATCATTTCTGAATCTGCCACTGATTCAGATCTGGAAGCTACTAATGTCGATGACAGTGCAAATAATGTAGCAAATAATGTGCAAGAATTGACTGATGACGAAGTAATTTTAGATAAAGGTGAACCATCTTTAACGAAGAATTTGGATATATCTGTAAAATCTGAACCACAAGAGGACTATGATACAGACTGTACTATAGAAATAGAATCTGTTACTGGTAGTGAACTTGTACTGAATCCTCTTTCAAACACAGAGGATAGAGTAATGGAAGCTGATTCTACCCAAAAGTCCAGTGCATCCACATCGGCAAGTAAGAAAAAGACAAGAAGAGGACCACACACGCATTTTAGAGGTGCGCGTGTTTTCAAGCAGAAATGTATGCACTGCCAAATTAATCTGCATTCTAAGTATTCTTATGCGAAGCATATGGAAAGATTTCACAGTGATAAACAGAATGGTAGTGCTCATAAGGTGGAACTAGAAGATGACGAAGAGCTTGTCGAAGATTTGGAAGAGGAATTAATGAGCATGGAAAAGGATGCTCCGTTAACACAAGTACAGCAAAATATTATCAGTCAGTTGAAAACGTTCTCGTGTTACTCTTGTCAACAAACTTTTAACGATCGTAGAAGCACACTTTCACATATTCGTCAACACATGCCCGATCTGAGGCCGTATACGTGTATCGCGTGTTTGACAGAATTCCCAGATCGATCAATGTACAAGTCGCATTGCGGAGCATCGTTCGAGTGTGCAATGAAGATTGCACTAGTTATACCGAAGCAAGGCGAGGAAAGGTACTTCACGTGTAATATGTGTTTGCGTTCGATGCAGAACAGGAAGCAGTTGCTTACCCATCTGTCGAGACATTCGGATAAGCAATACGAGGAACTAATATCTCCGTCACGATCTCCTCCCAAACTAAAACCAGTAACTCCTCTACCACCTGTTAAGAAAGAAGTAATAAGAAAGTCATTAGAAGAATGCATGAATATACCCAATCCTTATAAAAATGGCGATCCTGCGCATAATCATGTATGTGACTTGTGTGGTATGATCTACAGGTACAGGCCCAACATGTTGAAACATAGAGATTTGTGTCAACGTTTATCAGCCGAAGTCAGAACATCCTACAGGTGTATTCACTGCGGTATGACGTACCTCGTATTTAAAAAGTTTCATACTCATATCACGCTCGATCACAAGAAAAAAGATTTTACGTGTACTTATTGCGGCAGTAAATTCAGATCTCCTAGCGATTACTTGGATCATCATGAAGCACATCGGTTGGCTCGTTGTAAAAATCATCCCGACTCGAATAATGTTTCAATAAAGCCTATACAGAATATTTCGACACCTATCAAGGACTGGGATACGTTCGAAGCCGAAGTGAACACGGGCAAACTATCAGATAGCAATCAGTATAGTTGTGCTCTTTGCAATCTGGAATTTGCGACTAGGGCTGAACTGACGGAACATAGGAATCTTCATTTGAAAGTAAAGATCTACTCTTGTGTCATATGTCGCAGTATGTTCAGCAGTGCCGGTGCTTTAGAGATTCACATGAAAGATCATGGTATAGAAGATCCGAACGAAAGAAACGCAAACATTTCATGCGTCGAGTACGGTACGGTGGAAGACGATTCGCTAGATTCAAGTTCATTAAATCTAAGCGCCACTTCGGATCCTGGTACGAAAAAGAACGATTGTGACCTATGCGGTAAAGCATTTTCAAATACCGCGAATCTTAAGAGGCATATAAGAAACGTCCACAGTGTCAATAAGTATAGCTGTCCTAATTGTTCAAGAATGTTCAAGACTAAAGAAATACGTGATCGACACATTATCATTGACCACGCAAAGCCTCAGAAAACTATGCTTCGGTGTCCACAGTGTCCAAAGACTTTCGTCTTCCAAGGTAACCTAGATCTCCACTTTCAGACTATTCATGGTGAGAAATCGTACGGTGGTCACAAATGCGACATTTGTGGCAAAGAATTTGTAGAGGAAGCATCCCTAAAGATACACAGGAGTTGGCACAATCGAGCAAACTCTCGGTTGAGCTTGAAATTCATGAAGAAAGAGGACCAAACGCCGTCGAAACAAGATGTATCGTTACATGGAAATGCAGGTCGACCAGCTAGGGCACGAAAGTCTTATCCGAACTCGCCTCCTGTAAAACCTGATAGTGGTAATTTCCAATGTCAGGTTTGCAGTGACAAGTTCAACGACGTGACAGAACTGAGAACACACTTATGGGATGTACATTGTGCTCGCAACAAAACCGAGAAAAACTTTGCGGACGATGAATTCCAATGCGAGATTTGCACGAACGTTTTCCCTGACAAGCAAACGTTGGACGTGCACATGCAATGGCACAATGCTCATCCTATTCTCACTGACATCCAGAAGCCCAATTTCCCTTGCGAGATTTGCGGCAAACTTTATAGTTCCAAAAAAGTATTGTCAAGACACAAAAAGCTTCACAAAGCTACAACAGTGGCGTCCATGAAGTTCCAGGTTACTAACAAAAATCAGGTGCTGTGCAACATTTGCCACAAAGTATTCAACAGTAACCAGTCGCTGCAACGTCACAAATTAAACCTGCACGGCAACATATTCCTTGAACGACCTCAAGTGACCTACAATAACGCGAGAAAGGTGTATCAAGAGGAGACTAAGTCGAAAAAGATAAAGTTAGAAGAAGACGATAAGAAAACGCCGTTCGCTATGGACGCTTTGACTGCAGGCAAAAAGTCCGTCATGTGCCATGTTTGTAGAAAGTTCTTCGCGAACATGAGCGTATTGTATAAACACAAACAGTTGGTACACAAAAGTCACACGGTGAAGAATACAGCAAAGGCATTCGCGGTGGAGTGTATACCGATGCCGACCACCGATGGTAAAGTCTCCTGTAACGTTTGTCACAAGAAGTTCTCCGGTGTGCCGAATCTTCGGCAACATTTCACTGTAAAACACAAAAATGCGCCTCCGAAGTTCGCTTGCCCCATAGACGGTTGCAAGCTCATGTTCCCCACGCCGCTGACGCTGAAGAACCACGAGTTGTCGCACACCAGCACGATTTTCAGTTGTACCCTGTGCGACAGACACGTGTTCAGCAGGCCGGCAATGTCGAATCACATGCTAACAGTGCACAACACAGTCTACGACGCCGAGAGCAGCAAGAACTTTCACAGAGAGATGGATTTGTCGACGTACATGGTGGAGGGCGCGGTAGACGCGACTTGTCCTCGATGCAAGATCAAGTATCCGAACAACAGGGCCATGAAGATTCACTATTTTAAGTTCCACGAGGGCACGGATCAGTAG
Protein Sequence
MDEVVELEKMENVCRLCLSTDEPKSSVFGTQNAPISLASKIQACLSIQILTTDKLSTQICAQCVKNINQWHDYKESCLRSQDKLQQWLQRHLQSSPMVVTIKDEPVDLDFCEDNVEIISESATDSDLEATNVDDSANNVANNVQELTDDEVILDKGEPSLTKNLDISVKSEPQEDYDTDCTIEIESVTGSELVLNPLSNTEDRVMEADSTQKSSASTSASKKKTRRGPHTHFRGARVFKQKCMHCQINLHSKYSYAKHMERFHSDKQNGSAHKVELEDDEELVEDLEEELMSMEKDAPLTQVQQNIISQLKTFSCYSCQQTFNDRRSTLSHIRQHMPDLRPYTCIACLTEFPDRSMYKSHCGASFECAMKIALVIPKQGEERYFTCNMCLRSMQNRKQLLTHLSRHSDKQYEELISPSRSPPKLKPVTPLPPVKKEVIRKSLEECMNIPNPYKNGDPAHNHVCDLCGMIYRYRPNMLKHRDLCQRLSAEVRTSYRCIHCGMTYLVFKKFHTHITLDHKKKDFTCTYCGSKFRSPSDYLDHHEAHRLARCKNHPDSNNVSIKPIQNISTPIKDWDTFEAEVNTGKLSDSNQYSCALCNLEFATRAELTEHRNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIEDPNERNANISCVEYGTVEDDSLDSSSLNLSATSDPGTKKNDCDLCGKAFSNTANLKRHIRNVHSVNKYSCPNCSRMFKTKEIRDRHIIIDHAKPQKTMLRCPQCPKTFVFQGNLDLHFQTIHGEKSYGGHKCDICGKEFVEEASLKIHRSWHNRANSRLSLKFMKKEDQTPSKQDVSLHGNAGRPARARKSYPNSPPVKPDSGNFQCQVCSDKFNDVTELRTHLWDVHCARNKTEKNFADDEFQCEICTNVFPDKQTLDVHMQWHNAHPILTDIQKPNFPCEICGKLYSSKKVLSRHKKLHKATTVASMKFQVTNKNQVLCNICHKVFNSNQSLQRHKLNLHGNIFLERPQVTYNNARKVYQEETKSKKIKLEEDDKKTPFAMDALTAGKKSVMCHVCRKFFANMSVLYKHKQLVHKSHTVKNTAKAFAVECIPMPTTDGKVSCNVCHKKFSGVPNLRQHFTVKHKNAPPKFACPIDGCKLMFPTPLTLKNHELSHTSTIFSCTLCDRHVFSRPAMSNHMLTVHNTVYDAESSKNFHREMDLSTYMVEGAVDATCPRCKIKYPNNRAMKIHYFKFHEGTDQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00684900;
90% Identity
iTF_00684900;
80% Identity
iTF_00684900;