Basic Information

Insect: Euglossa dilemma
Gene Symbol: -
Assembly: GCA_002201625.1
Location: NIJG01000017.1:80613-86676[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 6.3e-06 0.00047 20.2 1.0 2 23 24 45 23 45 0.95

2 15 0.00013 0.0094 16.1 0.6 1 23 51 73 51 73 0.98

3 15 5e-05 0.0037 17.4 0.1 1 23 77 99 77 99 0.98

4 15 8.8e-06 0.00066 19.8 0.7 1 23 105 127 105 127 0.99

5 15 2.1 1.6e+02 2.8 2.9 1 20 136 155 136 158 0.77

6 15 0.035 2.6 8.4 2.3 1 23 312 334 312 334 0.97

7 15 1.8e-06 0.00013 21.9 0.7 2 23 344 366 344 366 0.96

8 15 9.9e-05 0.0074 16.5 4.9 1 23 372 394 372 394 0.98

9 15 0.024 1.8 8.9 0.4 1 23 398 420 398 420 0.97

10 15 3.1e-06 0.00023 21.2 1.5 3 23 428 448 426 448 0.97

11 15 8.8e-06 0.00066 19.8 0.2 1 23 454 476 454 476 0.98

12 15 0.055 4.1 7.8 0.9 1 23 482 504 482 504 0.97

13 15 2.7e-07 2e-05 24.5 0.1 2 23 511 532 510 532 0.97

14 15 4.7e-07 3.5e-05 23.8 0.6 1 23 538 560 538 560 0.98

15 15 8.4e-08 6.3e-06 26.1 1.9 1 23 566 588 566 588 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	6.3e-06	0.00047	20.2	1.0	2	23	24	45	23	45	0.95
2	15	0.00013	0.0094	16.1	0.6	1	23	51	73	51	73	0.98
3	15	5e-05	0.0037	17.4	0.1	1	23	77	99	77	99	0.98
4	15	8.8e-06	0.00066	19.8	0.7	1	23	105	127	105	127	0.99
5	15	2.1	1.6e+02	2.8	2.9	1	20	136	155	136	158	0.77
6	15	0.035	2.6	8.4	2.3	1	23	312	334	312	334	0.97
7	15	1.8e-06	0.00013	21.9	0.7	2	23	344	366	344	366	0.96
8	15	9.9e-05	0.0074	16.5	4.9	1	23	372	394	372	394	0.98
9	15	0.024	1.8	8.9	0.4	1	23	398	420	398	420	0.97
10	15	3.1e-06	0.00023	21.2	1.5	3	23	428	448	426	448	0.97
11	15	8.8e-06	0.00066	19.8	0.2	1	23	454	476	454	476	0.98
12	15	0.055	4.1	7.8	0.9	1	23	482	504	482	504	0.97
13	15	2.7e-07	2e-05	24.5	0.1	2	23	511	532	510	532	0.97
14	15	4.7e-07	3.5e-05	23.8	0.6	1	23	538	560	538	560	0.98
15	15	8.4e-08	6.3e-06	26.1	1.9	1	23	566	588	566	588	0.99

Sequence Information

Coding Sequence: GATCACGCTCTGGCTCTGCACTTAAAAATGCACGAACAGGACGAGGTACAATTGCAAGACGACCAGCTTGTCTGCGAGCATTGCGGCTGCAGTTTCGCAACGGCATCCGCATTGAAGGAGCACCAATTAGAGCACGAGGCGAATGAGAGTTACGCCTGCGAGACGTGCGGCTACATTACCGATCATCGAGAGAGCCTGATAGCTCATCAGAAGCGGCACAATATCGAGTACGAGTGCGAGATCTGCGGTGCCGGTTTCGTTTCTTCCACTAGCTACGAGGAGCACCAGTCCATGCATTCGCACGAGAAACCGTTTCAATGCGAGATTTGTAGCGCCACGTTCCGTTATCGTCAGGGATTGAGGTTGCACATGAAGATTCACAGTCAGCCTGAAAGCGGAAGAAAGTACAGATGCGAAATCTGCGGATTCGAGACTTTCTATTATTGCTATTACGAGGAACATTTGTGGACACATTCTGGAGAAAGTCAGGTGGCTTGCGACGTGTATGGTAAATTCACCGTGAGACTTTATACGAAGATACACGTTAGAATCGGCGAGAAGCCGGAGATACGTGAGTTTTGCGAAGAATTATCTGTCTCGAGGGAGTGTTTGATCAAACATCGAAGAACTCGTACCGATGAAAGGCATTGCGAATATAAAATCGTCGAGATAATACCTTTCACGCGACAAGCCATCCTGTGCCTGGAGTTCGAGGAAACGAAAATAGAACCGATAGATACTCTGGAGGATATGGAACTGGTCAAGTACCAAAATGAGGTTTGCACGGCCGAAGAGTTCGAACAGATCAGCCACCAGGAAATAGTGGCGGAAACGTTAGAGTACACGGAGGACACGGAAGTGAAGCTGGTGGAAGAACAGGAGGAGCAGGTAGAGGAGATTAACAAAGACTTTCACAGGAAATGCATGGTGATCTATGAGTGCGATATCTGCAGCAAGAGGATGCGTAAGAAGCTTCAGTTTCTAAAGCACAGGCAGGACCACGAGAGGAACAACGAGGAGGTGAGTGGTCGTTGCGTTGAATGTGACAAAACGTTCACGGACGAGGAGAAGCTGAAGAAGCACATGATCAAAGTGCATCAAAAGGAGAAGCCGTTTCAGTGCGTGCTATGCAATAAATGCTTCAAAACCGAGGAGTTCCTGAAGACGCACCTGAAACAGCACAACAAACGTTTCACCTGTGATATCTGCGGCATCTCTAAGGTGTCCGGCTACGACCTGCGTCTGCACAAGAAGAAGCACAACGAGGAATACGTGACTCACTGCGAGATCTGTGGCAAAGGTTTCTACACGAATCAGACCCTGGAGAGACACTTGCTCACTCACACAGGACAGAAACCGTTCGTCTGCAAAGTGTGCAATACCCCATACGCGAGTGCCGCTTATCTGAACACGCACATGAAGTCTCACGGCGAGAGGGAGAAGCATAAGTGCAATATCTGCAACTTCGAGAGCTACTGGAAAGCAGCTCTGAAGGTGCACCTTAAGATACACACCGGCGAGAACTTGATCACCTGCGAAATTTGCGGCAAATCGGTCTCTAGTAAAGCTTACCTGCAAATCCATATGCGTATACATTCAGGTGAGAAACCACACGTTTGTGAAGTATGTGGCAAAGCCTTTAGCGTGCGGAAATATTTGATTGTACACTTGAGAACGCACACGGGCGAAAGACCGTACGAGTGCAAGGTGTGCCAGAAGAGGTTCACACAGCAGGGTTCATTGAACTCGCATATGAAGTCGCACAATGAAAGAAAG
Protein Sequence: DHALALHLKMHEQDEVQLQDDQLVCEHCGCSFATASALKEHQLEHEANESYACETCGYITDHRESLIAHQKRHNIEYECEICGAGFVSSTSYEEHQSMHSHEKPFQCEICSATFRYRQGLRLHMKIHSQPESGRKYRCEICGFETFYYCYYEEHLWTHSGESQVACDVYGKFTVRLYTKIHVRIGEKPEIREFCEELSVSRECLIKHRRTRTDERHCEYKIVEIIPFTRQAILCLEFEETKIEPIDTLEDMELVKYQNEVCTAEEFEQISHQEIVAETLEYTEDTEVKLVEEQEEQVEEINKDFHRKCMVIYECDICSKRMRKKLQFLKHRQDHERNNEEVSGRCVECDKTFTDEEKLKKHMIKVHQKEKPFQCVLCNKCFKTEEFLKTHLKQHNKRFTCDICGISKVSGYDLRLHKKKHNEEYVTHCEICGKGFYTNQTLERHLLTHTGQKPFVCKVCNTPYASAAYLNTHMKSHGEREKHKCNICNFESYWKAALKVHLKIHTGENLITCEICGKSVSSKAYLQIHMRIHSGEKPHVCEVCGKAFSVRKYLIVHLRTHTGERPYECKVCQKRFTQQGSLNSHMKSHNERK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -