Edil007314.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Euglossa dilemma
Gene Symbol
-
Assembly
GCA_002201625.1
Location
NIJG01000017.1:53296-65627[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 35 0.013 0.98 9.8 0.4 2 23 15 37 15 37 0.92
2 35 0.0075 0.56 10.5 2.7 1 23 41 63 41 63 0.98
3 35 0.0025 0.19 12.1 3.1 1 23 69 92 69 92 0.95
4 35 2.7e-05 0.0021 18.2 4.3 1 23 99 122 99 122 0.98
5 35 0.15 11 6.5 6.6 1 23 238 260 238 260 0.97
6 35 1.1e-05 0.00082 19.5 3.1 1 23 266 288 266 288 0.98
7 35 0.13 9.5 6.7 1.9 1 23 295 318 295 318 0.94
8 35 5.3e-06 0.00039 20.5 1.3 1 23 324 346 324 346 0.97
9 35 1.4 1e+02 3.4 3.9 2 20 352 370 351 374 0.82
10 35 1.2e-05 0.00088 19.4 3.4 1 23 381 403 381 403 0.97
11 35 2.7e-07 2e-05 24.5 1.0 1 23 407 429 407 429 0.99
12 35 0.048 3.6 8.0 1.1 1 23 435 457 435 457 0.94
13 35 7.5e-06 0.00056 20.0 0.6 1 23 463 485 463 485 0.99
14 35 0.00023 0.017 15.3 1.2 1 23 626 649 626 649 0.96
15 35 2.2e-05 0.0016 18.5 5.0 1 23 655 677 655 677 0.98
16 35 0.021 1.6 9.1 7.6 1 23 686 709 686 709 0.94
17 35 0.0016 0.12 12.7 1.2 1 23 715 737 715 737 0.95
18 35 2.1e-05 0.0016 18.6 2.4 1 23 742 765 742 765 0.96
19 35 0.0014 0.1 12.9 0.9 1 23 771 793 771 793 0.98
20 35 4.5e-07 3.3e-05 23.8 0.7 1 23 797 819 797 819 0.99
21 35 0.011 0.82 10.0 8.3 1 23 825 847 825 847 0.98
22 35 0.081 6 7.3 0.1 1 13 853 865 853 868 0.90
23 35 0.0034 0.26 11.6 0.4 3 23 959 979 958 979 0.97
24 35 0.0025 0.19 12.0 4.4 1 23 1016 1039 1016 1039 0.97
25 35 0.00067 0.05 13.8 0.6 5 23 1054 1072 1051 1072 0.93
26 35 0.088 6.6 7.2 2.3 1 23 1080 1103 1080 1103 0.95
27 35 0.055 4.1 7.8 6.1 2 23 1179 1200 1179 1200 0.98
28 35 0.006 0.45 10.8 3.8 1 23 1209 1232 1209 1232 0.98
29 35 0.027 2 8.8 2.0 1 23 1247 1270 1247 1270 0.95
30 35 3e-06 0.00023 21.2 1.2 1 23 1276 1299 1276 1299 0.96
31 35 0.031 2.3 8.6 0.8 3 23 1306 1327 1304 1327 0.94
32 35 0.00051 0.038 14.2 0.5 1 23 1332 1355 1332 1355 0.97
33 35 4.4e-08 3.3e-06 27.0 0.4 2 23 1362 1383 1361 1383 0.97
34 35 5.3e-07 3.9e-05 23.6 0.8 1 23 1389 1411 1389 1411 0.98
35 35 4.4e-06 0.00033 20.7 0.1 1 23 1417 1439 1417 1439 0.98

Sequence Information

Coding Sequence
GACGAGGTCGAGGTGGACCAAGTTTTGGACAAGATCAGGAACACTTGCCCCTTCTGCGAGAAACGCTTCGACAACGCGAAGAAGGTAGAGAATCACGTGACCTACGTGCACCGAAAGCCGTATAAATGCGACATGTGCAAAAGAGCGTGTCACACTGCCCGAGCGTTGGAGGAGCACAAGATGATCCATCGGCCGGATTACTTCTTCGAGTGCGAGACCTGCCACGTGAAGTACAAAAGCGAGGACAGCTTGAAGAGGCACAACATGCGTACCCACAGCGACTACGAGTCGAAGTACGTGTGCGAGCACTGCGGTCGCAGTTACAAGCTGAAGATCGACCTGACGCACCACATGAAGAGGACCCACGTCTCGGAGCTGCAGATCTGTCGATTTTGCGGCAAGTTCAATGCGCTAGACCCACTCGCTCCAACTTTTCTGATAGTAAAGCTAGAAGATAATTACTTTCGGATACCGACGTCGCTGAGCGTGTTCATGATGAAGGAACCGCCGCCCATCGAAGAAACGAACGTTCAGTCGTCGAAAGACACCGTCCAAACGACGAAGACCAGTCAGCCGGCGGAAGAGAAGACGAAGGATAACGCGAGCACTAGCGACCCGTTCGAGGACCTCGATGACGCACCGTTAGACTTCCGGAAGAAACAGGAACTGGAGAAGAACAAGACCGGCAAGCAGCTGTTGAAAAAGAAGCTGCACACCTGCGAGATCTGTTACGCGACGTTCGATCGTAAAAGCAAGCACACCAGGCATATGTACAAGCACAGCAATTCGAGACCACACAAATGCGCTATCTGCTCCAAGGGATTTAAGACCACTGCTCACCTGACCAGGCACATGGAGGTCCACGACGAGCCTGTGAACTTGCACGCCTGCAGCCTCTGCGACTTCAAGGCACGCACCAAGCCTTACCTGAAGATCCACTACATCAGAAAGCACACGGAAGACTACAACTACAAGTGCGAGCAGTGCGGAAAGATGTTCAAGGTCCAGTCAGACTACACCACTCACGTGAAGGACCACGACACGGAATCTTGCGTCTGCGACATCTGCGGCTCGTCTTATCCCAGCAAAAGCTCGCTCTACTTTCACAAGCATTATAAGCATAAGACGAAGGTGAAGAAGTTTCAGTGTCAGACGTGCAAGAAGAAGTTCAAGACGCAAAAGAACCTGGACAATCACATGGAGCTGCACAAGATCAAGTACGTCTGCGAGCAGTGCGGCATGGAGTTCAAGACTAAATATGGCCTCACCAAGCATCTCAGGACACATTCCGGGGAGAAGTCCTATCTGTGCGCGATCTGCGGGAAAACCTTTGGTTGTTTGAGCTCTCAGAAGATCCACCTGTTGACCCACGTCGGCGAACGGCCCTACGTCTGCGATATCTGCGGCCAGAGCTTCACCCAGAGATCTCCCATGATGCTGCACCGCAGAAAGCACCCTGGAGTGCACCCGCCACCTCCGCCGATTAAGATAACGAATCTGCTGCACGGTGTACAGGACAAGATAATCGTGAACAAGAGCAGCAAGAAGTCGACGCTGCCTTTACCATCGAAGAACAAAACCATCGTTGGTAACGAAACGAAAGAGCAATTAAACACTTCGCACAAGTCGTCGAGCATTCTCCAAAGAAGAATCGCGTTTCGAGCCTCGAAAACTCGGAAACGCAGAAGCAACAGGCGTTTGAACAATTCTTCCAGTTGCATCGAAGGGAAAAGTATTTCCACTAGTTGCGCGAATTTCGAGCGAAGGAAATTAAACGACGAAGAGAGGAATTCTACTTGTTCGGATAAATTACACAACAACGAAAACGATTCCACGCATCAGGAAGACCTGTACAAGAAACTTCGCGATGGCACTTACACGTGCGACATTTGTCAGATGACTTTCGAGCAGAAGAGCAAAATTCTTCGCCATATCACCAGTAAGCACAGTTTCCATCGACCCTTCAAGTGTTCGACTTGCGACAAAACGTTCAAATACAAATGCGACCTGAAGGCCCATCGACTGGTCCATCAGGACGTCGATATAAGTTTGTTGCACTGCTGCGATAAATGCGATTATCGCACAAAGACAAAGAACAATCTCAAGTCCCATTACATCAGGAGACACACAGACGATTATAAATTCGCGTGCGAACACTGTGGAAAACGCTTCAAGATGGAATGGGACCTGAAATTCCATATCGGAACTCACAGCAGTTCCCAGCACATGTGCGACATTTGCGGGAAGTTCTATACGAGTAATTATTCTTTGTACAAGCACAGAAAGGTGGCCCACTTGAACGAATATAAGTTTCAGTGTAACGTTTGCAACAAGAGACTCCTGACTCAGGAGAATCTGGACAATCACATGCAACAGCACAACAGAACGTACGAGTGCAAGGAATGCGGAAAGATATTTGCCTCGAAGAGGTACCTAGCAACGCACATGACCACGCACACGGGTGTGAATCCTTACACTTGTCACATATGCAAGAAGAACTTTCGAACGTCACATATGAGGAACACGCACTTTCTGACACATTCCGCGGAAAGGCCGCACATCTGCGATCTGTGCGGACAGTCTTTTAAGAGAAGCGAACGAGTGTGCAGTATGAAAGTCCTCACTACGGATTCCTCTGGCCGATTCATCGTTGGAAAAGACTCCGTGCCCATGCAGCTTTGGCAGCACGTCGATCCTAATGGTAAATTGCACTACTCATTGGTACCTGCGTCAGACGGTGGCAAAAGGTTCGAAGAAAATCCGGAAACCTTCGTGACATCTGTGAAAATGGAGAGCATGGAGCAACAGAATAACGCGAGCCATTGCGCTGACACTTTGATGCATTTATGCGAGGCGGCCGTCGACTTTCGCGCTTGTGATAAATGCGGCATGAAGTTTCCCATGGGAAGCATGCTGAGCAGGCACAGGATGTCTCACAATTTCAATTCTTGGTTGCGTAGAAAGCGATTGAACGCTGGTCATCGATTAACTTCGGGGAAGCAGAGTAAACCGGTGCAATCGCGGAGACAATTGCGAAAACGGAGATACGATTGCACATCCTGTGATTTTAACTGTAGCAAAAAGTCCACGTTGACCGTTCACATTCGAAAGAAGCACAGATCGTCGTCGAAGGACGATTCGAGAAGGATCTTCTGTATAATTTGTAACCGGAAGTACGACAGTCAAGCAAACTTGAACAAACACATGGAGAGTCATAGAGACAGTAAGACGAATTATTTCACGTGCAATAACTGCAGCTTTGCATGCAAGAGGAGCAGCACTATAGTCTCTCACGTGGCGCGAAATCATCAGAAGGGTAATGACGAAGAAGAGACTTGCTCGAAGAAGAGGTGCAAGGTGAACAGATACGATAACGAACCTTCAGTGAAGGAGGAATCGCAAGAGACCTGTTTACAAGATCAAGACAAAGACAGCTCGATCGTCTCCAGCACGCTCTCCGAATTCGAATGCAAAAGCGAGTCTTCGGTGACTATTCGCGCGAACAAGAAGCAAGGTAAGAAGCCCGTGGAAGAACAGTGCAATCTGTGCGACTTCAAGTGTTCGAAGAAGAGCACCCTTTACTCGCACAAGCGGCAGCACAAGATCATGGACATCAGCGAGGTGTATTCGTGTAACGAATGCACGTTCAAGACCAACAAAAAGTCGTCTCTGTACTCGCACATAAAGAGGAAGCATAAAATACCGAAATCCTGCACGCCTGATGGTCAGCCGCAGTTGTTTTACTGTAATCAATGCGATTACAAGAACAAGAACAAGTACGAGCTGAAAGTGCACGTGGCCAGGAAGCACACGGACGACTTCAAGTTCTCCTGCGAGACCTGCGGCAAGAAATTCAAAGTAAAGGGTGACTTGACCAATCACATACGCTTCAGCCACAAAGAACAACCGGTTATCTGCGACGTTTGCGGGAAAACATGCTTAAATAGTAATTCTCTGTACGTACATCAGAAATTTGCGCATTACAAGGCTAAATACGAGTGCCAGGTGTGTAAGAGACGAATGGTGACTCAGGAAAACTTGAACGAGCACATGATCAGGCAGCACGAGAAGAGGGAGAACGTGGTTTGCGAGGAGTGCGGCAAGACTTTCTCGAGGAACAGTAGACTGAAAGTCCACATGAGGATCCACACCGGTGATAAACCGTACACTTGTACCATATGCAACAAATCATTCGCTCGTAGAACTGCGTTGAAGCAACACTTGTTAATTCACACCGGCATCAGGCCGTATGTCTGCGATATTTGCGGCAAGGCGTTCACGCAGAAACCTGGACTGATCAGTCACAGTAAATCTCATCCTGGATCGCATCCGCCGCTTCCGAGAGTGCTGATCGACCATATACTGAATAACGTGATGAATAAT
Protein Sequence
DEVEVDQVLDKIRNTCPFCEKRFDNAKKVENHVTYVHRKPYKCDMCKRACHTARALEEHKMIHRPDYFFECETCHVKYKSEDSLKRHNMRTHSDYESKYVCEHCGRSYKLKIDLTHHMKRTHVSELQICRFCGKFNALDPLAPTFLIVKLEDNYFRIPTSLSVFMMKEPPPIEETNVQSSKDTVQTTKTSQPAEEKTKDNASTSDPFEDLDDAPLDFRKKQELEKNKTGKQLLKKKLHTCEICYATFDRKSKHTRHMYKHSNSRPHKCAICSKGFKTTAHLTRHMEVHDEPVNLHACSLCDFKARTKPYLKIHYIRKHTEDYNYKCEQCGKMFKVQSDYTTHVKDHDTESCVCDICGSSYPSKSSLYFHKHYKHKTKVKKFQCQTCKKKFKTQKNLDNHMELHKIKYVCEQCGMEFKTKYGLTKHLRTHSGEKSYLCAICGKTFGCLSSQKIHLLTHVGERPYVCDICGQSFTQRSPMMLHRRKHPGVHPPPPPIKITNLLHGVQDKIIVNKSSKKSTLPLPSKNKTIVGNETKEQLNTSHKSSSILQRRIAFRASKTRKRRSNRRLNNSSSCIEGKSISTSCANFERRKLNDEERNSTCSDKLHNNENDSTHQEDLYKKLRDGTYTCDICQMTFEQKSKILRHITSKHSFHRPFKCSTCDKTFKYKCDLKAHRLVHQDVDISLLHCCDKCDYRTKTKNNLKSHYIRRHTDDYKFACEHCGKRFKMEWDLKFHIGTHSSSQHMCDICGKFYTSNYSLYKHRKVAHLNEYKFQCNVCNKRLLTQENLDNHMQQHNRTYECKECGKIFASKRYLATHMTTHTGVNPYTCHICKKNFRTSHMRNTHFLTHSAERPHICDLCGQSFKRSERVCSMKVLTTDSSGRFIVGKDSVPMQLWQHVDPNGKLHYSLVPASDGGKRFEENPETFVTSVKMESMEQQNNASHCADTLMHLCEAAVDFRACDKCGMKFPMGSMLSRHRMSHNFNSWLRRKRLNAGHRLTSGKQSKPVQSRRQLRKRRYDCTSCDFNCSKKSTLTVHIRKKHRSSSKDDSRRIFCIICNRKYDSQANLNKHMESHRDSKTNYFTCNNCSFACKRSSTIVSHVARNHQKGNDEEETCSKKRCKVNRYDNEPSVKEESQETCLQDQDKDSSIVSSTLSEFECKSESSVTIRANKKQGKKPVEEQCNLCDFKCSKKSTLYSHKRQHKIMDISEVYSCNECTFKTNKKSSLYSHIKRKHKIPKSCTPDGQPQLFYCNQCDYKNKNKYELKVHVARKHTDDFKFSCETCGKKFKVKGDLTNHIRFSHKEQPVICDVCGKTCLNSNSLYVHQKFAHYKAKYECQVCKRRMVTQENLNEHMIRQHEKRENVVCEECGKTFSRNSRLKVHMRIHTGDKPYTCTICNKSFARRTALKQHLLIHTGIRPYVCDICGKAFTQKPGLISHSKSHPGSHPPLPRVLIDHILNNVMNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-