Basic Information

Gene Symbol
CAMTA1
Assembly
GCA_002201625.1
Location
NIJG01000273.1:2054199-2069207[+]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.4e-27 5e-23 80.8 5.0 2 85 47 130 46 133 0.91

Sequence Information

Coding Sequence
ATGGCGGGCTACAATCATTCGAATCCACAGCGTGTCGTCTATCACGCGACCTACCCGACGCCTCTCGCACCAAACGGAGATCCGATAAAACTTCCGGAGAATTTGGAGACCTTGCCACGAGCTGAACATTTTCCAACCCAGAGGCACCGATGGAACACCAACGAGGAAATTGCTGCCATCCTGATCAGTTTCCAAAGACACGCGGAATGGCAAAGTCGGGAGGTGAAGGTACGACCTCGAAGTGGTTCGATGTTACTCTACTCGAGAAAGAAAGTTCGTTACCGGCGGGACGGTTATTGCTGGAAGAAACGGAAAGATGGCAAAACTACACGAGAGGATCACATGAAGCTGAAGCTACTACAGAATCCAGACGTCGTCCTCGTTCACTACTTAAACGTTCCTTATCCGGACGGTGATGCAAAGCTAGCGGCGCTGCCACCGTGTCTCGCACTGCCGCCAGACAAGAAGGAGTGGACGCGAGACGAGCTGGCTTCCCAGCTTAGACCCATGTTCCTTGGTGGAGATGACGATCCAAACAATCCTCATCTTACACAACACGCGAATCATCCCGTTGACATGATAGTTTCTCAACTCTTGGACAGACAGAGAGCATCTTCCACTTCTTCTACCACCAGTACTCAGCTTGCACCTAGGAGACTAACACCGGACAATCAGGTTTCTTCGACTACCGGAGGTCAGCAATCGTCAACAACAGCCTCACCGGCACCCCGCGTATACTCAAGACATTCCCACACGACTCAAAGCCAACAGCCGGCTCCTCTAGTTTTAAGTTTGCAACAAATTCAAGGTGGTGGCGGTCTTCTGATACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCAGCAGCAACAGCAACAACAGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAACAACAGCAGCAGCAACAACAGCAACAGCAGCAGCAGCAGCAAAGTCAACAAGTGGAAATGCAACAGGTTACGGAGCAACAAATTGTGCAACAGACAAGCGTGGATAGAGAACAACAGACCCAGCAGGAGATAGACGCGCAAGAAAGTATGGACCGTTCTGCGGTGCAGTCGCTGCCAATCGGTGGCGCTGGTCCCGAGGTCACCGATTTCGCCGAGACCTTGGACCTAAGTCAAGAGGACATTCAGCGAACGTTGTCCGCGAATATGGTACCACCGTCTCCGTCGCCTTCCCCGGCGGATAACAGCATGATCAATCCGATGGATTTCATCGATTCCTCGGACGACGTTCTCGTGAATTTGGACGCGTTCGACGTGTTCGGTGATTTGCCAGAGCTGCACGATTTCGAGGCCGAACAGGCCAAGGCCGAAGAGAGAGGTGGATCCGATAGCGACGTGGGATGTCATCCTGGAACAACCGTCCATATTGCGGAGTACAGTCCAGAGTGGAGTTACACCGAAGGTGGTGTGAAGGTATTGGTCGCTGGTCCTTGGACCGGTGGAAGTAATTCTCAGTCTTACTCGGTGTTGTTCGATGCCGAACCGGTGGAAGCGTGTTTGGTACAACCAGGAGTGTTGCGGTGTCGTTGCCCAGCTCATGCTCCGGGAATAGCGTCCCTTCAGGTCGCCTGCGACGGCTTCGTTGTTTCCGATAGCGTTGCTTTCGAATATCGTCGGGCACCAACAACCGAGCCAAGTCCCGAACGAGCTCTTTTGGATCGTTTGGCGGACGTAGAGTCTCGTTTGCAAGGACCCGGTCCTCCATCTCCCGCAGCTCATCTGGAAGAGCGATTAGTGGCATACTGTCAAGATGCTGTTGTCCGTCCGTGGCGAGCCGGAGCGGAACCATTACAGTCCGGCGGCCCTACTCTCTTACATTTGGCCGCTGGACTGGGCTACTCCAGGTTAGCCTGCGCTCTTCTCCATTGGAGAGCGGAAAATCCTAGTAGCGTGTTAGATGCCGAAGTGGATGCCCTGAGGCAGGATAGCGCCGGTCTTACGCCACTTGCTTGGGCCTGTGCAGCGGGACACGCGGATACTGCCAGGATCCTCTACAGATGGAACGCAATGGCGCTTCGCGTGAGGGATTGTCAGAACAGAACAGCGACCGAGTTAGCGGCAGAGAACGGTCACACGGCGATCGCAGAAGAATTGAATCGACTCGAAGCGAGAAGACAAGACGAGAGGCTTTTCTTGCGACCCGCCAGCCCTAGTCCTAGGAGGCCATCTCAAGACAGCGGTCTCGATCTGGCGTTGTGTGGCTCGCCGCTGCTGGACAACATGGAATTGTTGCAAGAGGATGACTCGTCATTAGCCCTCAGCGAGCAGGGAATGGAAAGCGCTCCGACCCCTCAGGAGACTGTAGGGGAAGAAGACGCGAGGGTGCTGACATTGGCTGAGCAAATTATAGCAGCGCTACCGGAAAGGATCAAGAGAGCGGAAGGTGATTCTCCGTCTTCTTCCTCGCCACCTCCACCGGCACCGCCCTTGTCATCTCTGGAGGACGCCCTGATGGAACAAATGCCGCTCGATTCTGGAGAACTGTTCGACTCGTATCGCGACTGCAGCGGGGGTGCGGCGTCGGTCTCGGACGCGGACGCGGACGCTAGCCCATCCAGCCCATCCAGCAGTTGCTTAACGCCGGACTCGCCGTCTCCGCCGCCTACCACCGCCGACTTCTGCGAATTCTTACAGCTGCAGTTGCAACTGGACGGGAATAACGGCCACAACGGCCAGTACTATTCGACCGGCGGGGATCGGAAGTTCGGTAACGTGATGGGCTCTGGAATTTGAAGCACCGTGACAGGTGGAGGTAACGGAAACGGTGACGGGAACGAAGCGGACCTGAGCAGGCTCACTCTGTCCGATCGGGAACAAAGAGAGCTTTATCACGCGGCTAGAATGATCCAGAAAGCCTACAGAAATTACAAGGGACGCCAGAGGCAGGAGGAGGCCGAGAGACACGCTGCTGTACTCATCCAACAATATTATCGTCGACATAAACAGTACGCTTATTTTAGGCAAGCTACGAAGGCTGCTCTGGTGATACAAAGTAACTACAGGAATTATCGTTCGCGTCCAGGCTCGGCTAGCTCGAGACAGCAGGCGGTCCATCAGCAGGCCGCCCATCAGGCCGCGCGAAAAATCCAACAGTTCATGCGACAGTCGAAAATCAATTATGTAGACTTCTTGTTAGCACACGAAAGGCTTATCGTACGAAAGACATCTAAAGTTCTAAAGTCTCCCTCTTCTGTGTGTACTAATGCAGCTTGTCGTGGGACGATTCACGACCGGCTGCAGAACGCCAGGGCCGCCGGAAACGGGAACGGGAGGCCGCCAGCGGGCATTTTACGGGCGGTTGCTGTCCCCCAAAGCTCGCCCTCATCTAGCCCAGGGGCCAGCCTAGTAGCCGCCAACCCAGAGGTCACT
Protein Sequence
MAGYNHSNPQRVVYHATYPTPLAPNGDPIKLPENLETLPRAEHFPTQRHRWNTNEEIAAILISFQRHAEWQSREVKVRPRSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKLLQNPDVVLVHYLNVPYPDGDAKLAALPPCLALPPDKKEWTRDELASQLRPMFLGGDDDPNNPHLTQHANHPVDMIVSQLLDRQRASSTSSTTSTQLAPRRLTPDNQVSSTTGGQQSSTTASPAPRVYSRHSHTTQSQQPAPLVLSLQQIQGGGGLLILXXXXXXXXXXXXXXXXXXXXXXXXSSSNSNNSSSSNNNSSSSNNSSSNNSNSSSSSKVNKWKCNRLRSNKLCNRQAWIENNRPSRR*TRKKVWTVLRCSRCQSVALVPRSPISPRPWT*VKRTFSERCPRIWYHRLRRLPRRITA*SIRWISSIPRTTFS*IWTRSTCSVICQSCTISRPNRPRPKREVDPIATWDVILEQPSILRSTVQSGVTPKVV*RYWSLVLGPVEVILSLTRCCSMPNRWKRVWYNQECCGVVAQLMLRE*RPFRSPATASLFPIALLSNIVGHQQPSQVPNELFWIVWRT*SLVCKDPVLHLPQLIWKSD*WHTVKMLLSVRGEPERNHYSPAALLSYIWPLDWATPG*PALFSIGERKILVAC*MPKWMP*GRIAPVLRHLLGPVQRDTRILPGSSTDGTQWRFA*GIVRTEQRPS*RQRTVTRRSQKN*IDSKREDKTRGFSCDPPALVLGGHLKTAVSIWRCVARRCWTTWNCCKRMTRH*PSASREWKALRPLRRL*GKKTRGC*HWLSKL*QRYRKGSRERKVILRLLPRHLHRHRPCHLWRTP*WNKCRSILENCSTRIATAAGVRRRSRTRTRTLAHPAHPAVA*RRTRRLRRLPPPTSANSYSCSCNWTGITATTASTIRPAGIGSSVT*WALEFEAP*QVEVTETVTGTKRT*AGSLCPIGNKESFITRLE*SRKPTEITRDARGRRRPRDTLLYSSNNIIVDINSTLILGKLRRLLW*YKVTTGIIVRVQARLARDSRRSISRPPIRPREKSNSSCDSRKSIM*TSC*HTKGLSYERHLKF*SLPLLCVLMQLVVGRFTTGCRTPGPPETGTGGRQRAFYGRLLSPKARPHLAQGPA**PPTQRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-