Basic Information

Gene Symbol
NCOR1
Assembly
GCA_002201625.1
Location
NIJG01002242.1:5893-16349[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-08 1.4e-05 24.9 0.0 3 43 538 578 537 581 0.96

Sequence Information

Coding Sequence
NGGAACAGCGGTACCGTGGGTGGTGCACCAGGAGGTTACGTCGCGGTGCCGATGGCCGGTAGTCTCCGGTACATCCATTCGTATCCGTCGACGCCAACGTCGGCGTCGGTGCCGGCCGTGGCGACTATGGTCACCTCGGCTTCGTCGGCACCGACTCCTGTCCCCGTCCCAGCGCCAGCTGCTGCGCCAGCTAACCCGCCTACAGTTAGTCAAACACCGCCACCATTGCTTTCGGGGACTGCTTATGCCGCGAGAGATGCATATCGCAGCGCCACCAGCAATGTGAACGAGAGGATCGCCATCAGCGTGAGCAGCAGTCCTCTGTCGCAGATAGGTGTTGGAGTGGTTGCAGCCGAATATGCAGCGAATAGCGGTATAGGCAGTGGGATGGCCAGTGGAAGAGGGGATAGGCCGAGGATATCTCTTTTGCCACCTGCTTCGGTGACGCCGACACCTTCACCGACAGCACCAGACTATCAGCACGTGTCCAGTGCAAGAAATTCACGAATAGCCCTGATGCCCGTCCAGCTGGATCAGTATTGCAACCGTACGCCCGTTGAGATGGCCAATCTGCAGGAGGCGCCGCCCTTCAAGAAGATACGCCTCAGTCAACCGACCCAGATTCAATTGCAGTCTCAATCGCAATCTCGCTGTCATAGTCTGTCACCCGCTGACCCGTGCGTTAAGCAGGAGCACGTGGTGCATTTGCAACAACCACTTAGGATAGACACTAGGGAGCAGCCGGCAACAGAAGCGTATACTCCGCAGACTGAAGCAATTTCACCTACGCTTCCGGAACCAAATACGCAAGAAGATGCACAGTTTAGGAGCACCAAGGATGACCTTCTGCAGCAAATCTCTAAAGTCGACAGGGAGATTGCAAAAAGGGAGTCTCAGATAAATAAACTTCGGAAAAAGTTAAAAGAATTGGAAGAGACGGCTAATAAACCTCTGGAAGCCAGCGGTCTTAAACGTCAGGTTGAAGAACAGTCTCAGCAACCAAAGCATCAGTCTCTGGCACAAAAAATTTACGCTGAAAATAGGAAGAAGGCAGAAGAAGCTCATAGACTCCTAGAGAGGCTGGGTCCAAAAGTGGAACTACCTTTGTATAATCAGCCATCAGATACAAGTGTGTATCAAGAAAATCGAACGAAACACCAAACGTGTATGAGAGCAAGGCTTATAGCGAGGCTTCGACGAGAACACGCTGAACGCGCATCTCTTCATCGACAACAGTCACAAACGTACGCTATTTTGGTACAGGAATGGCATCGTAAAGTAGAGCGATTGGAAGCCACGCAGAAAAGGAAGTCGAAAGAAGCGAAAAATCGCGAATTCTTTGAAAAAGTGTTCCCCGAGTTGCGGAAACAAAGGGAAGACAAAGAACGTTTTAACAGAGTCGGTGCTCGTATCAAGAGTGAAGCTGATCTAGAAGAAATTATGGACGGCCTTCAAGAACAAGAGATGGAAGATAAAAAGATGCGTTCGTACGCAGTAATACCTCCATTATTATTGGATACAAAACAGAGACGAATCGCGTTTCAAAATCGAAATGGTCTTCTTCAACCGGAAGAATTAGAGGCTCTTCACAGTGAACGAAAGTTAATCAATGTATGGAGTTCTGTGGAGCACGAACTGTTTAAAGAAAAATATTTACAACATCCTAAGAACTTTGGAACGATAGCTCAATCTTTAGAACATAAGTCCGTTCCAGATTGTGTGCATCATTACTACCTCACTAAAAAAGCAGAAAATTATAAGCAGCTCTTGCGAAAGTCGCGGCAACGAACACGTAGCTCTCGAAACAATCCTAATAATAAAGTAAATAATACCAGTTCAAGTATTGGAACTCTAGATATTTTAACTACGGGTGTTACGACAAGGTTGCAACGTGAGCAACAACAAAAAACACAAGAGAATCCTCAGAATAGTTCGGCAGCGACATCAACTACAACGACGACGACTACGACTACGTCAAGCGTATCAACGGCTGTTGCGGCAACAATAGTGACAACTTCGACAACTCCTTTAAGTTCATCAACGTCGAGTATATGTTTAACGACTGACTCTGTAATAGCATCAACGACAGCTACAACGACATCGGTGTTGAGTACCACGACATCGTCTGTCACGACGTCGTCGACAACAACAGCGAAGGATAATAGGGAAATCAATAAAGAAAACAAAGAAAGTAAAATGGAGTCGAAAGAGTCGCATCTTATTAAAGTGGAAGTAAAGGAAGAGCCACAATTAAGTTCCGAAGCGGGGTCAGGAAAGGACGTCAAAGTAATG
Protein Sequence
XNSGTVGGAPGGYVAVPMAGSLRYIHSYPSTPTSASVPAVATMVTSASSAPTPVPVPAPAAAPANPPTVSQTPPPLLSGTAYAARDAYRSATSNVNERIAISVSSSPLSQIGVGVVAAEYAANSGIGSGMASGRGDRPRISLLPPASVTPTPSPTAPDYQHVSSARNSRIALMPVQLDQYCNRTPVEMANLQEAPPFKKIRLSQPTQIQLQSQSQSRCHSLSPADPCVKQEHVVHLQQPLRIDTREQPATEAYTPQTEAISPTLPEPNTQEDAQFRSTKDDLLQQISKVDREIAKRESQINKLRKKLKELEETANKPLEASGLKRQVEEQSQQPKHQSLAQKIYAENRKKAEEAHRLLERLGPKVELPLYNQPSDTSVYQENRTKHQTCMRARLIARLRREHAERASLHRQQSQTYAILVQEWHRKVERLEATQKRKSKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEMEDKKMRSYAVIPPLLLDTKQRRIAFQNRNGLLQPEELEALHSERKLINVWSSVEHELFKEKYLQHPKNFGTIAQSLEHKSVPDCVHHYYLTKKAENYKQLLRKSRQRTRSSRNNPNNKVNNTSSSIGTLDILTTGVTTRLQREQQQKTQENPQNSSAATSTTTTTTTTTSSVSTAVAATIVTTSTTPLSSSTSSICLTTDSVIASTTATTTSVLSTTTSSVTTSSTTTAKDNREINKENKESKMESKESHLIKVEVKEEPQLSSEAGSGKDVKVM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
80% Identity
-