Basic Information

Gene Symbol
Kdm5a
Assembly
GCA_002201625.1
Location
NIJG01000001.1:1681414-1691838[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.6e-25 4e-22 78.2 0.0 2 89 109 192 108 192 0.94
2 3 2.4 6.1e+03 -2.5 0.1 49 81 823 853 820 858 0.65
3 3 1.7 4.3e+03 -2.1 0.0 48 64 1032 1048 1030 1059 0.78

Sequence Information

Coding Sequence
ATGGTATCGAGGTTCGACACGAACTTCGGTTGTGAAGACTTTTTCGGGACTTATCGTTGCACCCAAGACATGGCTTGTGATCGTGGTGATTCGGACTTCGAGTTTATCATACCGCCAGATGCGCCGGTCTTCGAACCAAGCATCGAAGAGTTTCACGACCCCCTTGGCTACATCGCAAAAATACGACCGATTGCAGAGAAGTCTGGCATTTGTAAGATCAAACCGCCGCCTAATTGGCAGCCACCATTTGCTGTTGATGTTGATAAATTCAAATTTGTTCCAAGAATACAAAGACTAAATGAATTGGAGGCAAAAACTAGGATAAAACTTAATTTCTTGGATCAAATTGCAAAATTCTGGGAACTTCAAGGTTCATCTTTAAAAATTCCTCTTGTAGAACGCAAAGCTCTTGATTTATATTCCTTACACAAAATAGTTACTGATGAAGGTGGAATTGAAACAGTAACAAGGGAAAGAAGATGGGCAAAAATTGCAAACAAATTAGGTTATCCTTCTGGACGCAGTGTAGGAAGTATTCTAAAAAATCATTATGAACGTATTTTATATCCATTTGACGTGTTTAAGCAAGGGAAAACATTAACAGATATTAAAATTGAACCAGATTCTAATATAAATGAGAAAAAAGATAGAGATTATAAACCACATGGAATTATATCACGACAACAAATTAAACCTCCAACTGAGAAATTTTCACGTCGGTCAAAAAGGTTTACTGGCCAGGAAGAAAAGCAGGAAATACCTATTAAACAAGAAGATTGCAAAGAGGAATGTGACTCTGATAATGACTGTAAAGATGCAAATAGAAATAAACAATGTGATGACAAGGACAATAGTAAAGAACTTAAAAAATTGCAATTTTATGGACCTGGTCCAAAAATGGCAGGATTTAATACCAAAGAAGGGAAAAAATCTAACAAAACTAGAGGTGTAAAACTTGTCTATGAAGTTGATCCATTGGCAAAATACATTTGTCATAACTGTGGAAGAGGTGACAATGAAGAAAACATGCTTTTATGTGATGGATGTGACGATAGTTATCATACTTTTTGTCTTATGCCACCATTGACAGAAATACCAAAAGGTGATTGGAGGTGTCCAAAGTGTGTTGCTGAAGAAGTTTCTAAGCCAATGGAAGCATTTGGATTTGAACAGGCACAAAGGGAATACACTCTTCAACAATTTGGAGAAATGGCTGATCAGTTTAAGAGTGATTACTTCAATATGCCTGTGCATATGGTACCAACATCATTAGTAGAAAAAGAATTTTGGCGAATAGTTTCTTCAATTGATGAAGATGTAACAGTTGAATATGGAGCTGATTTACATACAATGGATCATGGGTCTGGATTTCCAACAAAAACAAGTGTCAATTTGTTTACCTGTGATCAAGAATATGCTGAATCTTCATGGAACTTGAATAACTTACCAGTTTTACGTGGAAGCGTTTTAGGACATATAAATGCTGATATTAGTGGTATGAAAGTGCCATGGATGTATGTTGGAATGTGTTTTGCAACATTTTGTTGGCATAATGAAGATCATTGGAGTTACTCAATTAATTATTTACATTGGGGAGAGCCAAAAACATGGTATGGTGTACCAGGCTCTCAGGCAGAACGATTTGAACAATCAATGAAGTCAGCTGCACCAGAATTGTTTCATAGTCAACCAGATTTACTTCATCAATTGGTTACTATCATGAATCCCAATATTTTAACAAGTGAAGGTGTTCCAGTATTTAGGACTGATCAGCACGCGGGTGAATTCGTAGTCACATTTCCGAGAGCATATCACGCAGGTTTTAATCAAGGATACAACTTTGCTGAAGCTGTGAATTTTGCTCCTGCTGATTGGCTGAAAATTGGACGAGAATGTATAACGCATTATTCAAATTTAAGACGATTTTGTGTATTTTCTCATGATGAATTGGTATGCAAAATGTCGTTGGATCCAGATTCATTAGATATAGGAATTGCAACTGCAACTTATCATGACATGCTCCAAATGGTAGATGATGAGAAGAAGTTACGGAAGAATCTATTAGAATGGGGTGTAACAGAGGCAGAACGTGAAGCATTTGAACTTTTACCAGATGATGAGAGACAGTGTGAAGCGTGCAAAACAACTTGTTTCTTAAGTGCAGTTACATGTTCATGCCAAAGTTCACAGTTAGTTTGTTTAAGGCATTTCACAGAACTTTGTGATTGTCCCCCAGAAAAGCATACATTACGTTATCGATATACATTAGACGAATTACCAATTATGTTACAAAAATTAAAGTTAAAAGCAGAGTCATTTGACTCATGGGTGACAAAAGTAAAAGAAGCAATGGATCCTGATAAAAAAAGTGATAAAATTGAATTAAGTGAATTAAAAGAACTCTTAAATGAAGCAGAAAATAAAAAATTCCCAGAAAGTGAATTACTTACAGCTTTAACAACCGCTGTGCAAGATGCCGAAAAATGTGCTAGTGTTGCACAACAACTTTTGAATAATAAGCAGCGAACCAGAACTAGACAATCTGTTGAAACAAAGTACAAGTTAACAGTAGAAGAATTAACACTTTTCTACAAAGAAATAACAAATCTGTGCTGTGAACTCAAGGAATCGGATGGAGTAAAATTTATACTTGATCAAGTATTGCAATTTCAAAAAGAAGCAGAAGAACTAGAATCTAAAGAGGAAAATTGTGATATTGAACAATTGGAGAAATGTATTGACTTTGGCGATTCTATCTGTATTGAACTACCTCAACTTGTACGTTTGAAACAGAAATTAGCACAAGTACAATGGCTTGAGGAAGTTAAGTCTATCCAAGAAGATCCAAAATCTATACATCGCGATGATTTATCAAAATTAATTGAAAAAGGTATGACAATGCCTCCTCACTTAGGTATAGAAAATACTCTTTCTGAGTTGCAAGGATTAATGAATGCAATTGATAATTGGGAAGAAAAAGCGAAGTTATATCTGCATACAAAAAGTAGACAAACTATTGCTTCTCTCGAAGAATTTATTCGTGAAGCTGATAAAGTTGAAGCTTACTTACCAAGCTTAGATGTTCTTCAAGATACCCTAAGTAAAGCAAAAAATTGGACAAAAATAATGGAAGAAATACAAGCTAGAGATAATTTCCCATACTATAATACATTAGATGATTTAATTAAAAAGGGAAGAAATATTCCTTTACATCTAGATGCTCTTCCAATCTTAGAATCTACTCTTTCACAAGCTAAAGCCTGGAAAGAAAGGACAGCAAGAACATTCCTAAGGAAAAATTCACATTATACTTTGATGGAAGCTTTGTCACCAAGAATTGGAGTTGGTATACAAGCACTGAAAGCTAAAAAGAATAAGAATGAAGACTCTGTAGGACCTGTTTTCGTCTGTGATACAAAATTGGACGATTCCAATGATTCAGCTATCATTGTAGCAGCGTTTAAATTAGCCGAACAACGTGAAATGGAAGCAATGCGAAATTTGAGGGAAAGAAATTTAATGAAAACTGAAATAGATGATTCCAGGTACTGTGTTTGTCGCCGGCCAAGATTTGGGCTCATGCTTCAGTGTGAGCTTTGTAAAGATTGGTTCCATTCAAATTGTGTACCTTTGCCAAAGACATCATATAAAGGAAAATTTCCAATGTCTAGGGAAATAAAATTTTTATGTCCATGTTGTTTACGTTCACGACGACCACGATTAGAAACAATTCTAGCACTTTTAGTCAGTCTTCAAAAAATTCCAATTCGTTTGCCAGAGGGCGAGGCATTACAGTGTTTAACGGAACGTGCAATGAATTGGCAGGATCGAGCCCGGCAAGCATTAGCAACGGATGAAATTTCGTCAGCATTAGCAAAACTATCTGTGCTATCACAAAAATTAGTGGAAGCAGCGGCGAGGGAAAAGACAGAAAAAATTATTAGCAGTGAATTGAAAAAAGCTGCAAATAATCCGGAACTACATCAGAGGGTACAAGCAATTGCACCGCTTAGTGGTGTACATTCAGATGACAGTGCACTTAGTACAGCGGATGATGATGACGATGTTGTCACTATAGACGATGACGAGCCAAGTTGTAGTACATTCAACAGCAACGAACATGCATATTCTTATATATCGAAAATTCAACGCAGAACGCAATCAAATGATGCGACAGATGTTGCTGTTGTACTTTCTCAAGCAGCGAGATTACGGCTGGAAGAATTGATGATGGAAGGAGATTTATTAGAAGTTGCACTCGATGAAACACAACACATCTGGCGTATTTTAAGTCATACAAATAGTCCCAGTACAGTTCGAAAGTATGCATCGTATGAAGAAGTTCAAACAAACTTGAACCAAGATATAAAGGATGTAAAAAAGCGCGGAAGAAAGAGAAAATCCGAGGAATTCGAATTATTGAAAAAACTTGGAAGGCAAAAAATGGAAGAAAAAAATTTAGCTAAGCGCAAAGGTTTACAAAAAGAAAAAAAATCAGCCGGTTCCCCGTTGCCAATAAAACGTGGACCTCGAAAGATGAAACGCAAAGAAGGCGAAGAAGGTCCAAAAAGGAGGGGTGGTAACAGAAAGAAAACTAAACAGGACACTTCAGATGAAGAAGACGATTGTGCGGCTGTCAGTTGCTTACGACCTAGCGGTAGGGAAGTTGATTGGGTGCAATGTGATGGCGGCTGTGAAGGTTGGTTTCATATGCATTGTGTTGGATTAGATCGTACAGAAATTGCAGAGGAAGACGATTATATATGCAGTAATTGTAAAGATGCGGAACAGAATTCTACGTCAAGAGCGCCAGATCCCCTAGCTGAATCATTAGGCCTGGATGCACTTCTTTCCCTTTCTCAATCTCAGGGGTACCAGGGCACAGATAGTGAAGCAGACATTCAAGAAACGACATCCTTCGTCAGGACTTAC
Protein Sequence
MVSRFDTNFGCEDFFGTYRCTQDMACDRGDSDFEFIIPPDAPVFEPSIEEFHDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTDEGGIETVTRERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLTDIKIEPDSNINEKKDRDYKPHGIISRQQIKPPTEKFSRRSKRFTGQEEKQEIPIKQEDCKEECDSDNDCKDANRNKQCDDKDNSKELKKLQFYGPGPKMAGFNTKEGKKSNKTRGVKLVYEVDPLAKYICHNCGRGDNEENMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEQSMKSAAPELFHSQPDLLHQLVTIMNPNILTSEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRECITHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCQSSQLVCLRHFTELCDCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPDKKSDKIELSELKELLNEAENKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVETKYKLTVEELTLFYKEITNLCCELKESDGVKFILDQVLQFQKEAEELESKEENCDIEQLEKCIDFGDSICIELPQLVRLKQKLAQVQWLEEVKSIQEDPKSIHRDDLSKLIEKGMTMPPHLGIENTLSELQGLMNAIDNWEEKAKLYLHTKSRQTIASLEEFIREADKVEAYLPSLDVLQDTLSKAKNWTKIMEEIQARDNFPYYNTLDDLIKKGRNIPLHLDALPILESTLSQAKAWKERTARTFLRKNSHYTLMEALSPRIGVGIQALKAKKNKNEDSVGPVFVCDTKLDDSNDSAIIVAAFKLAEQREMEAMRNLRERNLMKTEIDDSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTSYKGKFPMSREIKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPEGEALQCLTERAMNWQDRARQALATDEISSALAKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSALSTADDDDDVVTIDDDEPSCSTFNSNEHAYSYISKIQRRTQSNDATDVAVVLSQAARLRLEELMMEGDLLEVALDETQHIWRILSHTNSPSTVRKYASYEEVQTNLNQDIKDVKKRGRKRKSEEFELLKKLGRQKMEEKNLAKRKGLQKEKKSAGSPLPIKRGPRKMKRKEGEEGPKRRGGNRKKTKQDTSDEEDDCAAVSCLRPSGREVDWVQCDGGCEGWFHMHCVGLDRTEIAEEDDYICSNCKDAEQNSTSRAPDPLAESLGLDALLSLSQSQGYQGTDSEADIQETTSFVRTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00873598;
90% Identity
iTF_00141055;
80% Identity
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