Basic Information

Insect: Eufriesea mexicana
Gene Symbol: -
Assembly: GCA_001483705.1
Location: NW:36810-44267[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 2 1.1e+02 2.8 1.7 2 21 109 128 109 129 0.93

2 22 0.43 23 4.9 0.0 1 19 134 152 134 155 0.79

3 22 0.78 42 4.1 5.8 1 23 167 190 167 190 0.94

4 22 0.00049 0.026 14.1 4.1 1 23 537 560 537 560 0.92

5 22 0.1 5.6 6.8 1.5 2 23 593 614 592 614 0.95

6 22 3.5 1.9e+02 2.0 4.1 1 21 641 661 641 662 0.91

7 22 0.00035 0.019 14.6 1.4 1 22 760 781 760 781 0.96

8 22 3.9e-05 0.0021 17.6 0.2 2 23 789 811 788 811 0.94

9 22 0.012 0.66 9.7 5.9 1 23 821 844 821 844 0.95

10 22 1.5 79 3.2 0.3 2 19 864 881 864 884 0.92

11 22 0.0091 0.49 10.2 4.3 1 23 891 914 891 914 0.96

12 22 0.0011 0.061 13.0 3.5 1 23 925 948 925 948 0.94

13 22 0.0089 0.48 10.2 0.0 1 19 988 1006 988 1008 0.95

14 22 0.03 1.6 8.5 0.8 1 23 1016 1039 1016 1039 0.91

15 22 0.022 1.2 9.0 0.2 1 23 1102 1124 1102 1124 0.94

16 22 0.012 0.63 9.8 1.9 1 23 1130 1152 1130 1152 0.96

17 22 0.0019 0.1 12.3 0.9 1 23 1161 1184 1161 1184 0.93

18 22 3.6e-05 0.0019 17.7 0.2 2 20 1240 1258 1239 1260 0.93

19 22 0.037 2 8.2 1.0 1 23 1267 1289 1267 1289 0.98

20 22 0.004 0.22 11.3 2.5 1 23 1299 1322 1299 1322 0.93

21 22 0.03 1.6 8.5 0.8 1 23 1406 1429 1406 1429 0.96

22 22 0.034 1.8 8.3 0.5 2 21 1450 1469 1449 1470 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	2	1.1e+02	2.8	1.7	2	21	109	128	109	129	0.93
2	22	0.43	23	4.9	0.0	1	19	134	152	134	155	0.79
3	22	0.78	42	4.1	5.8	1	23	167	190	167	190	0.94
4	22	0.00049	0.026	14.1	4.1	1	23	537	560	537	560	0.92
5	22	0.1	5.6	6.8	1.5	2	23	593	614	592	614	0.95
6	22	3.5	1.9e+02	2.0	4.1	1	21	641	661	641	662	0.91
7	22	0.00035	0.019	14.6	1.4	1	22	760	781	760	781	0.96
8	22	3.9e-05	0.0021	17.6	0.2	2	23	789	811	788	811	0.94
9	22	0.012	0.66	9.7	5.9	1	23	821	844	821	844	0.95
10	22	1.5	79	3.2	0.3	2	19	864	881	864	884	0.92
11	22	0.0091	0.49	10.2	4.3	1	23	891	914	891	914	0.96
12	22	0.0011	0.061	13.0	3.5	1	23	925	948	925	948	0.94
13	22	0.0089	0.48	10.2	0.0	1	19	988	1006	988	1008	0.95
14	22	0.03	1.6	8.5	0.8	1	23	1016	1039	1016	1039	0.91
15	22	0.022	1.2	9.0	0.2	1	23	1102	1124	1102	1124	0.94
16	22	0.012	0.63	9.8	1.9	1	23	1130	1152	1130	1152	0.96
17	22	0.0019	0.1	12.3	0.9	1	23	1161	1184	1161	1184	0.93
18	22	3.6e-05	0.0019	17.7	0.2	2	20	1240	1258	1239	1260	0.93
19	22	0.037	2	8.2	1.0	1	23	1267	1289	1267	1289	0.98
20	22	0.004	0.22	11.3	2.5	1	23	1299	1322	1299	1322	0.93
21	22	0.03	1.6	8.5	0.8	1	23	1406	1429	1406	1429	0.96
22	22	0.034	1.8	8.3	0.5	2	21	1450	1469	1449	1470	0.87

Sequence Information

Coding Sequence: ATGGCTCGAGCCATTGTCTACGAACGTCCTGTCGATGCAGTGTTTATGGGTGTGGTGATGGGTCACCAAATGAATCCTCCCCAATAtggaacaaaaataaaagaagagccAACTGATTCAGAGATTAATAGCCATGCTGATTCTCCATCGGTTGATGTAAATACGAACGTTCAGAATAACATAATAAAAGTTGAGAATAACTCTTCAGATGCGGAAGACAGTATATCTGTGTTACCACAAGAGTCAGCTGATTCAGGAAATAGCATATTTGATCTTTGTAAAGAAATACTTAATATTAAACAACCTCGAAAGCCGGTAAAAAACTATTGCGATATTTGTTTTGTAATCTGTCGTAATAGACGTGTTTTGAAATCACATAAAAGATCCTTCAGAGGAAAGTTCAAGTGTCCTGATTGTAATGCAATTTTCGGTGggcaaaaaatattagatcgTCATGTGAATTTACGTGTTTGTTCAAGAGGTGTTCAGTTACCAGGATTTTATTGTAGCTTTTGTAATCGACATTTCTACGATAAGTTACGTATGCAATCTCATATATTACACATACACGAAAATAAAGATTTAATGAATTCGGCCGAAGTTGAAGTGCTTCCTCAAACGACACAAGAGATAAATGATATGAGTCGTGTGTTAATGGAAAAATTACATAATCTAGAGAGCACCGCCACAAACCGTCCAAGTAGTTCAATGGATGATCATTCGAAAAAGATGAATAGTGCAAATAATACACCCCCCGAGAGAAGTGTAAATAACACGCCTTCGGAACACTTAAACAATTCAAGTAATTCTACGCCGTCAAGAAAGATGAAGCAGACCATTCTTACAGATTACATGTCGTTGTATAAAGAAAAGCCGAAGGATGATTGCGTTACTGCAGAGAAAGTCGATAATGCAACAAACTCTGAAATTTCTACCAGTTCAAATACAATATCTGAAGTAGTTAGTAACGAGATACCAACGACTTCAAAACAATCTAAAGCGTCTACTTCTAAACGTTCTAAGTCTAGTGGGTCCCAGAGCAAAAAGCCATTTGTGCAGATTCATGTGAATTCTAGTACAATGATATCTTTATTAAACAAGGAGATAAAAACTGAACCTGAAAGCTCTACTCCTTCATTCTATTCGTCTTATAATCTTAGGCCAGGAAGGATAAATTCTTATTCTCCTTACCACAATTTAATCACGTTTCGTGCTTCTAGAAAAGCAAGGCGATCttataaaagaaagaaagctcTCAATGCAGCTAAACAAAAAGAAAACGCATTATTACTAGATAAACAGTTGAAATCTGAGCTTAAGTATAAAGAGTGTATaattcgtttggataggtgtgaCAAAGATCTAAAATCATATAGTTATAAATCAGATGAAGAGGAAGAAGCTTCTGAAGAAATGGTCCTACGAATGGTAGATGAAAATTCTGAGGATTCTCAAAAATTGGACATGGTAAGAAATTTTTTCTTGACAGATGTGACAGTTCCATCAGAGAGTACAGAAAAGATCATTGCCAGTGAATCGGTACCTCAAGAAAACACAGATGTACCTAAAGATGACGTACGTGTCGTGAAAGTCAATGAAAAGAAACCATTTCTGTGTCACGTTTGTAAGAAATCATTTTCTTTGAGGGAGAACCTGCATGAACACATGGAACTGTTTCATGCCATTTATATGTCTAGTATATGCAGTGCGCGTTACACGACCATGAATAAGTTATTAAGTCACTATTTCCGCCAACATATTATACTGAAACGAAAGGAATGTTGCGTATGTTATGagaaatttaagtcatcagctATACTGAGGCAACACATGGCCTTACATTGCTTGAAAACCATACGATCCAGGAAAGACCTTCTACCAGTAGACGTTGAGGTAAACTGTAATGCATTCAAGAAACGACACAAGTGCAAAGCCTGTCATAAACGATTTTGGCTAAATTCATGCTTGGAGCAACACGAGAAGGTGTGTCGTCGGATGAAAGCTTTAATGCATAAACAGCAGATAGCTCGCATAAAACGTTCCCCTTCGAACTCTTCAAAGGAATCAAAAAGCTTGAAAGCTAGCCCGGTACGGTCACCCGAACTGGAAAAGATGATGTTAGAAGAAACGGAAGAACTTGTGGTCAATCCAGTCGCGAGTACGCCTACTACTAGTGACATCGGTTTACCAACCCGTACAGTTGTGAGTAAGAAAAAGCTTCTTAATGGTGTTGCATGTGTAAAAGGGTACCAGTCTAACATGATGGATAGAGCGAAGTTTCCATGTACCATTTGTGGAAAACAGTTCCAAACATTTCAGAATTTATGCATACACGAACGTACGTTTTGTAAACCAGCCAGCAATCAGTGCAATGTTTGTGGTACCGCATTTCCTACCAAAAGATTGTTACAACTTCACATGCTTGCCACCCATACACCGGCGTGCGAAGAGAATTACAGGTTTTTCTGCAAGTTTTGTCATCAGGGCTTCGTTAAAAAAGCAAATCTTCGGATTCATGAACGACATTTTCATGCCGGCCAGGTGCCTAACTCTACGCTGAACTCAGAGTGCATTTGGAATCTTAGCCCAGTGTGTAATACATGCAATTTGCTATTCGAGTCTTACGGACACTTCATAGAACACAACATGTATTACTATAAGGGGCAAGTCTTTGTATGCACGATATGCAATAAATCGTTCCAAGGAATGTACAGTCTTCATCATCACAATAAGATGGAGCATTATTCGGATGACGTACGGAAGTTGTATGCTTACAAGTGTAACATTTGTAACGAAGGCTTCAATTATGAATCGAATTTTCATGCACATAAATTACACGTTCATTTACATGATGCACCAGTTATACAAAATGCTTTAAATACCATGCAAGATCATAGTTATGCGTTAACAAATAACAGTGTCGTAGCAACCGAGATTCCCATAGAAATATGTTCGAAGAATTATGTGTGCAATGTGTGCACTTTAAATTTCACAAACGAGAAGGATCTATTGATACACGAAATAGAATATTCCGAGGGCGGTGAATATCAATGCGAGGAATGCAACCGAAGATTTCTTACCAATTCCATCCTCGCCAAGCATTACAGTTTAAATCATACCAGCAGCGAAATTAACAACAGTTTCAAGTGTTGCACTTGCGGCGAGGTAATAACAACCACTATGGCAATGGTGTGTCACGAGAAACACTTCCACACGGATAATAGTAATCTTAAAATTAGTAATAACATAGTAAGTCAGTTGAGTAGGATTAAAGAACTCAGCATGCTAATCGACGATTCCAACTTTACGTGTATAACTTGTGGTATGAAATTCGACGACAAGATCGGCTTAAAGGATCATTTGTTGGAGCATTCGGATATTGGCCCACATAGCTGTACCATCTGTCAAAGGAAATTTACCGAATTGTATCTTTTGGGAGTGCACAAAATCAAACACTGTACACTTAGCAGTTTGTCCCCGCACCGATGCCCTATATGCAACGAAGGATTCGCGGATCCTGCGAATGTTCATTCGCACGTGTCACACCTGCATCGATTTGAAACGTTCAGTTTTACTAATTTCTTTAACGCATCTAACCCTTCTAAAGCTGGTCTTAATGCTCAGAAGAATTTATCATACTGTCCATCCAGTCAGTTGTCCGGAACATCTGACATTTCCACTCCGTCTTCCAGCGATCATGTCCAGGTAGAAACGATGAAGTGTCCTGAATGCAACATAGCATTCAGTAGTAATAAGAATTTAATGAAGCACAGGGCGCGATTCATAAATTCTGGAGATTATCAATGTGCAGTATGCGAACGTAGATTTCCATGGTTGACGACGCTTGAGCAACATTTACATAAGCACACTAACGTTGACAGCCCTTTCTTGAAGCACGAGTGTCCCCATTGCAATGAGAAATTTCGAAGCTCCGTTGCCGTATACTCACATATTATTCACATTCACGGCAGAGATAAATTGTTAACGCATACGAATAGCGATGTAAGTAAGTTTGTAACTAACAGTGTTGATATCGATGAATCCATTTCTACCAGTAGTACTTCCGCAAAAGAAtctcaaaatatttataataaaagcaaTGCGGCTTTGAATACATCGGTCTCAGGTACAGGAGTTCATAACGTGAGAAGATGTTACGAAGCGAAAAGGCATGAAGCAAATCCAGTATTAGACAGGCTGGAAAAGTCGTTTTATTATACTTGCCTGATATGTAATCTACAATATCCGACGTTGAAGATGTTTCAATCACACTTTAAGATAATACATGGGAGAAGTAACGATCATAACAAAGCAAACAAAGCACAGTGTGATGTTTCCGATGTTATACATTGTACGAATTGCGATAAAACTTTCAGCAGTGGAGAGAAATATGACGATCACATATTGAAGCTTTATTCCGGTGAACAAGATCAAGTTCTATGTGTCAATCAGGACCAATCCGAAAGTCCTGCCCTTCCGCTGGACGAAGAGAATGATGGAATAGAAATTATTTGGGAAAAGAATGTGAATCCTCCTAGTACAATGACCGACGCAGGAGTGACGGAGTCGGGTGCCCAGGTGGCTAATAAAGATGTTGCAAATAACAATGATACTACACCAGCGCCAAATGATGTAATTCCAGTAAACAAAGATGTTGGGAAACTGAAAGTTAGGGCATTTGCAAAGTTCGTGGAGGACTAA
Protein Sequence: MARAIVYERPVDAVFMGVVMGHQMNPPQYGTKIKEEPTDSEINSHADSPSVDVNTNVQNNIIKVENNSSDAEDSISVLPQESADSGNSIFDLCKEILNIKQPRKPVKNYCDICFVICRNRRVLKSHKRSFRGKFKCPDCNAIFGGQKILDRHVNLRVCSRGVQLPGFYCSFCNRHFYDKLRMQSHILHIHENKDLMNSAEVEVLPQTTQEINDMSRVLMEKLHNLESTATNRPSSSMDDHSKKMNSANNTPPERSVNNTPSEHLNNSSNSTPSRKMKQTILTDYMSLYKEKPKDDCVTAEKVDNATNSEISTSSNTISEVVSNEIPTTSKQSKASTSKRSKSSGSQSKKPFVQIHVNSSTMISLLNKEIKTEPESSTPSFYSSYNLRPGRINSYSPYHNLITFRASRKARRSYKRKKALNAAKQKENALLLDKQLKSELKYKECIIRLDRCDKDLKSYSYKSDEEEEASEEMVLRMVDENSEDSQKLDMVRNFFLTDVTVPSESTEKIIASESVPQENTDVPKDDVRVVKVNEKKPFLCHVCKKSFSLRENLHEHMELFHAIYMSSICSARYTTMNKLLSHYFRQHIILKRKECCVCYEKFKSSAILRQHMALHCLKTIRSRKDLLPVDVEVNCNAFKKRHKCKACHKRFWLNSCLEQHEKVCRRMKALMHKQQIARIKRSPSNSSKESKSLKASPVRSPELEKMMLEETEELVVNPVASTPTTSDIGLPTRTVVSKKKLLNGVACVKGYQSNMMDRAKFPCTICGKQFQTFQNLCIHERTFCKPASNQCNVCGTAFPTKRLLQLHMLATHTPACEENYRFFCKFCHQGFVKKANLRIHERHFHAGQVPNSTLNSECIWNLSPVCNTCNLLFESYGHFIEHNMYYYKGQVFVCTICNKSFQGMYSLHHHNKMEHYSDDVRKLYAYKCNICNEGFNYESNFHAHKLHVHLHDAPVIQNALNTMQDHSYALTNNSVVATEIPIEICSKNYVCNVCTLNFTNEKDLLIHEIEYSEGGEYQCEECNRRFLTNSILAKHYSLNHTSSEINNSFKCCTCGEVITTTMAMVCHEKHFHTDNSNLKISNNIVSQLSRIKELSMLIDDSNFTCITCGMKFDDKIGLKDHLLEHSDIGPHSCTICQRKFTELYLLGVHKIKHCTLSSLSPHRCPICNEGFADPANVHSHVSHLHRFETFSFTNFFNASNPSKAGLNAQKNLSYCPSSQLSGTSDISTPSSSDHVQVETMKCPECNIAFSSNKNLMKHRARFINSGDYQCAVCERRFPWLTTLEQHLHKHTNVDSPFLKHECPHCNEKFRSSVAVYSHIIHIHGRDKLLTHTNSDVSKFVTNSVDIDESISTSSTSAKESQNIYNKSNAALNTSVSGTGVHNVRRCYEAKRHEANPVLDRLEKSFYYTCLICNLQYPTLKMFQSHFKIIHGRSNDHNKANKAQCDVSDVIHCTNCDKTFSSGEKYDDHILKLYSGEQDQVLCVNQDQSESPALPLDEENDGIEIIWEKNVNPPSTMTDAGVTESGAQVANKDVANNNDTTPAPNDVIPVNKDVGKLKVRAFAKFVED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -