Basic Information

Insect: Eufriesea mexicana
Gene Symbol: ham
Assembly: GCA_001483705.1
Location: NW:310966-339325[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0034 0.18 11.5 0.3 2 23 319 341 318 341 0.95

2 9 0.49 26 4.7 0.1 1 23 348 371 348 371 0.93

3 9 1.3e-05 0.00068 19.1 1.4 1 23 377 404 377 405 0.93

4 9 4.2e-06 0.00022 20.7 2.6 1 23 411 433 411 433 0.95

5 9 2.1e-05 0.0011 18.4 6.0 1 23 439 461 439 461 0.99

6 9 0.00027 0.014 15.0 0.7 2 21 469 488 468 489 0.95

7 9 6e-09 3.2e-07 29.6 1.2 1 23 844 866 844 866 0.99

8 9 3.1e-07 1.7e-05 24.2 1.7 1 23 872 895 872 895 0.97

9 9 8.8e-06 0.00048 19.6 3.4 1 23 901 923 901 923 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0034	0.18	11.5	0.3	2	23	319	341	318	341	0.95
2	9	0.49	26	4.7	0.1	1	23	348	371	348	371	0.93
3	9	1.3e-05	0.00068	19.1	1.4	1	23	377	404	377	405	0.93
4	9	4.2e-06	0.00022	20.7	2.6	1	23	411	433	411	433	0.95
5	9	2.1e-05	0.0011	18.4	6.0	1	23	439	461	439	461	0.99
6	9	0.00027	0.014	15.0	0.7	2	21	469	488	468	489	0.95
7	9	6e-09	3.2e-07	29.6	1.2	1	23	844	866	844	866	0.99
8	9	3.1e-07	1.7e-05	24.2	1.7	1	23	872	895	872	895	0.97
9	9	8.8e-06	0.00048	19.6	3.4	1	23	901	923	901	923	0.99

Sequence Information

Coding Sequence: ATGAACGGTCTCGATCTGTCTCGACCCATGGTCGACTACAACAAGATGAACGGAAGCAGCGACGAAGGCGAGTCGACGTCGGGTACGCCGGCCGGCGGAGGCACGGGGGGGACTGGCGAAAACCAGGATATGGAAGAAAACGGTTCGATCCGTGGCGGTAGCAACAACTCCGCCTACAATCTGGTGTACAGGGACCTGAAGGCTCTTCACGTGACCAACGTGCACGACGTGTCCCAGGACTACAACTCGCAGTCGAGGCCGGCTTATCAACGCAGTTACTCGCCCGCTATGGACAAGCAGCAGCAGAATTACGAGAAGGAGCAACACAGACCACCTTCGTCCAGGGACGAGGAGAAATCATCGTGGGACTACGGCGAGAAGGCTGACAGAAAGGAGTACTCGAGGTCGCGGGACGTCGTCTACAGGAGCGAAGCTTACCAGGACGCGACGAAGCAGGAACAGAAGGAGCAATCTAACCGCGAGTGGGTATCACCGGTGCCGGAAGTCGAGGTGGGAGGCTCGGCACCGGGCGGCCCTCAGGTTCGAGCGCGGAAGGACATTCCACGGGGCGCGAGATTCGGTCCTTACCTTGGCAAATGGGCCAGCGAGCCTTTCAACCCCCGCTACGCGTGGGAGGTTCGTACCGCTGGAAGTGGAGTGAGGGGGTGGTTGGACGCATCCCACGAAACAAATAATTGGTTGAAGTATGTTCGAAGCACTAGCAGTCCGCACGCCGTTAATATGCGACACGTGCTTATTGGTGGACAGATGGTGTACGAGGCGGTCCGGGACATAGCGGCTGGTGAAGAGCTGCTTCTCGGTGTTCGAGAACCTCTTCAGCTTCAGGACATGCTCGGTGAAAATACTACCGAGGACCGAAGCGACCGAGAGACCGCCTCTCAACACAGTGGTACCGTAGACGAGGACAAGGAGGACGAGGAGGAGGGTGAGACCAGATGCCCCGTCTGCGACAAGCCGTTCCAAGATATCGAACTATTGGATAGCCACCTGGTCACCTGTCACAAGTATCCAGCGGAACATCATCGTTGCGACAGCTGTCCACGAGCGTACGCCTGGCGACCACTGCTGGTTCGTCACCGTGCCATCGTTCACGGTGATCTACGCAACTACCCCTGCGAGAATTGTCCAAAGTCGGACAAATCGCAGGTCTTCACGGACCCGTCGAACCTCCAGCGTCACATCCGGACACATCACGTGGGCGCGAGGAGTCACGCGTGCACCGAGTGCGGGAAGACGTTCGCGACCAGCTCCGGTCTCAAGCAGCACACTCACATCCACAGCAGCGTGAAACCGTTCCAGTGCGAGGTGTGCTTCAAGTCGTACACGCAGTTCTCCAATCTATGCCGACACAAACGCATGCACGCGGACTGTCGCATGCAGATCAAGTGCGGTAAATGCGGACAGTCGTTTAGCACGGTCACCTCGTTGTCGAAGCACAAGCGATTCTGCGACTCTACCCCGTCGACCGGTCCACCTGGCACCATGCCGCAATTGCCAACCCCGGCGCCTAGTCCTTTCCTCGTCTATCCCAGACCTCCCGTCAGTCTCCCGGGAGGATTGCCCTTCTATCCGCCCAGTCTGATGGGACCTTACCCAGGAATCTTTCCGAATGCTCCGAATTTCTTGAACACGCCTCTCCTCTTCCCGCCGAAAGTCGAGGAAGCCGAGAAGAGGAGCGACAGTCCGAAGAAGGAACGATTCACTCCGCCGAGAGTGCTGCCGCAGCACAGTAAAGTCTCTCCATCCACCGCCGAGGAGGCTACGTCCTCGTTCAGACCATCCCCTGCTAGACCACCCATCCAACCCACTCCGGAGAGCGACGACCATCCTGCCAGGAAACGCAAGAGGAGCAGGAGCAACGAGAAGAAAGTGGACTCGGAGCACGTTCCATCGACCACGAACGAAGAGACGACGGATCAACCCCTGGATCTGAGAGTGCAAACGAAGAGGCAAAGGACAAACTCGAACACCGCCGAGAGAAAGAGTCGCAGCCCGTCGCCGACACCAGCGCCGATAGAGGAAGACCCACCGCCTCCGGATCCTCCGAAACCAGAGGAAGAGACCCCGTTGTCCATGGAGATGGATTCCAAGGACGTGCCCAATAGTCCACAGCTGAGAAACAGTCTATCCACCGAGCAACCGCCTACCAACACTCCACCGCACATGGCGTACCCTAGACCGATCCACCCTATGTTTCTAGAAGCCATGTATCGCGGTCCAACCAGTTCCTTCCCGGGATTCCCAGGTGGCCCACCACCTCCCGGAAGCGCGACCCCGGAATCCAGACTGTTACCGCCGTTACCACCGTTCGGGCCACCGCGAGGACTACCTTTTTTAGGGACTCTGATGAACGGGCTCAGCGGTGCTAGGCCAGGAGGCGGTGGATTCGATCTGCTCGCCAGGCCGCCGTTGGGACCGTTCCCCGGCGTGAAACCGTTCCAAGAGGCCGTGATTGCGTCgcatcatcatcaccatcatcatcacgCTCACGGCAAGATGAAGGATCGGTACTCCTGCAAGTTCTGCGGCAAGGTGTTCCCCAGATCGGCCAATCTGACCAGACACCTGCGCACGCATACCGGGGAACAACCGTACAAGTGCAAGTACTGCGAACGATCCTTCAGCATCTCCAGCAACCTGCAGCGACACGTGAGGAACATCCACGACAAGCAAAGACCGTTCAAGTGTCCTCTCTGCGAGAGGTGCTTCGGTCAGCAGACGAATCTGGACAGACACCTGAAGAAGCACGAAGCCGATGATGGCAGTGGCGTTGTCTCCGTGGCGGATTCTCCTGGCAGCAGCAACGAAAACGAACGGGAGGATACGTACTTCGACGAGATCAGGTCGTTCATGGGAAAAGTGACCTACGGTGGCGAAGCTGGCTACGGATTGCCGCCTCATCCGGCCTATTTGCCCAGTCGACTTCACGAGATGCACGAGTCCAAGCTGGAAACCGAGtacgacgaggacgaggacagCGAGGAGGGTGCCTCTCCGTTGGACGACGCGGATGGCCTGTCGCCAGCAGAGACCAAGGAGTCCACCCCGCCGCCGCAATACGATCTCAAGCTGAGAGAGAAGCAGGAACTGCTCAACAACAACACGGCCGAGCCTGTCATCGAGATTTCCACATAG
Protein Sequence: MNGLDLSRPMVDYNKMNGSSDEGESTSGTPAGGGTGGTGENQDMEENGSIRGGSNNSAYNLVYRDLKALHVTNVHDVSQDYNSQSRPAYQRSYSPAMDKQQQNYEKEQHRPPSSRDEEKSSWDYGEKADRKEYSRSRDVVYRSEAYQDATKQEQKEQSNREWVSPVPEVEVGGSAPGGPQVRARKDIPRGARFGPYLGKWASEPFNPRYAWEVRTAGSGVRGWLDASHETNNWLKYVRSTSSPHAVNMRHVLIGGQMVYEAVRDIAAGEELLLGVREPLQLQDMLGENTTEDRSDRETASQHSGTVDEDKEDEEEGETRCPVCDKPFQDIELLDSHLVTCHKYPAEHHRCDSCPRAYAWRPLLVRHRAIVHGDLRNYPCENCPKSDKSQVFTDPSNLQRHIRTHHVGARSHACTECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKSYTQFSNLCRHKRMHADCRMQIKCGKCGQSFSTVTSLSKHKRFCDSTPSTGPPGTMPQLPTPAPSPFLVYPRPPVSLPGGLPFYPPSLMGPYPGIFPNAPNFLNTPLLFPPKVEEAEKRSDSPKKERFTPPRVLPQHSKVSPSTAEEATSSFRPSPARPPIQPTPESDDHPARKRKRSRSNEKKVDSEHVPSTTNEETTDQPLDLRVQTKRQRTNSNTAERKSRSPSPTPAPIEEDPPPPDPPKPEEETPLSMEMDSKDVPNSPQLRNSLSTEQPPTNTPPHMAYPRPIHPMFLEAMYRGPTSSFPGFPGGPPPPGSATPESRLLPPLPPFGPPRGLPFLGTLMNGLSGARPGGGGFDLLARPPLGPFPGVKPFQEAVIASHHHHHHHHAHGKMKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHDKQRPFKCPLCERCFGQQTNLDRHLKKHEADDGSGVVSVADSPGSSNENEREDTYFDEIRSFMGKVTYGGEAGYGLPPHPAYLPSRLHEMHESKLETEYDEDEDSEEGASPLDDADGLSPAETKESTPPPQYDLKLREKQELLNNNTAEPVIEIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01539779;
90% Identity: iTF_00118172;
80% Identity: -