Basic Information

Insect: Eufriesea mexicana
Gene Symbol: -
Assembly: GCA_001483705.1
Location: NW:249318-253584[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 2.5 1.4e+02 2.5 4.1 2 23 240 262 239 262 0.96

2 21 0.026 1.4 8.7 2.6 1 23 312 334 312 334 0.97

3 21 0.12 6.6 6.6 2.2 1 23 383 405 383 405 0.98

4 21 0.024 1.3 8.8 0.2 1 21 460 480 460 481 0.93

5 21 6.2 3.3e+02 1.2 2.5 1 10 493 502 493 516 0.73

6 21 0.0023 0.12 12.0 1.1 1 23 521 543 521 543 0.96

7 21 0.00057 0.031 13.9 0.1 1 23 590 612 590 612 0.97

8 21 0.00054 0.029 14.0 0.1 1 23 618 640 618 640 0.97

9 21 2.8e-06 0.00015 21.2 0.2 1 23 683 706 683 706 0.96

10 21 0.051 2.8 7.8 4.3 1 23 713 736 713 736 0.95

11 21 0.0011 0.058 13.1 1.0 2 23 745 767 744 767 0.94

12 21 0.00056 0.03 14.0 0.1 2 23 775 796 774 796 0.96

13 21 0.067 3.6 7.4 0.4 1 20 852 871 852 871 0.97

14 21 0.00019 0.01 15.5 0.1 1 23 890 912 890 912 0.98

15 21 0.00026 0.014 15.0 0.8 1 23 926 948 926 948 0.97

16 21 2.7e-05 0.0014 18.1 2.0 2 23 967 989 966 989 0.94

17 21 0.013 0.71 9.6 1.5 2 23 1041 1063 1040 1063 0.93

18 21 0.0083 0.45 10.3 1.5 2 23 1089 1111 1088 1111 0.92

19 21 0.0017 0.092 12.4 0.0 1 23 1118 1142 1118 1142 0.96

20 21 0.0095 0.51 10.1 2.9 1 23 1147 1170 1147 1170 0.97

21 21 0.036 1.9 8.3 1.0 2 23 1200 1222 1200 1222 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	2.5	1.4e+02	2.5	4.1	2	23	240	262	239	262	0.96
2	21	0.026	1.4	8.7	2.6	1	23	312	334	312	334	0.97
3	21	0.12	6.6	6.6	2.2	1	23	383	405	383	405	0.98
4	21	0.024	1.3	8.8	0.2	1	21	460	480	460	481	0.93
5	21	6.2	3.3e+02	1.2	2.5	1	10	493	502	493	516	0.73
6	21	0.0023	0.12	12.0	1.1	1	23	521	543	521	543	0.96
7	21	0.00057	0.031	13.9	0.1	1	23	590	612	590	612	0.97
8	21	0.00054	0.029	14.0	0.1	1	23	618	640	618	640	0.97
9	21	2.8e-06	0.00015	21.2	0.2	1	23	683	706	683	706	0.96
10	21	0.051	2.8	7.8	4.3	1	23	713	736	713	736	0.95
11	21	0.0011	0.058	13.1	1.0	2	23	745	767	744	767	0.94
12	21	0.00056	0.03	14.0	0.1	2	23	775	796	774	796	0.96
13	21	0.067	3.6	7.4	0.4	1	20	852	871	852	871	0.97
14	21	0.00019	0.01	15.5	0.1	1	23	890	912	890	912	0.98
15	21	0.00026	0.014	15.0	0.8	1	23	926	948	926	948	0.97
16	21	2.7e-05	0.0014	18.1	2.0	2	23	967	989	966	989	0.94
17	21	0.013	0.71	9.6	1.5	2	23	1041	1063	1040	1063	0.93
18	21	0.0083	0.45	10.3	1.5	2	23	1089	1111	1088	1111	0.92
19	21	0.0017	0.092	12.4	0.0	1	23	1118	1142	1118	1142	0.96
20	21	0.0095	0.51	10.1	2.9	1	23	1147	1170	1147	1170	0.97
21	21	0.036	1.9	8.3	1.0	2	23	1200	1222	1200	1222	0.94

Sequence Information

Coding Sequence: ATGGACGAGGTGGTGGAGTTGCAAAAGATGGATAACGTGTGTAGACTCTGCCTCTCCACCGACGAGCCAAAATCGTCGGTGTTTGGAACAGAAAATGCTTCGGTATCATTGGCCAGTAAGATACAAGCTTGCCTGTCGATTCAGATTTTAACCACGGACAGATTATCGACACAGATATGCGCGCAATGCGTGAAAAACATAAATCAGTGGTATGATTACAAGGAATCATGTTTGCGTTCTCAAGACAAATTACAACAATGGTTGCAACAGCATATGCAGTCAAGTCCAATGgTTGTAACTATTAAAGATGAACCTGTTGATTTGGACTTTTGTGAAGACAAGATTGAGGTCATTTCTGAATCTGCCACTGATTCAGACTTGGAAGCTACTAATCTTGAAGACAGTGCTGCGAATCATGTAGAAAATAATGTGCAAGAATTAACTGATGATGAAGTAGTTTTAGATAAAGGTGAACCATCTTTAACGAAGAACTTGGAGACACCTGTAAAACCTGAACCACGAGAGGACTATGATACGGACTGTActattgaaatagaatctgtTACTGGTAGTGAGCTTGTACTGAATCCTCTTTCAAACACAGAGGATAGAGTAATGGAAGCTGATTCTACCCAAAAGTCAGGTGTAACTAAGACAATTAGAAAAAGGGGCAAAAGAGGACGTGTGTATTTCAAAAGTATACGTCCTTTCAAACAGAAATGTGTATACTGTCAAATTTATTTGCATTCTAAGCATTCTTATGCAAATCACATGGAAAGATTTCACAGTAATAAACAGAATGGTAGTGCTGAAAATGTGGAACTACAAGGTGATGAAGAGCTTGTCGAAGATTTGGAAGAGGAATTAATGAGCATGGAAAAGGATGCTCCATTGACGCAAGTACAGCAAAATATTATCAGTCAGTTGAAAACATTCTCGTGTTACTCTTGTCAACAAAGTTTTAACGATCGCAGAAGCACACTTTCTCATATACGTCAACACATGCCTGATCTGAGGCCGTATACGTGTATCGCGTGTTTGACAGAGTTCCCAGATCGATCAATGTACAAGTCGCATTGCGGAGCATCGTTTGAGTGTGCAATGAAGATTGCACTAGTTATACCGAAGCAAGGCGAGGAAAGGTACTTCACGTGTAATATGTGTTTGCGTTCGATGCAGAATAGGAAGCAGTTGCTTACCCATCTATCGAGACACTCGGATAAACAATACGAGGAACTAATATCTCCATCACGATCTCCGCCTAAACTAAAACCAGTGACTCCTCTACCACCTGTTAAACAAGAAATAATAAGAAAGTCATTAGAAGGAGGCTTGAATATACCAGGTCCTTATAAAAATGGCGACCCTGCGCACAATCATGCATGCGACTTGTGTGGTATGATCTACAGGTACAGACCCAACATGTTAAGACATAGAAATTTGTGTCAACGTTTACCACTCGAGGTCAGAACATCCTACAGGTGTGTTCACTGTGGCATGACATATCTCGTATTTAAAAAGTTTCACTATCATATCACGGCCGATCACAAGAAACAAGAGTTTACATGTGCTGACTGTGGTAACAAATACAGATCTCCTAGCGATTACTTGGATCATCATGAACAACATCGTATGGCTCGTAGTAAAAAATATCCTGAGTCGAGGAGCGTTTCAATAAAGCCCATAAAGAATATTTCGACACCTTTCAAGGACTGGGATACGTTTGAAGCCGAAGTGAACGCAGACAAACTATCAGATAGTAATCAGTATAGTTGTGCTCTTTGCAATTTGGAATTTGCGACTAGAGCTGAACTGACGGAACATAGGAATCTTCATCTGAAAGTAAAGATCTACTCTTGTGTCATCTGTCGCAGCATGTTCAGCAGTGCGGGTGCTTTAGAGATTCATATGAAAGATCATGGTATAGAAGATCCGAACGAAAGGAACGCAAACATCTCATGCGTTGAGTACAGTACAGTGGAAGATGATTCACTAGATTCAAATTCACTAAATTTAAGTGCCGCTTCGGAGTCTGGTTCGAAGAAGTACGACTGTGGTGTATGcggtaaaatattttcaaatggcGCGAATCTTAAGAGGCATACAAGAAACGTCCACAGTATCGCTGCAGGTCCCTATAGTTGCCCTCAATGTTTAAGAATGTTCAAGAGCAAAGAAATGTGTAAGCACCACATTGTGACTGAACACACAAAGCCTGAGAAAACTATGCTTCGATGTCCTCGATGTCCAAAGACTTTTGTCTTCCAATTTAACCTAGATCTCCACTTCCAGTCTACTCATGCTGAAAAACCTGGTGGTCAGAAGTGCGACCTTTGTGGCAAAGAATTTGTAGAGGAAGCATCACTGAAGATACACAGGAGTTGGCATAAGCGAGCAAACTCTCGCTTGAGCTTGCGATTCTTGAAGAAAGAGGACGAAGTATCGTTGAATGTGCCGAAACAAGAAGTATCGTTCAATGCAAATATGGGCCGACCAGCCAGAGCACGAAAAACTTATCCGAGTTCGCCTCCCACAAAACCTGACAGTGGCAATTTCCAATGTCAGGTTTGCAGCGATAAGTTTAACGATGTAACAGAATTGAGAAAACACTTATGGGACATACATTGTGCTCGCAACAAAACCGAGAAAAACTTTGCGGATGATGAGTTTCAATGCGAGATTTGTACGAATGTTTTCCCTGACAGGGAGACATTGGATGTGCACATGCAATGGCACAATGCTCAACCCATCCTCTCCGACATCCAGAAGATCAATTTCCCTTGCGAAATTTGTGGGAAACTTTACAGTTCCAAAAAAGTATTATCAAGACACAAAAAGCTTCATAAAGCAACTACAGTGGCAGGCATGAAGTTCCAGGCAACTAACAGAAGACAGATGATGTGTACCTTCTGCAACAAAGTATTCACCAATAACCAGTCGCTTCAACGTCACAAACTCAGCATGCACGTCAACTTATTCCCTGAACGACCTCAAATGACCTACAATAATGCCAAAAGAATGTCGCAAGATGAACCTAAACCTAAGAAGATCAAATTAGAAGACGAAAATAAGAAAACACCATTCGCTATGGATGCTCTGACTGCAGGCAGAAAGTCTGTGATGTGCCATGTTTGTAGAAAGTTCTTCGCGAACATGAGCGTGTTGTACAAACACAAACAATTAGTACACAAAAATTACCCGAAAAGTGGTATAAAGGTATTAGCGCTCGAGTGTATACCAGTGCCTAGCAACGATGGTAAAGTCAGCTGTAACGTTTGTCACAGGAAGTTCTCCGGTGTGCCGAATCTTCGGCAACATTTCACTGTAAAACACAAACTTGCACCTCCAAAGTACGCTTGCCCCATAGACGGTTGCCAGCTCACGTTCCCCTCGCCGGTAACGCTAAAAAATCACGAATTGTCGCACACGAGCACGATTTTCAGTTGTAATCTGTGCGACAGACACGTGTTCAGCAAGCAAACCATGTCGAAGCATATGCTAACAGTGCACAACACCGTCTACGACGCTGACCATAGCCAGAACTTTCACAGAGAGATGGATTTGTCCACGTACACGGTGGAGGGTGCGGTAGACGCGACTTGTCCTCAATGCAAGATCAAGTATCCAAACAACAAGGCCATGAAGATTCACTATTTTAAGTTCCACGAAGGCGCGGATCAGTAG
Protein Sequence: MDEVVELQKMDNVCRLCLSTDEPKSSVFGTENASVSLASKIQACLSIQILTTDRLSTQICAQCVKNINQWYDYKESCLRSQDKLQQWLQQHMQSSPMVVTIKDEPVDLDFCEDKIEVISESATDSDLEATNLEDSAANHVENNVQELTDDEVVLDKGEPSLTKNLETPVKPEPREDYDTDCTIEIESVTGSELVLNPLSNTEDRVMEADSTQKSGVTKTIRKRGKRGRVYFKSIRPFKQKCVYCQIYLHSKHSYANHMERFHSNKQNGSAENVELQGDEELVEDLEEELMSMEKDAPLTQVQQNIISQLKTFSCYSCQQSFNDRRSTLSHIRQHMPDLRPYTCIACLTEFPDRSMYKSHCGASFECAMKIALVIPKQGEERYFTCNMCLRSMQNRKQLLTHLSRHSDKQYEELISPSRSPPKLKPVTPLPPVKQEIIRKSLEGGLNIPGPYKNGDPAHNHACDLCGMIYRYRPNMLRHRNLCQRLPLEVRTSYRCVHCGMTYLVFKKFHYHITADHKKQEFTCADCGNKYRSPSDYLDHHEQHRMARSKKYPESRSVSIKPIKNISTPFKDWDTFEAEVNADKLSDSNQYSCALCNLEFATRAELTEHRNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIEDPNERNANISCVEYSTVEDDSLDSNSLNLSAASESGSKKYDCGVCGKIFSNGANLKRHTRNVHSIAAGPYSCPQCLRMFKSKEMCKHHIVTEHTKPEKTMLRCPRCPKTFVFQFNLDLHFQSTHAEKPGGQKCDLCGKEFVEEASLKIHRSWHKRANSRLSLRFLKKEDEVSLNVPKQEVSFNANMGRPARARKTYPSSPPTKPDSGNFQCQVCSDKFNDVTELRKHLWDIHCARNKTEKNFADDEFQCEICTNVFPDRETLDVHMQWHNAQPILSDIQKINFPCEICGKLYSSKKVLSRHKKLHKATTVAGMKFQATNRRQMMCTFCNKVFTNNQSLQRHKLSMHVNLFPERPQMTYNNAKRMSQDEPKPKKIKLEDENKKTPFAMDALTAGRKSVMCHVCRKFFANMSVLYKHKQLVHKNYPKSGIKVLALECIPVPSNDGKVSCNVCHRKFSGVPNLRQHFTVKHKLAPPKYACPIDGCQLTFPSPVTLKNHELSHTSTIFSCNLCDRHVFSKQTMSKHMLTVHNTVYDADHSQNFHREMDLSTYTVEGAVDATCPQCKIKYPNNKAMKIHYFKFHEGADQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00684900;
90% Identity: -
80% Identity: -