Basic Information

Insect: Eufriesea mexicana
Gene Symbol: lolal
Assembly: GCA_001483705.1
Location: NW:369522-386886[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.2e-07 6.4e-06 25.5 2.0 1 23 621 643 621 643 0.98

2 8 1.3e-05 0.00068 19.1 3.0 1 23 649 671 649 671 0.98

3 8 1.4e-06 7.7e-05 22.1 0.3 2 23 680 701 680 701 0.98

4 8 4.7e-05 0.0025 17.3 0.1 3 23 709 729 707 729 0.97

5 8 1.5e-07 8e-06 25.2 3.0 1 23 735 757 735 757 0.98

6 8 2.5e-06 0.00014 21.3 0.7 1 23 763 785 763 785 0.98

7 8 5.4e-05 0.0029 17.2 7.5 1 23 791 813 791 813 0.98

8 8 1.8e-05 0.00096 18.7 1.1 1 21 819 839 819 840 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.2e-07	6.4e-06	25.5	2.0	1	23	621	643	621	643	0.98
2	8	1.3e-05	0.00068	19.1	3.0	1	23	649	671	649	671	0.98
3	8	1.4e-06	7.7e-05	22.1	0.3	2	23	680	701	680	701	0.98
4	8	4.7e-05	0.0025	17.3	0.1	3	23	709	729	707	729	0.97
5	8	1.5e-07	8e-06	25.2	3.0	1	23	735	757	735	757	0.98
6	8	2.5e-06	0.00014	21.3	0.7	1	23	763	785	763	785	0.98
7	8	5.4e-05	0.0029	17.2	7.5	1	23	791	813	791	813	0.98
8	8	1.8e-05	0.00096	18.7	1.1	1	21	819	839	819	840	0.94

Sequence Information

Coding Sequence: ATGATGGGAGAAGTGATCCGGGTTTCTGGGAGGGCACCGGATGTCGGAGAGTTCCTCAAGGAGGCGATGCTGTCCCAAAGGTTCGCAGACGTGGCTCTCTGTTGTCCTGATGGGCAACGATTCCTGGCACATCGTTTGGTTCTCTCAGCTGCCAGCCCTTACTTACAGGAAGTGTTACTGGCTCACAGCAGAACGTCAACGCATTGCGAGCCCATCACAGTGATCCTGGCCGAGGTGGAGGCACCAGAATTGGCAGCGATCCTCGGTTTCGTGTACACAGGAAGCGCCACGGTGCCTCGTCCTCGTCTAAATGCGTTTCTGCACGCGGCCGAGGCCCTCCACATCAGACTTCCGCCGGTGCCGGTCGTGATGACTTGCACGCAGGCTGACTGCAAGCAGGAAGACATCAAGGACGTGAAGATCAGCCCGAAGTACCTTCAGTGCGATCAGTATCCGTGCTGCGACCGCTGGTACCGTTCACGTAGGAATCAAGATGGAGATTCCGCGGGTAAAGAGGAACCCTATCCGGCGATCGAGTCCTTGGAAACCGCAAGAGAAATCAGACCGCTTCCTGAATCGATGAACTTTGCCGGATCGCGATACGGGCCAAGTAGATATTGCTCTACAACCTGGCCCGTTCCTCCTTTCGCGAACGCCGCTCAAGAAAAGACTGTTCACGATGTAGATCAACGTTTGGATAAGGACAGGATGAGTCAGACAGACGTCAGAAGGTATCATCCGATCTCTGTGGTGCCGAGGATCGATAGGATTAGCGATGTTACGAGTGGACACTAGCAGGAATTCTGCTTCTCTAGGAGCTCGTACGATCTTCGCAGTAAACCGCTGGATCCACTTGACGCGAGGATGAAAGGTGATCACGGTCGTTTCCAAGCCACGAACGAAGAAGATGTTTTGGGGAAGGATTTATCCACGTATGGTAGTTGTTTCGAGCACGAGAGGACTCCTGCGGATCGTCTTAGTGTAATTCGTTCTCGAATCGGAACGTGTCAGGGCAAAACTGTGGCCCTGCCGTTGCCTGATCGTACGAGATCGTACGAAAAATCGGATTTCGGTGAAGATCTGACTTGTCGTGAAAGCTGTTTCGTTTGGAAGTCGCCAAAGAGACACGTGGCTAATAGAGTCATAGCTTCACCGTGGAAACAGACCGTCAGGCCTTATCATTTGCCCAAGTTGCAGCCAATGGTGTTTCAGCCCCACGTCGATGACGTTAAAACCAGGGAGAATCTACGTGTACCGGAAGTCACGCGACCACCAGCGATTTCCACCAGTCCTAATCGCCAATTCTCCAAAAATTCTGCGCCTGCGGATCACTACTATGGTGTCGAAGTTCCTATCACTCACGATGTTGCATACAGTAACGGTAGCAAATTATTGGAAGCGAATTCTACCTTGGGACCGAGGCCTCAGGAATTTTATCCGCCTCAAATTCCATCGTCAACCATCACGCAGATCACCCCTGCGGTTAATAGCGATGTCAGGAACAGCGAGACGATGCTACAGTCTCAGAATAATGTAATTTCTACCACAACCAGATCTCTGTCGAGTGCCACGGAGGGTAGTCAGATGAATATCAACAGGAAGGGTAGTTATTTCGGACAAACGCTACCTCAGTCGCCGCAGAGGCCGGAAATCTCCCATCCTGTTAGCAGATTGTGCGATACGATCGAGTCGACTGGTAAAACCGATCGTTTCGCGAATGTGGAAGCCGAGAAGCCCGAGAAAGAAACGAGGATCGACGATAAGTTCGCTGAAAGAGTCATTATCAACAGTGATAACAACAATAACGATGCTATAGTTAGTCAGGATGCTGTTCAACGCGGCAAAGGAGCACAGGAGAATCATAGGTGCGATCAGTGTGGCAAGACTTTCGTTACCAAAGCCTCCCTAAAGGTGCACGTCAGAACGCACTCGGGGGAGAAGCCATTCCGTTGCACCGATTGTGGCAAGCAATTCTCCCAGTTACGAAATTACAAGTACCACCGAAGCGTCCACGAGGGTACCAGAGAATTCGCAGCCACCTGTCCAGAATGCGGCAAATACTTCAACGACCGCGGCTACCTGAGTTCCCATATGAAGATCCATCGCAACAGGAAGGAGTACGGCTGCGCGGAATGCGGCAAAAGCTTTAATCAGCGGGTCGCCTACAACATGCACGTCAGAATTCATACAGGAGTGAAACCACATCAGTGTGAACAGTGCGGGAAagcattttccaggaagatgTTGTTGAAGCAACATCTCAGAACTCATTCCGGGGAAAGACCCTATCAGTGCCAGGTCTGTCAGAAAGCGTTCGCTGATCGATCGAACATGACGTTACACACGAGATTACATTCCGGATTAAAGCCTTATCAATGTACACTGTGTTCCAAGGCGTTCACGAAGAAACATCATCTAAAGACTCACCTTAATTATCACACGGGGACCAAGCCTTATTCCTGTCCGAACTGTGGACTGAGATTTTCACAGAGTAGCAATATGCGGACCCATTTCAAGAAATGTACAATTAGTAATCCGCCGGAAGCGAAGAGTTCCCGATTAGAAGGTACTGTGATAGATTCCTCCAAGACTGTACAGGCCAGAGTAATCTCTAGGACACCCACGGACACGTTGACACCGCCAAATTCTGATCAGGAATTGAGCATTCTAACCCCTATATCTAAAAGTAACGGAGTGGAAGGAAGTGCAACGTAG
Protein Sequence: MMGEVIRVSGRAPDVGEFLKEAMLSQRFADVALCCPDGQRFLAHRLVLSAASPYLQEVLLAHSRTSTHCEPITVILAEVEAPELAAILGFVYTGSATVPRPRLNAFLHAAEALHIRLPPVPVVMTCTQADCKQEDIKDVKISPKYLQCDQYPCCDRWYRSRRNQDGDSAGKEEPYPAIESLETAREIRPLPESMNFAGSRYGPSRYCSTTWPVPPFANAAQEKTVHDVDQRLDKDRMSQTDVRRYHPISVVPRIDRISDVTSGH*QEFCFSRSSYDLRSKPLDPLDARMKGDHGRFQATNEEDVLGKDLSTYGSCFEHERTPADRLSVIRSRIGTCQGKTVALPLPDRTRSYEKSDFGEDLTCRESCFVWKSPKRHVANRVIASPWKQTVRPYHLPKLQPMVFQPHVDDVKTRENLRVPEVTRPPAISTSPNRQFSKNSAPADHYYGVEVPITHDVAYSNGSKLLEANSTLGPRPQEFYPPQIPSSTITQITPAVNSDVRNSETMLQSQNNVISTTTRSLSSATEGSQMNINRKGSYFGQTLPQSPQRPEISHPVSRLCDTIESTGKTDRFANVEAEKPEKETRIDDKFAERVIINSDNNNNDAIVSQDAVQRGKGAQENHRCDQCGKTFVTKASLKVHVRTHSGEKPFRCTDCGKQFSQLRNYKYHRSVHEGTREFAATCPECGKYFNDRGYLSSHMKIHRNRKEYGCAECGKSFNQRVAYNMHVRIHTGVKPHQCEQCGKAFSRKMLLKQHLRTHSGERPYQCQVCQKAFADRSNMTLHTRLHSGLKPYQCTLCSKAFTKKHHLKTHLNYHTGTKPYSCPNCGLRFSQSSNMRTHFKKCTISNPPEAKSSRLEGTVIDSSKTVQARVISRTPTDTLTPPNSDQELSILTPISKSNGVEGSAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00230793;
90% Identity: iTF_00684272;
80% Identity: iTF_00684272;