Basic Information

Insect: Eufriesea mexicana
Gene Symbol: -
Assembly: GCA_001483705.1
Location: NW:240263-245657[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.14 7.7 6.4 2.3 1 23 432 454 432 454 0.94

2 18 0.00069 0.037 13.7 0.9 2 23 489 510 488 510 0.98

3 18 0.0015 0.079 12.6 1.1 1 23 663 685 663 685 0.96

4 18 0.0024 0.13 12.0 0.5 2 23 689 710 688 710 0.96

5 18 0.076 4.1 7.2 6.1 1 23 783 806 783 806 0.93

6 18 0.00038 0.021 14.5 0.7 1 21 812 832 812 836 0.92

7 18 0.0012 0.066 12.9 3.4 2 23 915 936 914 936 0.95

8 18 0.0002 0.011 15.4 4.2 1 23 993 1015 993 1015 0.96

9 18 0.00026 0.014 15.0 0.7 1 20 1020 1039 1020 1041 0.94

10 18 0.038 2.1 8.2 0.5 2 23 1052 1073 1052 1073 0.97

11 18 2.6e-05 0.0014 18.2 0.6 2 23 1112 1133 1111 1133 0.97

12 18 2.4e-05 0.0013 18.3 1.6 1 23 1138 1160 1138 1160 0.95

13 18 0.00013 0.0071 15.9 2.9 1 23 1166 1188 1166 1188 0.98

14 18 4.2e-06 0.00023 20.6 0.4 1 23 1204 1226 1204 1226 0.95

15 18 3.4e-07 1.8e-05 24.1 0.6 1 23 1232 1254 1232 1254 0.99

16 18 3.7e-05 0.002 17.7 0.2 1 23 1260 1282 1260 1282 0.97

17 18 0.00014 0.0074 15.9 4.1 1 23 1288 1310 1288 1310 0.96

18 18 0.0097 0.52 10.1 0.4 1 20 1316 1335 1316 1337 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.14	7.7	6.4	2.3	1	23	432	454	432	454	0.94
2	18	0.00069	0.037	13.7	0.9	2	23	489	510	488	510	0.98
3	18	0.0015	0.079	12.6	1.1	1	23	663	685	663	685	0.96
4	18	0.0024	0.13	12.0	0.5	2	23	689	710	688	710	0.96
5	18	0.076	4.1	7.2	6.1	1	23	783	806	783	806	0.93
6	18	0.00038	0.021	14.5	0.7	1	21	812	832	812	836	0.92
7	18	0.0012	0.066	12.9	3.4	2	23	915	936	914	936	0.95
8	18	0.0002	0.011	15.4	4.2	1	23	993	1015	993	1015	0.96
9	18	0.00026	0.014	15.0	0.7	1	20	1020	1039	1020	1041	0.94
10	18	0.038	2.1	8.2	0.5	2	23	1052	1073	1052	1073	0.97
11	18	2.6e-05	0.0014	18.2	0.6	2	23	1112	1133	1111	1133	0.97
12	18	2.4e-05	0.0013	18.3	1.6	1	23	1138	1160	1138	1160	0.95
13	18	0.00013	0.0071	15.9	2.9	1	23	1166	1188	1166	1188	0.98
14	18	4.2e-06	0.00023	20.6	0.4	1	23	1204	1226	1204	1226	0.95
15	18	3.4e-07	1.8e-05	24.1	0.6	1	23	1232	1254	1232	1254	0.99
16	18	3.7e-05	0.002	17.7	0.2	1	23	1260	1282	1260	1282	0.97
17	18	0.00014	0.0074	15.9	4.1	1	23	1288	1310	1288	1310	0.96
18	18	0.0097	0.52	10.1	0.4	1	20	1316	1335	1316	1337	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTGGAAATAAATACGTCCGATTCGTCACAAAACGAAGAGGGCATTGTGTCGACGGAAGAAATATGTCGTGTTTGTCTTCTTGGCAATTTGGTGATGCGGGAATTGTTTTTGGAGAGTGAGGTTGCGTCCCTTTCAGCAAAGGCAATGAGTTTCGCTAATGTTAAGATGTTACCTGGCGATGGCTTACCGACGCGTGTATGCTGTTTATGTGCTGACAAACTTGAATCCGCGTACGATTTTAAACTACAAGTGGAACAAGCTGACACAGTTCTCAGGGAAAGATTTGTTACTATGAATATAAAAGAAGAGTTGTTCTTTAATGAAGTTGAGGTACATCTAGAGTCAGGAGAGCAAAACGAGAATATGGATGAGATGCACATAGGGAATGATTATCAAAATACCGCTGAAACGCTTGCGACGATGTCTCGGGAAGAGAAATCATCGCTTTTGAAGGATCAATTGACTTTattacaagtggaaaaattagcTGATGAAGAACAGGCTATGAGAGAACAGAATCCTAGCGCGATAATGGAGGAAGTAATAGATCAAACTATTACGACGGACCAAACAGCAGAAGAGTGCCTAAATCatgaagaagaagatgaagaagaagaagaggaagaggaagaggaagaagaagaagaagaagaggaagaggaaggagaagaggaggaggaggaggaagaagaagaagaagaagaagaagaagaagaagaagaggaagaagaagaagcagaagaagaggaagaagaagacgtTAAAGTCATCAAgaacgaaaaattattaaaacacgAAAACCGGGATCACGATTGTCTTGAAAATATCTCAACAGTGGAACATGATTATATATTACAACAGGAATGCGTATTATCTAACGCAAATGAGCAACAACAGCATCATcagcatcatcatcatcatcatcatcatcatcatcatcatcaccaacaacaacaacaacaacaacaacaacaacaactaaCCTCTGAAGAATCATTCCAGCGCGAGGATTGCGCAGAATATGTAGATCTGTTAGTAAAGGCGGCCGACGCGACAAAGCGTGAAGGACAAGATGAAGGAGAAAAATCGGATATTACAAATACGGATGTTAAAGCCGAGTTAGAATCTCAATTTCATGGTGAAACTAGAAGGAGTAAACGTAAATTAGTTCGACGAAACGTTGAAATGAAACGAGATTCTGACGAGGAAAATTATTTtgagaatttaaatttaagctCGAGATTAAAGAAAGGTCAGCCTTCTGATCAAGCGGAGAAATTTTTTTTTCTATGTTACTTGTGCGATAAGGAATTTTTGTCGAAAAACGTTTTAAAAGAACATATGCATTCTCACGAGGAAGTACGAAAAGCATTGTCTCTCAAAAAGACACCGGACACGCCGCAGAAGAACATCTACAATCTTGCTAAGTCGCCCCCATCGGGTAAAAGATCAAACAAGTGCCCATATTGTGgcaaacaatatatatatataatctcaTTTAGTAAACATTTGAAGAAACATGAGAGGGAGAAAGAAGAGGGAAAGGATGAACCGATGCCTTTAGAAATATCATTCCACGAAGATGAACACAGTTTAGATCTAGATGATTATGAAGACGAACGGCGACATTTGGATATAGAGTATCGGAAAAAAGCCAAACAAAAAAGGGAAAACGTTACTAGaacaaaaatggaaataaaggACGGGATGGAAGATCAAGAGGAACAGGAAGAACATAGAGAGGAAGAAAcgggaaacgaaacgaaaagaaTCAATGGACGTGGGGTCGGgaacaataataacaacaacaatgaTGACGACGATGATGATGACAATGGCGAGGACGACGATGACAATGACAATGACGATGATGACAATAATGATATTGATGTCAACTATGACGATGTCAGACAAGTAGTAggtaataattcaaataaagaACGGGAACAGGAGAATTGTAGTATTCGTACAGAAACGTTCGCATGTGATAGATGCACGGAGAAATTTTACACAAAACGCGGCTTGCGAAAACATGCGATTTCACATGCTGCTCTGAGGTGTAGCATATGCGAAGAAGAATTCAATTCGTTGATAAAGTTAAGAAATCACCGTGCGAAACACGTTGTCGAAGGGGTATTAACCGAGCAAGAACTTGAAATGGATACAGAATGTCCGACTAACAAAGAAACAGCTAGTTACCAGACAATGGATaaagaaaacgaagaaaggAATCATGAGATGGATAATGAATCTGTAGCAGGATTGTTGGAGATCGAAAATAACGCATCAAAGAAAAACGACAGAAACATAGAAACGCATCGTCATTCGGGGATGGACCATAGTTGCAAGGTGTGTTGCCAACGATTTACAACGAAGGATCTTTTGCAAAAACACACGGAACAACAACACGAACGTGTGAAAACCTACAAGTGTACACAATGTAACAAAACATTCGGTAATGAACTTACTTTACGTAATCATCTCATAGCTACTAATCATAAAACTTTTCTTCATGGGCAAGAGTATGATCCTAATAAACGTATTAAAAGAGTCGCTGCGAAAGCCGCACAAAAGATTATCGACAAGATTAAAACCGAGGATGGTTTAGAAGATTACGACGAAGAAGAGGAGAATAATGGCAGGATTAATCGCGCTAATTCTACAGATAATAATTATAGCCGGAATAAGCGAGACATTTCCTCGCAGAAGAAACATAATTATAGAAAAGAACTTGAATGCGCAAGCTGCAATAAAAAATGCAGTTCAAAGCAATCATTAACGAAACATATGGAGCAACATGTAAAAGATGAACAACAACGAATGCTAAAGTCGGAGAAGCAAAAGCAATTGGCAGAGAAGAAAGAACGGCAAAAGGAGTGTATCAACGAAGAGATGGACAACGGGGAGCACAGAGATGATGATTACGATTCGGATTTCGAGAGTGGTTTGGATTGGCCAATGGACAATCATGAGTGCGCAAAATGCAAAAAacggtatagcacgaaaaagTCATTGTTACGTCATCAATTGTTGCACGAGGAACCAAACTTCGAGTGTGATATTTGCAACGTTAAATTTTACCGTAAAGACAAACTGAAAGCTCATTATGATAAGTGCTCGGAAAAGAATCCTGATCAAGTGAGAAAGTGTAATATTTGTGGAGATAGTTTTGAAAACAACGAAATTCTACGTGAGCATAGATCGAAACATGTTACCGAGGGTATTCTTACAGAGGAAGATTTGAGAGATATTGAACCGCGACCTGAGGAGAAAAAGCCTGGTGAAAAAATTGGCCGAAAGAGAAGAACTGATATCGTAGGCTTAGAATGTACGGAATGTAACAAGCAGTATACATCGAGAAAGGGGCTTTTACGACATATTCAAGTTCATGAAGGGAAAAAGTATCTATGTGACATATGTCCGAAAAAATTTTATCGAAGAGAACATTTGAAGATACACGTGGCCAAACATAATATGATCAAACCGTACAAATGTACACGGTGCACAAAACGTTTTATTAAAGAAGAACAACTAACAAATCATTTATCAAAGCACGATCGAACATTCAAAAAGAACAAAGAAACGGATAGCTCGAAAAGATTCCTTTGCGAAATTTGTTCGAAGAGTTTTACACAATCAACGACATTGATCGCACATCTTAGAGCGCATAATGGTATAAAACCATATGTCTGCGAGGTCTGTTCTCGACCGTTCACAACGAATGCATATTTGAAAATGCACATGCGAACACATACGCAGGAACGGCCATATATTTGTCAATACTGTTCACGAGCATTTGCTAGAGCTGATACACTTGCCAATCATTTGACCTCGCACACAGGCGAAGCCAAGTATCATTGTAAGTACTGTCCGAAGAATTTCCGCCGCCTAAAATCTCTTAAAGAGCATGTTTTCATACATACCGGTCAAAGACCTTACGCCTGTCCAACCTGCGACCGACGATTCAACAACAACGGAAGTCGATACGCTCATAGTAAGAGGTGCAAACAAAATTTTGTACAAAATCAGAACCGTGCGCAAACATTAACTGCACAAGTGCAACCGGTTCAAAATCAGCAAAGAGTATTACAACAGGCCACTCTTGGACAAGGCCAAGTAGTAAAAACACAGAATATTaaaactattactattactagaCAACCAGAGCCAGTTACCACTCAACAAACGGTAATGCAACATCAAGAGATATTAATGCCTTTGATCCTTCCTCTCACGGTTACTCTTACCGATGTCGGTGAGGAAGTAATATTACCAGAAGGAACCAAAATCTTTACTACGTCATAA
Protein Sequence: MDAVEINTSDSSQNEEGIVSTEEICRVCLLGNLVMRELFLESEVASLSAKAMSFANVKMLPGDGLPTRVCCLCADKLESAYDFKLQVEQADTVLRERFVTMNIKEELFFNEVEVHLESGEQNENMDEMHIGNDYQNTAETLATMSREEKSSLLKDQLTLLQVEKLADEEQAMREQNPSAIMEEVIDQTITTDQTAEECLNHEEEDEEEEEEEEEEEEEEEEEEEGEEEEEEEEEEEEEEEEEEEEEEEAEEEEEEDVKVIKNEKLLKHENRDHDCLENISTVEHDYILQQECVLSNANEQQQHHQHHHHHHHHHHHHHQQQQQQQQQQQLTSEESFQREDCAEYVDLLVKAADATKREGQDEGEKSDITNTDVKAELESQFHGETRRSKRKLVRRNVEMKRDSDEENYFENLNLSSRLKKGQPSDQAEKFFFLCYLCDKEFLSKNVLKEHMHSHEEVRKALSLKKTPDTPQKNIYNLAKSPPSGKRSNKCPYCGKQYIYIISFSKHLKKHEREKEEGKDEPMPLEISFHEDEHSLDLDDYEDERRHLDIEYRKKAKQKRENVTRTKMEIKDGMEDQEEQEEHREEETGNETKRINGRGVGNNNNNNNDDDDDDDNGEDDDDNDNDDDDNNDIDVNYDDVRQVVGNNSNKEREQENCSIRTETFACDRCTEKFYTKRGLRKHAISHAALRCSICEEEFNSLIKLRNHRAKHVVEGVLTEQELEMDTECPTNKETASYQTMDKENEERNHEMDNESVAGLLEIENNASKKNDRNIETHRHSGMDHSCKVCCQRFTTKDLLQKHTEQQHERVKTYKCTQCNKTFGNELTLRNHLIATNHKTFLHGQEYDPNKRIKRVAAKAAQKIIDKIKTEDGLEDYDEEEENNGRINRANSTDNNYSRNKRDISSQKKHNYRKELECASCNKKCSSKQSLTKHMEQHVKDEQQRMLKSEKQKQLAEKKERQKECINEEMDNGEHRDDDYDSDFESGLDWPMDNHECAKCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRSKHVTEGILTEEDLRDIEPRPEEKKPGEKIGRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEEQLTNHLSKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNFVQNQNRAQTLTAQVQPVQNQQRVLQQATLGQGQVVKTQNIKTITITRQPEPVTTQQTVMQHQEILMPLILPLTVTLTDVGEEVILPEGTKIFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00684920;
90% Identity: iTF_00684920;
80% Identity: -