Basic Information

Insect: Eufriesea mexicana
Gene Symbol: -
Assembly: GCA_001483705.1
Location: NW:968408-987536[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 8.3e-05 0.0045 16.6 1.1 2 23 365 386 364 386 0.95

2 29 0.0016 0.086 12.5 0.4 1 23 392 414 392 414 0.97

3 29 0.00012 0.0062 16.1 0.1 1 23 418 440 418 440 0.98

4 29 0.0013 0.07 12.8 0.3 1 23 446 468 446 468 0.97

5 29 0.00018 0.0096 15.5 5.4 1 23 479 501 479 501 0.97

6 29 1.4e-06 7.4e-05 22.2 0.2 1 23 510 532 510 532 0.98

7 29 7.2e-06 0.00039 19.9 1.1 1 23 538 560 538 560 0.98

8 29 5.9e-05 0.0032 17.0 5.3 1 23 566 588 566 588 0.98

9 29 0.0012 0.064 12.9 5.9 1 23 594 616 594 616 0.97

10 29 0.082 4.4 7.1 2.3 1 23 728 750 728 750 0.97

11 29 4.2e-06 0.00022 20.7 0.7 2 23 760 782 760 782 0.96

12 29 0.00023 0.012 15.2 4.9 1 23 788 810 788 810 0.98

13 29 0.057 3.1 7.6 0.4 1 23 814 836 814 836 0.97

14 29 7.2e-06 0.00039 19.9 1.5 3 23 844 864 842 864 0.97

15 29 2.1e-05 0.0011 18.5 0.2 1 23 870 892 870 892 0.98

16 29 0.13 6.9 6.5 0.9 1 23 898 920 898 920 0.97

17 29 6.2e-07 3.3e-05 23.3 0.1 2 23 927 948 926 948 0.97

18 29 1.1e-06 5.9e-05 22.5 0.6 1 23 954 976 954 976 0.98

19 29 2e-07 1.1e-05 24.8 1.9 1 23 982 1004 982 1004 0.99

20 29 0.0013 0.07 12.8 0.9 1 23 1066 1088 1066 1088 0.97

21 29 6.7e-06 0.00036 20.0 0.7 1 23 1094 1116 1094 1116 0.99

22 29 2.8e-06 0.00015 21.2 1.0 1 23 1122 1144 1122 1144 0.98

23 29 0.001 0.054 13.2 1.0 2 23 1151 1173 1151 1173 0.96

24 29 0.00012 0.0065 16.1 6.1 1 23 1178 1200 1178 1200 0.97

25 29 0.0028 0.15 11.8 3.0 1 23 1209 1231 1209 1231 0.96

26 29 2.2e-05 0.0012 18.4 2.3 1 23 1237 1259 1237 1259 0.96

27 29 2.2e-06 0.00012 21.5 0.4 2 23 1266 1287 1265 1287 0.96

28 29 3.5e-06 0.00019 20.9 3.5 1 23 1293 1315 1293 1315 0.98

29 29 1.9e-06 0.0001 21.8 1.3 1 23 1321 1343 1321 1343 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	8.3e-05	0.0045	16.6	1.1	2	23	365	386	364	386	0.95
2	29	0.0016	0.086	12.5	0.4	1	23	392	414	392	414	0.97
3	29	0.00012	0.0062	16.1	0.1	1	23	418	440	418	440	0.98
4	29	0.0013	0.07	12.8	0.3	1	23	446	468	446	468	0.97
5	29	0.00018	0.0096	15.5	5.4	1	23	479	501	479	501	0.97
6	29	1.4e-06	7.4e-05	22.2	0.2	1	23	510	532	510	532	0.98
7	29	7.2e-06	0.00039	19.9	1.1	1	23	538	560	538	560	0.98
8	29	5.9e-05	0.0032	17.0	5.3	1	23	566	588	566	588	0.98
9	29	0.0012	0.064	12.9	5.9	1	23	594	616	594	616	0.97
10	29	0.082	4.4	7.1	2.3	1	23	728	750	728	750	0.97
11	29	4.2e-06	0.00022	20.7	0.7	2	23	760	782	760	782	0.96
12	29	0.00023	0.012	15.2	4.9	1	23	788	810	788	810	0.98
13	29	0.057	3.1	7.6	0.4	1	23	814	836	814	836	0.97
14	29	7.2e-06	0.00039	19.9	1.5	3	23	844	864	842	864	0.97
15	29	2.1e-05	0.0011	18.5	0.2	1	23	870	892	870	892	0.98
16	29	0.13	6.9	6.5	0.9	1	23	898	920	898	920	0.97
17	29	6.2e-07	3.3e-05	23.3	0.1	2	23	927	948	926	948	0.97
18	29	1.1e-06	5.9e-05	22.5	0.6	1	23	954	976	954	976	0.98
19	29	2e-07	1.1e-05	24.8	1.9	1	23	982	1004	982	1004	0.99
20	29	0.0013	0.07	12.8	0.9	1	23	1066	1088	1066	1088	0.97
21	29	6.7e-06	0.00036	20.0	0.7	1	23	1094	1116	1094	1116	0.99
22	29	2.8e-06	0.00015	21.2	1.0	1	23	1122	1144	1122	1144	0.98
23	29	0.001	0.054	13.2	1.0	2	23	1151	1173	1151	1173	0.96
24	29	0.00012	0.0065	16.1	6.1	1	23	1178	1200	1178	1200	0.97
25	29	0.0028	0.15	11.8	3.0	1	23	1209	1231	1209	1231	0.96
26	29	2.2e-05	0.0012	18.4	2.3	1	23	1237	1259	1237	1259	0.96
27	29	2.2e-06	0.00012	21.5	0.4	2	23	1266	1287	1265	1287	0.96
28	29	3.5e-06	0.00019	20.9	3.5	1	23	1293	1315	1293	1315	0.98
29	29	1.9e-06	0.0001	21.8	1.3	1	23	1321	1343	1321	1343	0.98

Sequence Information

Coding Sequence: ATGTCCTCCCTCGATTATCTGGACCTGTGTCGATTATGTCTTGTGAAGGACCGTGTTTCGGTGCCAATTTTCGAGGGTGAGGGAGACGTACGGCAGATATTTCTCAAGATCGCCGCCTGCCTACCGGTCAAGGTTACAAGAGAAGATAAGTTACCCAAAAAAATATGCGACGATTGTGTGTataaagtagaattattttatcaattttggAATACAACTGTAAACGCGGAGAAACAACTTCTACAATGGCTAGGAGAAGTCAGTTTAGAAGACAAACAGGGATATGTTACCAATGTTCTCAATCcgAGTGTAATGAAACAAGAACAGAATACAGAGAACAGGTTAGATGGCAATGTGATGCAGCAAGTAGGAGAACATCAGAACAATATGGGGATGGGTATGATGGACAACATGGGTTTGGGTATTCCCATGATAATATCCAGTGCTAATCAACAACAAATCACCTCAGTTCCTATGGACACAAGCGGTAATTCTGTACAAACCGTTCAGGCAGTGCCTGGTCCAAGTTCACAAACGACACATAACCAAATACCGCAAAATCAAACAAGTTCTACGcaacaagaagaagaagaggaaagtAGCGAAGATGAAGAAAACTCTGATGAAGAGTGTGATGGAGATGAAGGCCTACCTGTAAAAGAAGAAAGCGAAGAAGATCCCAGCAATAGAACTATAGAGCCTACAACTTTTGTAAATGTTTCCCTGGCATGCGATGAAGCAGGTCCTTCAGGATTACAACAACAGAAAATCTCAGATATACCTGAGATGCCAATGCCACAGCCAGCTGATGGGGATCCCAAATCTGGATATTTTGTGTCAAAGCTTGAGATGCTACCTCAGGATCAGCAAGACTGCGGCCCGAATGATGAGATATTCGATCAGGAAGATACAGAGCAGCTGCTGATCACGAATCGGTTGCACGTACCGAAGATGGAAAACGCAGACATAATCATCTCCGATGGTATCGTGCAGTGCAACCTCTCCGGAGATGGTTTCGTTTCCGATCACGCTCTCGCTCTGCACTTAAAAATGCACGAACAGGACGAGGTACAATTACAAGACGACCAGCTTGTCTGTGAGCACTGTGGCTGCAGTTTCGCTACGGTATCCGCGTTGAAGGATCACCAATTAGAGCACGAGGCGAACGAAAGTTACGCTTGCGAGACGTGTGGCTATATTACCGATCATCGGGAGAGCCTGATAGCTCATGAGAAGCGGCACAATATCAAGTACGAGTGCGAGATCTGCGGTGCGGGTTTCGTTTCTTCCACTAGCTACGAGGAGCATCAGTCCATGCATTCGCTCGAGAAACCTTTTCAATGCGAGATCTGTAGCGCCCCGTTTCGTTATCGTCAAGGATTGAGGTTGCACGCCAAGCTTCATCAGCCTGACTACGTGCCTCCTCAGAGAAAGCATCACTGCGAGCTCTGTAATAAACGCTTCTCCAGGAAGCAGGTGCTGCTGGTCCACATGAAGACGCACGGTAACGCGGGAACTCAGAACGAATATATTTGCCCAGTTTGCGGCAAGGCTGTGTCCAGTAAGACCTATTTGACTGTACATTTGCGTAAGCATACAGGAGAGAAACCACACGTCTGCGATCTCTGCGGTAAAGGATTTATCTCGCAGAACTATCTAAGCGTGCATCGACGCACGCACACGGGAGAAAGACCGCATAAGTGCACTCATTGCGAGAAACGGTTTACCCAGCGAACCACTCTGGTGGTGCACCTCAGAGGCCACACCGGCGATCGACCGTATCCCTGCACGTGCTGCCATAAATCTTTTGCCTCGAAAACCATGCTGAACTCGCACCTCAAGACGCACGCTAAGCAGAGCGCGCGTCAGCAGCAagagcaacagcagcaacagcagttgCAGCAGGAACAGGAGGTCCAGCACCAAGAACAagCTATTAACTTTTTGTGCCTGGAGTACGAGGAAACGAAAATAGAACCGATAGATACGCTGGAGGATATGGAACTGGTCAAGTACCAAAATGACATTTGCACGACCGAAGAGTTCGAACAGATCAGCCATCAGGAAATAGTGACCGAAACGTTAGAGTATACCGATGAGACAGAAGTGAAGCTGATCGAAGAACAGGAGGAGCAGGTAGAGGACATTAACAAAGATTTTCACAGGAAATGTTTGGTGATCTATGAGTGCGATATCTGCAGCAAGAGGATGCGGAAGAAGCTTCAGTTTCTGAAGCACAGGCAGGACCACGAGAGGAACAACGAGGAGATGAGTGGTCGTTGCGTGGAATGTGACAAAACGTTCACGGATGAGGAGAAGCTGAAGAAGCACATGATCAAAGTGCATCAAAAGGAGAAGCCGTTTCAGTGCGTGCTCTGCAATAAATGCTTCAAAACGGAGGAGTTCCTGAAGACGCACTTGAAACAGCACAACAAGCGTTTCACTTGTGATATCTGCGGTATCTCAAAGGTGTCTGGCTACGATTTGCGTCTGCACAAGAAGAAACACAACGAAGAATACGTGACCCACTGCGAGATCTGTGGCAAAGGCTTCTACACGAATCAGACCCTTGAGAGACACTTGCTCACCCATACAGGGCAGAAACCGTTTGTCTGCAAAGTGTGCAATACCCCTTATGCGAGTGCTGCTTATCTGAACACGCACATGAAGTCTCATGGTGAGAGGGAGAAACATAAGTGCAATATCTGCAACTTCGAGAGCTACTGGAAAGCAGCTCTGAAAGTGCATCTTAAGATACACACCGGCGAGAACTTAATCACCTGTGAAATTTGCGGGAAATCAGTCTCTAGTAAAGCTTACCTGCAAATACATATGCGTATACATTCAGGTGAGAAACCGCACGTCTGTGAAGTATGTGGCAAAGCCTTTAGCGTCCGGAAATATTTGATTGTACACTTGAGAACGCACACGGGTGAAAGACCGTATGAGTGTAAGGTGTGCCAGAAAAGGTTCACGCAACAGGGTTCTTTGAACTCACATATGAAATCGCATAATGAAAGAAACCTTCAGGACCAATCGACGAACCGACCATACGAAATTTCGAAAAGTTGCCGCGAAATCGAAAATCCAATCTTGAATTCACACGCGGAAGACCAGAAAGGAACGACGAAAAAAGAGGCAATCATCGAAGGAAAGAACTGCAGTTCCTCTGACCAAACCTCGAGGCAAACTTTCTATCAGTGTGAAGTGTGTAAAAAGCTTTTCAGGACAAAGAACCTGTACGAGGGCCATCTGGTGTCGCATAGCGATGCTCGACCCTATCAGTGCGACATCTGCGCAAAGTCCTTCAAGAGGACCAACACTTTAGCCGTCCATAGAAGAATCCACACCCGGGAAAGGAACTTCGTTTGCGACGTGTGCGGGCACGCGTTCGTTCAGGCCTTCCAATTGACCACCCATCAGAGACGCCATTTCGACAAGTACACGAGATACTGCGAGGTCTGTAAAAAGGGATTCTTCACGAATGCCGAACTACACGGTCACATGAACGTGAAGCACGGAGCCAAAGAACACGTATGTCACTCATGTAACAAGTCTTTTCCTAATAATCATACCTTGGTGAAGCATCTGAAGGTCCACGATCCGAATTTCAAGCCTGTGAAGCATCAGTGCGAGTTCTGTGGTAAGACGTTCGTGTACAAGAATTCTCTGGTGTTCCACGTGAAGTCACACATGGGTGAAAACAAGCACGACTGCCATCTTTGCGGTAAATCGGTGTCTTCCAAGGGATCTCTGCAGGATCATCTGCGACTGCACAGCGGAGAGAAGCTGCTGATCTGCGACGTCTGTGGTAAAGCCTTTCGCAAAAGGAGCACCTTGGTAGTTCACAAAAGGACCCACACGGGAGAGAAACCGTATACCTGTGATACATGTGGGAAATCGTTCACGCAACACTCCACGTTGGTCATTCACAAACGTTATCACACCGGTCAGAGACCGTATCAGTGCGAGTTTTGTAACAAATCGTTCGTTTCCAGGTCGTCGTTGAATGCTCACAATAAAGTGCACACGGTGAACGTCACCACGGTGGACCAAACGGAGTGA
Protein Sequence: MSSLDYLDLCRLCLVKDRVSVPIFEGEGDVRQIFLKIAACLPVKVTREDKLPKKICDDCVYKVELFYQFWNTTVNAEKQLLQWLGEVSLEDKQGYVTNVLNPSVMKQEQNTENRLDGNVMQQVGEHQNNMGMGMMDNMGLGIPMIISSANQQQITSVPMDTSGNSVQTVQAVPGPSSQTTHNQIPQNQTSSTQQEEEEESSEDEENSDEECDGDEGLPVKEESEEDPSNRTIEPTTFVNVSLACDEAGPSGLQQQKISDIPEMPMPQPADGDPKSGYFVSKLEMLPQDQQDCGPNDEIFDQEDTEQLLITNRLHVPKMENADIIISDGIVQCNLSGDGFVSDHALALHLKMHEQDEVQLQDDQLVCEHCGCSFATVSALKDHQLEHEANESYACETCGYITDHRESLIAHEKRHNIKYECEICGAGFVSSTSYEEHQSMHSLEKPFQCEICSAPFRYRQGLRLHAKLHQPDYVPPQRKHHCELCNKRFSRKQVLLVHMKTHGNAGTQNEYICPVCGKAVSSKTYLTVHLRKHTGEKPHVCDLCGKGFISQNYLSVHRRTHTGERPHKCTHCEKRFTQRTTLVVHLRGHTGDRPYPCTCCHKSFASKTMLNSHLKTHAKQSARQQQEQQQQQQLQQEQEVQHQEQAINFLCLEYEETKIEPIDTLEDMELVKYQNDICTTEEFEQISHQEIVTETLEYTDETEVKLIEEQEEQVEDINKDFHRKCLVIYECDICSKRMRKKLQFLKHRQDHERNNEEMSGRCVECDKTFTDEEKLKKHMIKVHQKEKPFQCVLCNKCFKTEEFLKTHLKQHNKRFTCDICGISKVSGYDLRLHKKKHNEEYVTHCEICGKGFYTNQTLERHLLTHTGQKPFVCKVCNTPYASAAYLNTHMKSHGEREKHKCNICNFESYWKAALKVHLKIHTGENLITCEICGKSVSSKAYLQIHMRIHSGEKPHVCEVCGKAFSVRKYLIVHLRTHTGERPYECKVCQKRFTQQGSLNSHMKSHNERNLQDQSTNRPYEISKSCREIENPILNSHAEDQKGTTKKEAIIEGKNCSSSDQTSRQTFYQCEVCKKLFRTKNLYEGHLVSHSDARPYQCDICAKSFKRTNTLAVHRRIHTRERNFVCDVCGHAFVQAFQLTTHQRRHFDKYTRYCEVCKKGFFTNAELHGHMNVKHGAKEHVCHSCNKSFPNNHTLVKHLKVHDPNFKPVKHQCEFCGKTFVYKNSLVFHVKSHMGENKHDCHLCGKSVSSKGSLQDHLRLHSGEKLLICDVCGKAFRKRSTLVVHKRTHTGEKPYTCDTCGKSFTQHSTLVIHKRYHTGQRPYQCEFCNKSFVSRSSLNAHNKVHTVNVTTVDQTE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -