Basic Information

Insect: Eudonia truncicolella
Gene Symbol: -
Assembly: GCA_949315975.1
Location: OX438827.1:14215869-14218905[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.12 11 7.4 0.0 3 23 39 59 38 59 0.97

2 8 0.081 7 8.0 0.5 2 23 163 185 162 185 0.92

3 8 3.3e-06 0.00029 21.8 0.9 1 23 198 221 198 221 0.98

4 8 5.4e-05 0.0047 17.9 5.8 2 23 265 286 264 286 0.97

5 8 0.0009 0.078 14.1 6.6 1 23 292 314 292 314 0.97

6 8 1.5e-05 0.0013 19.7 4.1 1 23 320 342 320 342 0.97

7 8 3.4e-05 0.003 18.6 3.2 1 23 348 370 348 370 0.98

8 8 0.12 11 7.4 4.2 1 20 376 395 376 396 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.12	11	7.4	0.0	3	23	39	59	38	59	0.97
2	8	0.081	7	8.0	0.5	2	23	163	185	162	185	0.92
3	8	3.3e-06	0.00029	21.8	0.9	1	23	198	221	198	221	0.98
4	8	5.4e-05	0.0047	17.9	5.8	2	23	265	286	264	286	0.97
5	8	0.0009	0.078	14.1	6.6	1	23	292	314	292	314	0.97
6	8	1.5e-05	0.0013	19.7	4.1	1	23	320	342	320	342	0.97
7	8	3.4e-05	0.003	18.6	3.2	1	23	348	370	348	370	0.98
8	8	0.12	11	7.4	4.2	1	20	376	395	376	396	0.94

Sequence Information

Coding Sequence: atgagTGCTTTTGCAGCATACTTACCTTGTCCTGTATGCGCACATACTGGTGTATTTGAATCAGTTCAGTCTTTAAAGGATAGATTAATTTATGTTTCCACTAACAGAATATTGTGTCCCGTTTGTCAAGAAGAAGTTTCAGGTTTGGATAAGTTGACAATCCATCTATTCAGTCATGTTAAAATACTCAATATGAAAAAATGTGAAAGTGCACCACAAGCATtggataataaaaatttaattccaTCGGAAAATCAAGGTGTTTCAGCTCAACAGAAGAAACCTAGACCTACATCTAAAAATAAGGCACCGTCCTCGATAACCGTTGCACCAATgaagtatgtaaaaatatatccaAAACTACCGGTAATATCCTTAAATACAGTGCCAGTTATAGACATATCTTGTGGATCTATTGATGACCGCTTACAACCCGCGCATTTACCAACTGTAAAGACGGAAGCAACATTTACTCAAACAAACACAACTTGTGATGTTTGCggtttacaatttataaacgcTGATATTTTGAAAATGCACAAGTGCCTTATACATAATATAGATGACATCACAAATCAAAATGTTACACGTTATCAGTGTCATTTATGTccaaagaattttaaaatgagAGGCTCTCTTATGGTACATTTGAGGGTAGCTCACTATGGATTTCTGTCTGAAAACTGTGTCGCTGATACAAAAATCAATAATGGAGGACAAGATGGAAAAAGTACCGAGCAAAATAcagataacaaaattatattgttagaAAGAAACGATAATAAACAATGGCAATGTGATGTGTGCCGAAAATGTTTTACTAccaaatattttctaaagaaacATAAACGTCTTCATACAGGTGAAACTCCATATTCCTGTACACAGTGCAACAAAACGTTTACGTTTCAACAATCATATCACAAACACCTCTTATATCATAATGACGAAAAGCCTCATAGTTGTAGTTATTGTGGACGAGCTTTTAAAGAGCTATCTACTCTACACAATCATCAACGAATTCATACAGGGGAAAAGCCATTTTCTTGCGAATCGTGTGGAAAATGCTTTCGCCAAAGGGTTTCATATTTAGTCCACAGAAGGATACATACAGGAGTCATGCCATACAAATGTACAGCTTGTGAGAAAAGTTTTCGATACAAAgtatcTCAAAGAACTCACAAATGCCCATCAAAGCCTCCAGGCACAGTCATACGCAAAACCGGAGATCTAAttgagaaacttaaaaaaaaacacgcgaCCTCGGAAAAAGGATCTTTGGAAAATGCAGAGCAGAGTATTCCTTCTACCTCAAATTATCTCGAAGTATCAGAAGCTAACGCTGAATTAGCTCTTACTGGCGCAAAACTATCATTAGAAGACATGGAATCGgaaaatttcacattaattgCCGACACATAtgacagaaataaaaatattaagcaacAAGAAATAGCAGCTTGTTCTACACCTTTCACAAATGGGCATGATACAAATTCCAAAGAAAATAACACCAACCTCGATACATTTATTGATACGATTCCTGTAACTGATAAAGACATTCCTTCACCTTCTGAGATTCTAAAGAACCTGTGCTTGTCTAAAGAAGAAGATTTTATTGATATACTTCAAGAACCGGAAAACGACAATAACTATGATTTGTACAAagattttgaagttttcatGTAG
Protein Sequence: MSAFAAYLPCPVCAHTGVFESVQSLKDRLIYVSTNRILCPVCQEEVSGLDKLTIHLFSHVKILNMKKCESAPQALDNKNLIPSENQGVSAQQKKPRPTSKNKAPSSITVAPMKYVKIYPKLPVISLNTVPVIDISCGSIDDRLQPAHLPTVKTEATFTQTNTTCDVCGLQFINADILKMHKCLIHNIDDITNQNVTRYQCHLCPKNFKMRGSLMVHLRVAHYGFLSENCVADTKINNGGQDGKSTEQNTDNKIILLERNDNKQWQCDVCRKCFTTKYFLKKHKRLHTGETPYSCTQCNKTFTFQQSYHKHLLYHNDEKPHSCSYCGRAFKELSTLHNHQRIHTGEKPFSCESCGKCFRQRVSYLVHRRIHTGVMPYKCTACEKSFRYKVSQRTHKCPSKPPGTVIRKTGDLIEKLKKKHATSEKGSLENAEQSIPSTSNYLEVSEANAELALTGAKLSLEDMESENFTLIADTYDRNKNIKQQEIAACSTPFTNGHDTNSKENNTNLDTFIDTIPVTDKDIPSPSEILKNLCLSKEEDFIDILQEPENDNNYDLYKDFEVFM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01335430;
90% Identity: iTF_00682827;
80% Identity: -