Basic Information

Insect: Eudonia truncicolella
Gene Symbol: prg
Assembly: GCA_949315975.1
Location: OX438827.1:7133512-7135330[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.22 19 6.6 1.8 1 19 177 195 177 200 0.79

2 10 0.007 0.61 11.3 0.5 1 23 206 229 206 229 0.96

3 10 1.1e-05 0.00097 20.1 3.5 1 23 235 257 235 257 0.96

4 10 1.9e-06 0.00017 22.5 5.1 1 23 263 285 263 285 0.99

5 10 1.7e-05 0.0015 19.5 0.1 1 23 291 313 291 313 0.97

6 10 0.00015 0.013 16.5 0.8 1 23 319 341 319 341 0.97

7 10 6.9e-05 0.006 17.6 1.0 2 23 440 462 439 462 0.95

8 10 4.3e-05 0.0038 18.3 0.8 1 23 468 490 468 490 0.96

9 10 7.5e-06 0.00065 20.7 3.2 1 23 496 518 496 518 0.98

10 10 0.00051 0.045 14.9 0.0 3 23 527 547 525 547 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.22	19	6.6	1.8	1	19	177	195	177	200	0.79
2	10	0.007	0.61	11.3	0.5	1	23	206	229	206	229	0.96
3	10	1.1e-05	0.00097	20.1	3.5	1	23	235	257	235	257	0.96
4	10	1.9e-06	0.00017	22.5	5.1	1	23	263	285	263	285	0.99
5	10	1.7e-05	0.0015	19.5	0.1	1	23	291	313	291	313	0.97
6	10	0.00015	0.013	16.5	0.8	1	23	319	341	319	341	0.97
7	10	6.9e-05	0.006	17.6	1.0	2	23	440	462	439	462	0.95
8	10	4.3e-05	0.0038	18.3	0.8	1	23	468	490	468	490	0.96
9	10	7.5e-06	0.00065	20.7	3.2	1	23	496	518	496	518	0.98
10	10	0.00051	0.045	14.9	0.0	3	23	527	547	525	547	0.92

Sequence Information

Coding Sequence: ATGGAGGACTCCTACATTATAGCTAATTTCCATGCTCTCTGTCGACTGTGCCTCAACAAAAGCTCGTTTACTGTTTCGTTATTTGGGGCAGCACCAGACGACGAGGCCAATTTTTCTCTAACCTCTAAAATTGCCGAATGTTTCGAGCTACAGATGGAACCTAATGATGGGCTGCCTAACAGAATATGTTACAAATGTCTATTTAAGCTTGACAAATGCTGCAAGTTCAAACTGCAGTGCATACAGAATGAGACAAGATTGAGGCAAATTACTAATCGTTCTGGTGAAATGGACAATTCCAATTCCTCAGAATTAAGTAGCTATAATTACACAAATTGCCAAGACTTACTAAAACCGAAACCGGAAGATTATATTGTGGAAGACAGTGTTGTGATGGTTGTTGATCCAAGCCTCGATTATGATTCATCAGAAGAGTCTGAAACTACAGAGCAAGCTGAAAATGATACAACTGAACGAGTTAACACTCCAGATGGAGAGCCAGTGCCAGAGTCTTTCTTTAAGAATGTATTCATGTGTCAATACTGTGACCAGGCTTTTATCTCCCAGGAGAAATGTTCAGAGCATGAAGAGAACTACCATGACCCTAACTTGCCATATAAATGTGTAGAATGCAGTTTAGTTTTTGCTGAAAGGACTCAATATGTGCAGCATACAAAACAAGTCCATGGAAATGATAAGCCTTACCACTGCCCTGAGTGTGAGAAGTGTTTTGGAAGACGCTCAGATTTAAGGAAACATTCAATTGTCCATACAGGGATAAGACCATACCAATGTcacttttgtttaaaaagtttctcaCGTAATACCAACTTAAGTAAACATCTGAGAATTCAtgctggccataaaccacatgTTTGTCCATTGTGCCCGCGGAGTTTCGTTGCTAAGGGTGATTTGCAGAGGCATGTACTTGTACATTCTGGTATGAAACCTTACGCATGTAAGAAATGCCCTCTAACATTTGGTAGGAGAGACAAGTTACTCAAACATGAACTTCGACATGGCCCCACGAGTAGAAAACCTAAAAGTAAATTTCACAATGATGATACTCATGATATGGTAGTGAACGTTAATCCTTTCAGCAACTTAATGACCTCACCTAACCAACTTGACCCTGATTCAGCTAATACGGAATATGACCTACCCAGAGTGCCTGACCACATTTCAGGAGAAAGCAGTTTTGTTAATCAAGTTAGGAAACGGAGTCAAGCCAGAAACCCTTCCACTTCTGGTAAGCAATTACAAAGCTCTCCTACTAAATTGAAGACATTAGCTAAGAATAgacctaaaaatataaaatgtcatcAATGTCCAAAGAGATTTTCTTCTTTAGATGCATATAAAACTCATGTTTCCATCGCACATATTGGTTCAAGGGTTTTTCAATGTAAAATATGCTTTAAAAAGTTCCCTAGGAGAAGAGAATTGGACCGGCATGCTGCTATACATTCCGGTATGAAACCCTTTTCCTGTAGTCAGTGTGATAAAAAGTTCACTAGGAAGGACAAATTAGATAAGCACGAACAAACTCACGAATGCTTGGTTGTGAATATGCCTTGCATAGAATGTGGTGCAGTTTTTGAGAAGAAATCAGATTTAGTAGCGCACATTAAATCACATTTTACTGAAAACTATGATGAAAAGAGCTCCGAGACTGAGATAAAGAAAGAAGATGAACCTGATTTCCCATTAGACAATAACTTCTATGATTTAGGTACTTGA
Protein Sequence: MEDSYIIANFHALCRLCLNKSSFTVSLFGAAPDDEANFSLTSKIAECFELQMEPNDGLPNRICYKCLFKLDKCCKFKLQCIQNETRLRQITNRSGEMDNSNSSELSSYNYTNCQDLLKPKPEDYIVEDSVVMVVDPSLDYDSSEESETTEQAENDTTERVNTPDGEPVPESFFKNVFMCQYCDQAFISQEKCSEHEENYHDPNLPYKCVECSLVFAERTQYVQHTKQVHGNDKPYHCPECEKCFGRRSDLRKHSIVHTGIRPYQCHFCLKSFSRNTNLSKHLRIHAGHKPHVCPLCPRSFVAKGDLQRHVLVHSGMKPYACKKCPLTFGRRDKLLKHELRHGPTSRKPKSKFHNDDTHDMVVNVNPFSNLMTSPNQLDPDSANTEYDLPRVPDHISGESSFVNQVRKRSQARNPSTSGKQLQSSPTKLKTLAKNRPKNIKCHQCPKRFSSLDAYKTHVSIAHIGSRVFQCKICFKKFPRRRELDRHAAIHSGMKPFSCSQCDKKFTRKDKLDKHEQTHECLVVNMPCIECGAVFEKKSDLVAHIKSHFTENYDEKSSETEIKKEDEPDFPLDNNFYDLGT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01081816;
90% Identity: iTF_01335269;
80% Identity: -