Basic Information

Gene Symbol
SMARCC2
Assembly
GCA_949315975.1
Location
OX438844.1:7527633-7557253[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.8e-15 6.5e-12 46.0 0.1 3 44 597 638 595 640 0.95

Sequence Information

Coding Sequence
ATGACGACTATAGGTCCTAAGAAGGACGGTGGCCCCAATGTGGATTATTTTCAAGCACCAGAATCCTTGGCTCAATTTGATCAAATTCGTGTTTGGTTGcagaaaaattgtaaaaagCATGTTCAAACTGACCCCCCAACTAAGGAGGGATTGGCGCAGCTGGTAATACAACTCATACAGTATCAGGAAAACAAACTGGGAAAGAATGCTTCAGACCCTCCATTTTTGAGACTTCCAATGAAAGTGTTCATGGACATGAAACCGGGCGGTTCGCTCTGCACCGTGCTCGCCACCATGTTCCGTTTCAAGTCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGAACCCCTCCCGCAAAGACCTGAACGTTCAAATGATGATGGAGATAGAGTCTTCGTTAGTGAGCGCGGAGATTATCAGGACTCCATGCGTGTACATACGGCCCGATGTCGACAAGGCAACGGCGAATAAGGTCAAGGACATTGTTGGACACCACCAAGGAGATATTTGTGAGGATGAAGAGGACGCGACCCACATAGTATACCCGACGGTGGACCCGCTGGAGGAGGAGTACGCGCGCCCCGTGCTGCGGCGTGGCAACAGCGTGCTGGTGCACTGGTACTACCTGCCCGATAGCCACGACACCTGGGCGCAGGCCGAGCTGCCGGTGGACGTGCCAGAGAGCGTGAACTGGGACTGCAACCGGTCGGAGCCGTGGCGCGTGTCCGCGTCGTGGGTGCTCGACCTGCCGCAGTACAACGAGTGGATGAACGAGGAGGACTACGAGCTCGACGCCGCCGGCAAGAAGAAGGTGCATAAGCTTCGTCTTTCCGTGGATGACCTGATCCCGGGCGCCGAGCCATCAGGCAAGGCCAAGAAGGGAAGCAAGAGGAAGCGCTCCCCCTCCCCCCCGCCGCAGAAGCATGGCAAGAGGAAGAGCCGCATCTCGAAGCGTCGCGACAACGACGCGGACGACGAGGAAGACAACGCGTCCAGAGATAACACAGACGCCGCGCCCACGCCCGAGAGCGAGCGCTCCACTGAAACCCCTGCGGCAGTGGCTGAGCCCCCGGCGCCGCCCCCGGCTGTGGAAGCACCCACCACCCCCGCCCCCCCTATGGACACGCACGACGATTCGCAGGGAAAACACTCCGATTCTAATACGCAGGAAATGACAGTCAAAGAGGAGCTTGAAGACAACGTGACCGACCAGACGCACCACATAGTAGTTCCGTCGTACTCCGCCTGGTTCGACTACAACTCCATACACACTATTGAGAAGCGAGCGCTGCCTGAATACTTCAATGGAAAGAACAAGTCCAAGACGCCGGAGATCTACCTCGCTTATAGAAACTTCATGATCGACACGTACCGTCTGAACCCGACGGAGTACCTTACCAGTACCGCCTGCCGCCGCAACCTGGCCGGCGATGTCTGCGCCATAATGCGCGTACACGGATTCCTGGAGCAGTGGGGGCTTGTCAACTACCAGATTGAGGCGGAGTCGCGGCCCACGGCGATGGGCCCGCCGCCCACGTCTCACTTCCACGTGTTATCCGACACGCCGTCGGGCCTGCAACCGCTGGTGGCGCGACCGCCGCAACCGAGACCGGCGGAGAACGCGGCCGTGCCTAAAGTGGAGGCCGGATTACCCAACGGCACGGAGGCCGTTTCGGGAGGCCCCCCAGTCCCCGCCGCCGGGGCCGCCGTCAAGCCGGAGCCCGGCCTCGAGCTCGGGGCCGCGCCGGGCCTCAAGCTGGATCAGtACCGCGGAGGCGCTCGCGGTCGCGAGTGGACAGAACAAGAGACGCTGCTCCTGCTCGAAGCTTTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCAGGACGAGTGCATCCTGCACTTCCTGCGGCTGCCCATCGAGGACCCGTACCTGCACGACGCGGCCTCGGGCGGTGTGTTAGGCCCGCTGGCGTACCAGCCGATTCCGTTCAGCAAGACAGGAAACCCAGTTATGAGCACCGTGGCTTTCCTCGCGTCCGTCGTTGACCCGCGCATCGCTTCAAAGGCCACCAAAGCGGCCATGGACGAGTTCTCCGCTATCAAGGACGAAGTGCCCGCCGCCATGATGGAGGCCCATGTAAAGGCCGCCGCGGCGCAGGGCCCGGGGCCGGCGCTCGCCGCCACCGGCATCGCCGGCACCGCGCCCGACCACGAACCCGCGCCCGCCGCAGGCGAGAAAAAAGATGACGTGAAAACGGAGCCAATGGAGGTAGAGGAAGGCGAAGCGAAAGTGAAAGAGGAGGCTCCGGAGGCGCCAGCAGAGGACAAGGACAGCAAAGACGACGTCTCGCCACAACCggACGCCCCAACAACGGTGGACTCTAAGCTCCAATCGGCCGCGGCCGCCGCTTTAGCCGCTGCAGCAGTGAAGGCAAAGCATCTCGCGGGCGTAGAGGAGAGAAAGATCAAGTCGCTGGTAGCGCTGCTAGTGGAAACGCAAATGAAGAAGCTGGAGATAAAGCTCAGGCACTTCGAGGAGCTGGAGGCCACCATGGAGCGGGAACGTGAAGGCCTGGAGTACCAACGCCAGCAGCTGATCCAGGAACGCCAGCAGTTCCACCTGGAACAGCTCAAGGCGGCGGAGTTCCGCGCGCGCCACCAGGCGCACCAGAGGCTCCAATCGGAGAGCGGGGGCGGGCCGGCCGCCGCGGCGCCCGAGCAGCCGCCGCCCGaagcgcccgcgccgccgacGCACCACGCTTAG
Protein Sequence
MTTIGPKKDGGPNVDYFQAPESLAQFDQIRVWLQKNCKKHVQTDPPTKEGLAQLVIQLIQYQENKLGKNASDPPFLRLPMKVFMDMKPGGSLCTVLATMFRFKSEQRWRKFDFQNPSRKDLNVQMMMEIESSLVSAEIIRTPCVYIRPDVDKATANKVKDIVGHHQGDICEDEEDATHIVYPTVDPLEEEYARPVLRRGNSVLVHWYYLPDSHDTWAQAELPVDVPESVNWDCNRSEPWRVSASWVLDLPQYNEWMNEEDYELDAAGKKKVHKLRLSVDDLIPGAEPSGKAKKGSKRKRSPSPPPQKHGKRKSRISKRRDNDADDEEDNASRDNTDAAPTPESERSTETPAAVAEPPAPPPAVEAPTTPAPPMDTHDDSQGKHSDSNTQEMTVKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALPEYFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHGFLEQWGLVNYQIEAESRPTAMGPPPTSHFHVLSDTPSGLQPLVARPPQPRPAENAAVPKVEAGLPNGTEAVSGGPPVPAAGAAVKPEPGLELGAAPGLKLDQYRGGARGREWTEQETLLLLEALELHRDDWNRVAAHVGTRTQDECILHFLRLPIEDPYLHDAASGGVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASKATKAAMDEFSAIKDEVPAAMMEAHVKAAAAQGPGPALAATGIAGTAPDHEPAPAAGEKKDDVKTEPMEVEEGEAKVKEEAPEAPAEDKDSKDDVSPQPDAPTTVDSKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQRLQSESGGGPAAAAPEQPPPEAPAPPTHHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00113278;
90% Identity
iTF_01281293;
80% Identity
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