Etru021667.1
Basic Information
- Insect
- Eudonia truncicolella
- Gene Symbol
- -
- Assembly
- GCA_949315975.1
- Location
- OX438846.1:11926527-11935393[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-09 1e-06 29.0 0.0 2 39 16 53 15 57 0.91 2 2 8.5 6.7e+03 -2.5 0.0 28 35 455 462 454 467 0.78
Sequence Information
- Coding Sequence
- ATGCCTCGGAATTATGAGAGAAGATCATCGCGTGCTTCATACTCTCAAGATGACTTACAAGCCGCCATAGAAAAGGTGAAAAGCAATGAGCTATCTAACTATGCAGCTTCGCAAATATATGGAATTCCTAAATCCACACTTAATGACAGAGTTAGGAATAAATCTGGTGTAATCAGTCAAACCTTGGGACGGCCACTAGCAATTCCCCTAGCATTGGAATCGGAGCTCGCGTCTTGTCTTCGCACTCTTGAAAAATGGGGATGGGGATTGTCACGTGACGAAGTGCAGGAGATAACTGCAgaattcattaaaaagaataaattaaaaacaccaTTTGCAGATGGGAAACCTGGCGCTGATTGGTTCATCTCTTTTAGGAAGCGCCACTGTTTATCAATTAAGAAGCCGCAACCAGTCGAATATCTACGAAAGAGAATGACTGATCCCTTTGTGGTGTACGATTACTTCAAAAAATTGGATGAAGTATTAAAAGAGCTTAATCTTGGGTCATTGCCAGACAGGATCTGGAATTTAGATGAGACCTCGGTCTGTCTAGATCCAACGAAGACAAAAGTAGTTGGTGCAGTAGGCAAACCATGCACAAGAACCATCGCTGGTAGCGCCAAAGAAAACATTACAGTATTAACTACAGTCAACGCAGCTGGCAAAAAATTGACTcctttaataatatacaaaggCAAACACGTTTATGATGAATGGATGGCGGAGGACAAACAGGAGTATGATTTTGACATATCTTATGCAGCCAGTAATCGCGGCTGGATGGAAACGGAGATCTTTTATAACTACATGTTAAAAATCCTTATTCCCAGTTTGGGACCAGAACGACCCGTTCTGATTATTTATGATGGGCATAGCACCCATGTTGACAGCAAGGTTGTATCTTTGGCCATAGACAACAATGTGACTATACTGAAATTGCCAGCGCATACATCACACTTGCTCCAGCCGTTAGATTTAGCGGTATTTAAGTCTTTGAAGACCATGTGGGACAAAAAGCTTGTTAAATTTCAACGACAAAACGTCGGTGTCAAATTACGCAAAAAGGCTTTTGCTGAAATGTTTGCGGAAACATGGAATCAAACAAGTCCGAAAGTGATACAAAGCGGCTTCAAAAAAGGAGGCATTTATCCGTTTGACGCCGATGTAATCCCAGAGGAAAAATTTGACCCAACAGCTTTAAACAGATGGAAGATTTATGGAGCAAAAAAGGAGATAAAGCCCCTCAAACCACTTAAGCAGCTATGCTTAGAGACTATAAACAACGTTATGTTTTTCCCGACAGCTGCCTATACAATTCAGAGTGTTGCCTATTGTGACGCTGAACATCCTGATCCATCGGTACCAAAAAGTACGTTTGAGGAATTATTTTTACAGACGCTTAAATATCATCCCCAAACCACAAACAAAGTAACACGAAAACGTGTTGCATCCGGAGCTGAAGTTATCACACGCCAGATTTTGGAAAACAAGAAAAACGAACAGCATAAGACATCCAAAGAAACATTGCAACAGCTGAAAACAAAGTCAaccaaaatcaaacaaaattcaaaaagttCTCTGAGTGGCACTGCAGTTCAAGTTAAAGTTGATTTGATGGACAAGAATATAGATGATTCTAGAAAAATTGGACAAAACAAAAGGAAAGTCAAAACTGAGACGGAACctcgaaaaaaaattaaaacgtgtTCGAGTACCTTAACTTCCATCAGCGAACAAATAAATTTTCAGAGCGATTCTGATGTCTTAGAAGACTGCGAAAATTTTTCAGAATTTGATCTATTTAAGTGGATTGAGGATGATGATGCACGTGATATGGATGGATTATTGCGAAAATCAATCAAAAAGTCACAAAAAGATTTGAATAATGATTTGCAGTTTGATTTGATACAAATGGAATCGGAGATGAAAAACGATCTACAAGAACAGAAGATTAAAAACGTTTGGAATTTAGACACAGGACATAAACATGAAGACGAACATAGTGATATGATAGATATTTTGGATGATCAAACAGGATTTCTGCGAAAAGTGACAGTTACTAAGGCGATAGTAGAGAAACCAAAGCCATCAAAGGACTCCGTAAGTTGCAAATATCtcgaaaaatataaagaaaatgttgCTGATATCGTAAACCACCGAAACCGTAACGAAATACAGTCatataccaaaaaaaatgtaaagaaacgaacaagtacaaaacctaaaaaaaagaagatattgCGTAGTAGCTCTACAACTACGGACGAAGATATTATGAGCGTTCATACTGATAGCGACATATGTGACGTAATATCGATTCAAAACGAGGAAGAAGATGAAAATGTAATAGTAGTAGTACCGACTCAATATGAAGAAAACGATAAAGATTTATTCAGAAAATCTATTGATGAAAAAGAAGCTGCTATATTtgcaaaaatttatgaaatcgACAACATTGAAAAACAAACACTTATTGACAAAGAGAAACCAAAAACTAGGAAGAAAAGAGATGTACAAAAACTAGAAAGGCAAATAGTGACTCGGCAGACTAATAAAAAGCagaaaaagaatgaaaaaaaagaaaacgaagATATGGCATCACAGACTCGAAGTCGTCACCTTGAGGGAGATGAAATTGCAGCTGCTTTGTTGGATTCTGATGACGAAGAGATAAACTTAGGAGAAGATTCAGAAGATGAGCCTGACGGTGTTATCGAGGATTTCCGGGACCATTCTGAAGTCGCATCTCATGAAGACAGTGATCAAGATAGTGTGGAGGGAGATGAAGAGCATTTAGTGCCTGACAATGACGGGGCTGGTATAAATGAAGAAGAAGGTTACATGATAAATGGTCTTATGTACTTGGGAAAAGAGAATGCGCCACGTGAAGTTCCAGTGGCGGAGCACTATGTCATGGAACTGACTGCTCCCGTACAAGATCTAAACAGAAACCTGACATGTGACAATTGGTTCACTTCTATCCCCACAGCCAAGAAGTTACTGGAAAAAGGGATAACATTAGTTGGaactgtaaagaaaaataaacgagAAATTCCTACTGTTTTCTTGGACACTAAAAATCGAGAGAGATGCACATCAATGTTTGCCTACGACGGACCTCTCACACTTTTGTCGTATTGTCCTCTGAAGTCAGCTAAGAAGAAAGTTGTAATCATGCTGTCCACCATGCATGACAGGCCTGACAAGGATAATGAAGTGTACCTTCCAGAAATAATACATTTCTATAATAAAACCAAATGCGGGGTGGATGTGTTCGACCAACTTTGTAAGAAGTACTCCGCGTCCAGGAAGACCAAAAGGTGGCCCATGTGTATCTTCTACGGGTTGCTAAATGCCGTTGGTGTCAACTCTTGGGTCTTATTCAAGCTGTCAAGTAACATTGATAAAGAGAAAATAACCAAGCGGCGTGAATTTCTTAAGAGTCTGTCAATGGCACTCATAAGGCCTCATATGAGAGCAAAATTACAATGGCCAAGTTTACCCCGGGATATCAAACAAACTATACGTGCAGTCTTGAATATTCCTAGTGAAGATCATAGGCCGGTCCCCGATAATCCCAAACCCGGTCGCTGCTGCTTCTGTCCGCGCACAAAGGACAGAAAATCTCGATCTGTCTGTAACGCTTGTCGCCGCCATATTTGTGTTGACCATCAATACAAAATCTGTCCTACATGTAACGACAAAAATgtctattag
- Protein Sequence
- MPRNYERRSSRASYSQDDLQAAIEKVKSNELSNYAASQIYGIPKSTLNDRVRNKSGVISQTLGRPLAIPLALESELASCLRTLEKWGWGLSRDEVQEITAEFIKKNKLKTPFADGKPGADWFISFRKRHCLSIKKPQPVEYLRKRMTDPFVVYDYFKKLDEVLKELNLGSLPDRIWNLDETSVCLDPTKTKVVGAVGKPCTRTIAGSAKENITVLTTVNAAGKKLTPLIIYKGKHVYDEWMAEDKQEYDFDISYAASNRGWMETEIFYNYMLKILIPSLGPERPVLIIYDGHSTHVDSKVVSLAIDNNVTILKLPAHTSHLLQPLDLAVFKSLKTMWDKKLVKFQRQNVGVKLRKKAFAEMFAETWNQTSPKVIQSGFKKGGIYPFDADVIPEEKFDPTALNRWKIYGAKKEIKPLKPLKQLCLETINNVMFFPTAAYTIQSVAYCDAEHPDPSVPKSTFEELFLQTLKYHPQTTNKVTRKRVASGAEVITRQILENKKNEQHKTSKETLQQLKTKSTKIKQNSKSSLSGTAVQVKVDLMDKNIDDSRKIGQNKRKVKTETEPRKKIKTCSSTLTSISEQINFQSDSDVLEDCENFSEFDLFKWIEDDDARDMDGLLRKSIKKSQKDLNNDLQFDLIQMESEMKNDLQEQKIKNVWNLDTGHKHEDEHSDMIDILDDQTGFLRKVTVTKAIVEKPKPSKDSVSCKYLEKYKENVADIVNHRNRNEIQSYTKKNVKKRTSTKPKKKKILRSSSTTTDEDIMSVHTDSDICDVISIQNEEEDENVIVVVPTQYEENDKDLFRKSIDEKEAAIFAKIYEIDNIEKQTLIDKEKPKTRKKRDVQKLERQIVTRQTNKKQKKNEKKENEDMASQTRSRHLEGDEIAAALLDSDDEEINLGEDSEDEPDGVIEDFRDHSEVASHEDSDQDSVEGDEEHLVPDNDGAGINEEEGYMINGLMYLGKENAPREVPVAEHYVMELTAPVQDLNRNLTCDNWFTSIPTAKKLLEKGITLVGTVKKNKREIPTVFLDTKNRERCTSMFAYDGPLTLLSYCPLKSAKKKVVIMLSTMHDRPDKDNEVYLPEIIHFYNKTKCGVDVFDQLCKKYSASRKTKRWPMCIFYGLLNAVGVNSWVLFKLSSNIDKEKITKRREFLKSLSMALIRPHMRAKLQWPSLPRDIKQTIRAVLNIPSEDHRPVPDNPKPGRCCFCPRTKDRKSRSVCNACRRHICVDHQYKICPTCNDKNVY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -