Etru013942.1
Basic Information
- Insect
- Eudonia truncicolella
- Gene Symbol
- -
- Assembly
- GCA_949315975.1
- Location
- OX438837.1:17227283-17245439[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.7e-11 7.7e-08 32.6 0.0 4 39 238 274 236 278 0.90 2 4 5.8e-11 4.6e-08 33.3 0.3 2 39 290 327 289 330 0.92 3 4 5e-15 4e-12 46.3 0.0 2 45 345 389 344 389 0.96 4 4 2.8e-17 2.2e-14 53.5 0.0 2 43 397 439 396 440 0.95
Sequence Information
- Coding Sequence
- ATGCGTCAGCGGCGTCTTGCCCGGCAGGTTGGTGCGGCCGAGCGGCACGGCCAGCAGTCGCGGCCAGCGGAATCTCTCACATGGCACGTGCGGCGTGCGGTGGTATGGCGGGGTGGTAGTGCGTGGCGCGCGGTGCGCTCGTGGTGGCGTGGTGTGGTGCGGTGCAGCATGCCGGGCCGCGGCGCGCGCGTCAAGAGCGAGCCGCCGTCCGACGGAGAGGGCAGCGACTCCCAACACCCACAGCATTCTCAGCAGTCGCATCGCTACTTCACTGGTCAACTCCCGTCGCTGGGTCATTGTCCAGTCAAATTGGAAGATGATTGCCAACCTGCAGAGGACGATCCGACGCGCCTTTTGCGACACTTACAGTCAGGGTTGGAGGAGCtagcgccgcccgcgccggcggGCCCCGCCGCCACGCCGGTGTGCGTGAAGCAGGAGCCGGCGGAGGCGCCGCCCGCCGTCATGCTCGAGAATCTGCAGCCCGCACCGCCCAGCAACGCCACGTGCTCGACGTTGCTAGACCGACATATCGCAATGCTCAGCTCCACCGAAGTGCCTGACTCATCGGACTTTATGCCGCTAATGGCTGTAAAGGACGAGCCGTTGTCTGAAGGGGAACATCAGTTCAGTGGCGAGGACACGAACGACTCGTGCAGCCAGCCGGAGCCCGGCCACACGCGCAGCAGCCCCAAGAGCTGGAATCAGCGCGACATGGACAACGCGTTGGAGGCCTTGAGGAAGCACAACATGAGCCTTACTAAGGCGTCGGCGATGTACGGCATTCCGTCGACGACGCTGTGGCAGCGCGCGCACCGGCTGGGCATCGACACGCCCAAGAAGGAGGGCGCCGCCAAGTCGTGGAGCGAGGCCGACCTGCGCGGCGCGCTGCACGCGCTGCGGGCCGGCGCCATCTCCGCCAACAAGGCTAGCAAGGCGTATGGCATCCCGAGCAGCACGCTGTACAAGATCGCGCGGCGCGAGGGCATCCGGCTGGCGGCGCCGTTCAACGCGGCCCCGACGGCGTGGCGCCGCGCCGACCTGGAGCGCGCGCTCGCCTCCATCCGCTGCGGCGCCTGCAGCGTGCAGCGCGCCGCCTCGCAGTACGGCATCCCCACCGGCACATTGTACGGGCGATGTAAACGAGAGGGCATTGAACTGTCCCGGTCCAACCCTACGCCGTGGTCGGAAGGCGCGATGGGAGAAGCACTAGAAGCCGTCAGGGTTGGCCAGATGTCCATAAACCAGGCCGCCATCCACTTCAACCTGCCATACTCGTCGCTCTACGGCCGGTTCAAGAGGTGCAAATACCAGGCACAGGGCATCCCACCTATACAGCCGGACATGCAGAAAGGCATGGAAATAGATAACAGCCAGAGTGTACCCCCTGAGGGACAGTACTACCCGCAGCAGTTGGCCGGCCAGCCGCACGAGCACGAGCTCAGCCTGCACAGCCAGTACCTGAGCCCGAGCTTCGCGGAGTACGCGGGTGGTGGGGCGGAGCTGGGGGGAGCGGGCGCGGAGCCCTACGCCGCGCTGTACTACGGCTGCAGCGCCGGCGTGGCGGGCAGCTGA
- Protein Sequence
- MRQRRLARQVGAAERHGQQSRPAESLTWHVRRAVVWRGGSAWRAVRSWWRGVVRCSMPGRGARVKSEPPSDGEGSDSQHPQHSQQSHRYFTGQLPSLGHCPVKLEDDCQPAEDDPTRLLRHLQSGLEELAPPAPAGPAATPVCVKQEPAEAPPAVMLENLQPAPPSNATCSTLLDRHIAMLSSTEVPDSSDFMPLMAVKDEPLSEGEHQFSGEDTNDSCSQPEPGHTRSSPKSWNQRDMDNALEALRKHNMSLTKASAMYGIPSTTLWQRAHRLGIDTPKKEGAAKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLERALASIRCGACSVQRAASQYGIPTGTLYGRCKREGIELSRSNPTPWSEGAMGEALEAVRVGQMSINQAAIHFNLPYSSLYGRFKRCKYQAQGIPPIQPDMQKGMEIDNSQSVPPEGQYYPQQLAGQPHEHELSLHSQYLSPSFAEYAGGGAELGGAGAEPYAALYYGCSAGVAGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -