Basic Information

Gene Symbol
XBP1
Assembly
GCA_949315975.1
Location
OX438831.1:3368221-3369723[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-18 1.7e-15 57.4 7.0 2 52 44 94 44 96 0.97
2 2 0.0005 0.62 10.8 0.3 34 55 90 111 90 116 0.88

Sequence Information

Coding Sequence
ATGAGTGCACCGATAATTATCACAGTACCAAATAACTTCTTGACGGTGGAGGAAGTGGACTCCGAGGTGTTAACTGACGCGGAGTCTCCACCACCGTCAAGAAAGAGGCGCCTGGACCATCTCACATGGGAGGAGAAGATGCAAAGAAAGAAGTTAAAGAACCGTGTGGCAGCGCAGACGTCACGCGACAGGAAAAAGGCTAAAATGGACGAGATGGAGTATCAGATCAAGCAATTGGTGGATGCGAACGAGCGTCTAACGAGTGAGGTGTCGAGTTTGAAGGCTCTGAACGAGCGTCTGTTGAGTGAGAACGCGTCGCTACGCAGCGAGGCGGCGGCGCGGACCGTCGCGGGGGCCCGGGGACCGGCAGAGTCTACTCCTCGGCAGCAGGAGGGGCCCCCGTCGGCGATCCGCGCGGCGCGCATGCTGATGACGATGTGCCTGCTCTCGCAGACCTCCTCGCCCACCTCGACTCCGACGAGTATCTCGACACCCTCCATCAACTTGCAGACTCCCTCCTCAAAGAAATTGATGCAGGTGCTGCAGGAGCGGTTGAAGATGTCCCAGACCGGGTCCGCAGAGAGCGTCCTCAAGGAGTTGAAGTGGTGGGGACCGCAGCAGAGCACCTGGAATCCGGTGAAAGTTCAGTCGTAG
Protein Sequence
MSAPIIITVPNNFLTVEEVDSEVLTDAESPPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEYQIKQLVDANERLTSEVSSLKALNERLLSENASLRSEAAARTVAGARGPAESTPRQQEGPPSAIRAARMLMTMCLLSQTSSPTSTPTSISTPSINLQTPSSKKLMQVLQERLKMSQTGSAESVLKELKWWGPQQSTWNPVKVQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_00682111;
80% Identity
-