Basic Information

Insect: Eudonia mercurella
Gene Symbol: -
Assembly: GCA_963082485.1
Location: OY720036.1:7835012-7840357[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00058 0.067 14.9 0.6 1 23 305 328 305 328 0.92

2 12 0.0039 0.45 12.3 2.4 1 19 351 369 351 373 0.90

3 12 3.4e-05 0.0039 18.7 3.4 2 23 379 400 378 400 0.97

4 12 0.00011 0.013 17.1 0.9 1 23 404 427 404 427 0.94

5 12 3.4 3.9e+02 3.0 0.1 1 23 430 452 430 452 0.96

6 12 0.0055 0.63 11.8 0.1 3 23 539 559 538 559 0.96

7 12 2.4 2.7e+02 3.5 0.1 2 23 579 601 578 601 0.93

8 12 1.1e-06 0.00013 23.5 4.1 1 23 607 629 607 629 0.98

9 12 0.0015 0.17 13.6 1.7 2 23 635 656 634 656 0.96

10 12 0.009 1 11.1 4.0 3 21 664 682 662 685 0.93

11 12 3 3.4e+02 3.2 2.4 1 19 693 711 693 712 0.87

12 12 0.028 3.2 9.6 3.7 3 19 725 741 724 746 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00058	0.067	14.9	0.6	1	23	305	328	305	328	0.92
2	12	0.0039	0.45	12.3	2.4	1	19	351	369	351	373	0.90
3	12	3.4e-05	0.0039	18.7	3.4	2	23	379	400	378	400	0.97
4	12	0.00011	0.013	17.1	0.9	1	23	404	427	404	427	0.94
5	12	3.4	3.9e+02	3.0	0.1	1	23	430	452	430	452	0.96
6	12	0.0055	0.63	11.8	0.1	3	23	539	559	538	559	0.96
7	12	2.4	2.7e+02	3.5	0.1	2	23	579	601	578	601	0.93
8	12	1.1e-06	0.00013	23.5	4.1	1	23	607	629	607	629	0.98
9	12	0.0015	0.17	13.6	1.7	2	23	635	656	634	656	0.96
10	12	0.009	1	11.1	4.0	3	21	664	682	662	685	0.93
11	12	3	3.4e+02	3.2	2.4	1	19	693	711	693	712	0.87
12	12	0.028	3.2	9.6	3.7	3	19	725	741	724	746	0.94

Sequence Information

Coding Sequence: ATGGAGCAAGCTAACATTAATTTGGACTCCGAGGTTTTGTACCCGGTGCTGCTCATACCGAAAAAGTGTACCACCCTGGAGATGAGCTGCGAGGTGACAGCTAACGTTTTTATTGATTTGAACATCACTTCACCCGACACTGAAGGCAACGAGATGTGCATATACAACGGTATCTGTAACGTAAAACTGATTGACAGTTATGACGTAAACATACAGCATGTGGAATCGCCTTCGGACAGTGGGACCTCCAGCTTCGAGACCGAAACAGCTCATTCTGACTCCAACCAAATAACTTTTCCGTCCTACAACCAGTCGCAAGTCTGGATAGACCCAGTGAGGAGCCCTCACGTATACAACTCGTACGATGCCACTAAGACTCAGGAGTACTCCATTTGTCACCAGACCCGTTCAGCTCATATCACGTTCGAACAGCACAATACCTACATCACCCAGAACGTTTATAACTACAAGGAGTCTATTCAATACTCGTCTCCGGAAGACTTTGAGCATAAGAAGTTTAGAAAGGTAACACCGTCGGACAATGTTCACCAAAGTTCTGCGGATcaaaacaatttgaatttgtaCGAAGAAGACGAGTTCGAATGCGGTGTTTTCCTTTCGAATTTACCGGAGGAGATTATTAATGAGAAGGAGGCGAAGGATAGAGAGGAGAGGAAGTATATAGGGTTGCAAAGTGAGAATTGGGCGTTGAAACAGCTGATGTCGTCCGATATTCAGTCTGTGTCGAAACAAAGGAAGACTATATTGTTTTTGGGACACGACTCGCATAGCGGACAGACCATACAGAAGATAGCGATCAATGACCCCTCGTTGGTGTGCTCTGGTACGGGGGAGGTAGACCATGAAGTTGTTATTGaGGATTCTTCGTTCTCCAATCCACATCAGAAAAAGTATCAGTGCGACAAATGCAAGCAAATATTCGATCAAATATCTGCCTTCAAGCAGCACATGGTCGGCAACCACAGCTACAGGACCCTAAGGTCTTCCAGCTCCTACGACGCAGACTCATCCACAGTCAGCGAAGTCAAGTTCATGTGCACTGAATGTGGCAAGAGCCTGAAGAATCAAGAGAAATTCGAACAGCACTGCATGGGCCACGGCGACCCAGATGTAGAATGCAATAAGTGCCACAAAGTGTTCGCCTCGAAATTCACCTTACGCACGCACCGTAAGATCCACAACAGAAAGCATTCCTGCAGCTACTGCACTAAAACCTTCGCTGACGTCGAGAACTTGCGCTCGCACGCTGCGAAAATACACTTTATGTTCATGTGTGAAAGTTGTTCTTACGTTGCCGATAAATATTCCGTTTTGAGTTTGCACCAAGAGATTCATAAAGTCCCGGCGTGTGTTAAAGAAGATAGTGATAATGATTTTGGAGAATCCTTGATGGATGGTGACGGCATCAGTGACACTGATATTATAACGCCGTCACCTGAAGGGCACGAATTGAAGTTGGAGCCTGACGCTAGCACCTTCTCTCGGGAAGATGAGATCCAGAAAGCAGATTCTGTTATTGCTAAAGTTATGTCCAACAAGATATTCCTTCTGCATTCCAAAAAGGTTGGGAGACACAGGAGGTACAATAAgGCGTGTGACGTGTGTATGAAAGTGTTCGACCGCGTTGGAGACCTCAAAAGGCATCTCATCGAGCACATAATCCGCAGCACCCTCGCCAAGACACCGGTCAGCAAAAATGGAACCCTCAACATACAGTGCGAGGTCTGCCAAGCCGAAAGCTTCACTATAGTCGACAGGTATAAGGCCCATCTTCGCGAGCACGCCAAACTCACACTCTACAAATGCACCTTCTGCGACAAATCATTTAGCGACTCCTCAAACTTTTCCAAACACAAGAAAATACACGGCACCACCTACCTCCAATGTGACCTTTGCCAAAGGAAATTCAACTCTAAAAAGATGATAACACAGCACATGGAGTATCACAACAAAAACTCGCCGGTTCATTGTCCCTATTGCGATAAGATATTCCATTTCGAGTCGATGCTCAACAAGCATGTAAAATGCGTGCACACTAAAGAGCTGTCGAACAGATTTAGATGCCGCTTTTGCCACGAGTACTTTAAGACGTTGAAGGAGAAATGGGATCATGAATGGAGGATTCATAACGTTAGGAAAATGATCGTCGACTGTTTGATATGCGGCTGCAAGTTTAGGAAATACTCGGAGTTGAAAAGACATTGTATAGATGCCCACGATATGGAAATACCGCCGGCAAAGAAACTGTTGAAGAAGAAAAGGTTTAAGTACTAA
Protein Sequence: MEQANINLDSEVLYPVLLIPKKCTTLEMSCEVTANVFIDLNITSPDTEGNEMCIYNGICNVKLIDSYDVNIQHVESPSDSGTSSFETETAHSDSNQITFPSYNQSQVWIDPVRSPHVYNSYDATKTQEYSICHQTRSAHITFEQHNTYITQNVYNYKESIQYSSPEDFEHKKFRKVTPSDNVHQSSADQNNLNLYEEDEFECGVFLSNLPEEIINEKEAKDREERKYIGLQSENWALKQLMSSDIQSVSKQRKTILFLGHDSHSGQTIQKIAINDPSLVCSGTGEVDHEVVIEDSSFSNPHQKKYQCDKCKQIFDQISAFKQHMVGNHSYRTLRSSSSYDADSSTVSEVKFMCTECGKSLKNQEKFEQHCMGHGDPDVECNKCHKVFASKFTLRTHRKIHNRKHSCSYCTKTFADVENLRSHAAKIHFMFMCESCSYVADKYSVLSLHQEIHKVPACVKEDSDNDFGESLMDGDGISDTDIITPSPEGHELKLEPDASTFSREDEIQKADSVIAKVMSNKIFLLHSKKVGRHRRYNKACDVCMKVFDRVGDLKRHLIEHIIRSTLAKTPVSKNGTLNIQCEVCQAESFTIVDRYKAHLREHAKLTLYKCTFCDKSFSDSSNFSKHKKIHGTTYLQCDLCQRKFNSKKMITQHMEYHNKNSPVHCPYCDKIFHFESMLNKHVKCVHTKELSNRFRCRFCHEYFKTLKEKWDHEWRIHNVRKMIVDCLICGCKFRKYSELKRHCIDAHDMEIPPAKKLLKKKRFKY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00448393;
90% Identity: iTF_01335343;
80% Identity: -