Emer036598.1
Basic Information
- Insect
- Eudonia mercurella
- Gene Symbol
- ZFX
- Assembly
- GCA_963082485.1
- Location
- OY720049.1:11374420-11380525[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 8.2e-05 0.0094 17.5 0.3 2 21 117 136 116 137 0.94 2 16 9.3 1.1e+03 1.6 0.2 2 13 142 152 142 163 0.71 3 16 0.37 42 6.1 0.1 1 23 168 191 168 191 0.91 4 16 0.0016 0.18 13.5 0.6 1 23 196 218 196 218 0.97 5 16 9.3 1.1e+03 1.6 8.1 1 21 221 241 221 242 0.88 6 16 0.00027 0.031 15.9 1.1 1 23 255 278 255 278 0.95 7 16 7.9e-05 0.009 17.6 1.0 1 23 284 306 284 306 0.98 8 16 0.88 1e+02 4.9 0.7 1 23 340 363 340 363 0.87 9 16 0.00038 0.044 15.4 1.0 2 21 491 510 490 511 0.93 10 16 8.6e-05 0.0099 17.5 1.0 2 23 573 594 572 594 0.97 11 16 0.035 4 9.3 3.4 2 21 598 617 598 618 0.93 12 16 0.0013 0.15 13.7 0.4 1 23 644 667 644 667 0.92 13 16 0.00011 0.012 17.2 0.8 1 23 673 695 673 695 0.96 14 16 0.35 40 6.1 0.1 3 23 703 723 701 723 0.97 15 16 0.0026 0.3 12.8 1.1 1 23 729 752 729 752 0.94 16 16 0.00085 0.097 14.4 0.6 2 23 759 781 758 781 0.95
Sequence Information
- Coding Sequence
- ATGACGTGGTTTCAGGTGGAGTTCGATGGGGACTTGCCACAAGGCCTCTGCCGGTCGTGCGCAGAGAGCGCTCTCGCCGCGATAAACTTCAGGCAACTTTGCAAGGAGTCCTCCAACCAGTGGACGCAGGCCATCTCCTTCATGTCCAATATAGAGTTCCCGGCGGAGGAAAATAAAGTGTATTACATATTCTATAACACACACGAAGATATCATTATCAATGATCAAGTAGAAAAGGCTGTGAAGAAAGATATGACGTTGCAAAGTCGTAATTCGAAGTTGCAAGACGATTCTGATGACCAAATGGTGGCGAAGTCGGAAAGGAAGAAACGCTCTTTGTGGTTGTGGCAATGCCCCGACTGTAGCAAGAAGTTTTCTGTCGCCGTCCACTTAAACTCCCATTTAAAGAACACCAAGAAAAGGGTATGCAATGAATGTGGTTTAGTGGTATCAAAAACGAAGTTTCCTCAACACTTATTCATGGCTCACGAGAAGATCGTGTATCCTTGCGGCACATGCTACCAGCTGTTCGAAGATGAGATGTCTTTGAACATGCATATAGGCTTAACGCACGGCAAAAGTTCGCATCAGTGCAGAGTCTGCGGCAACGGTTACAGCAACGAGAGAGCTCTGAGCGCGCACATGTACAGCCACTCCTTGTTCTACTGCACGCATTGTCGTCGCAGTTTCGAGAATCGCAACTGCCATGTACACCACCAGCGTCAATGCCAAACGGAGATGCCTCAACCTGAATCGAGCGAGTATATATGCGACCACTGTGGCAATTCCTACACGAAAAAACCTTCGTTACGCATTCATATAATACAGAAGCATTTGAATATACTTCCCTATGTCTGTGAGACTTGTGGCAAGCGTACGTCGACTATAGCTCACTTGCGTTCACACGAAAAGGTGCATACGCTAGTTAGAAAGACGTTTCAATGTCATTGTGGTGCCAAAATGCGCACTGAGTTAGGTTATCAATTACACTTGCGCATACACACTGGTGAGAGGCCTTACGAATGTAAGGACTGCGGGGACAAGTTTCTGTCCGCTTCTAGAAGGCTGGACCATATCAAACGCAGGCATAGGTCCGCTAAAGACATGCCGCATGGCTGTACCAAGTGCTCCGCGCGATTTATCGACGAAGAGAAAAACTGTCCAAAAGGAGTATGTGTGGCCTGCACGACAAGCGCTATCGCCGCCCACGAGTTCCGCGTCTTCGTCCGCAACACGCAGAAGACCTGGTTGAAAGCCATCGCTGCTATAAGCGATGTGTCCAAGGCATATGCCCCTTCAGTGAAATCCCTCTGCACATTCATAAAACCAGACTTCCAAGTACACACAGTCAAAGATTATGCCAGCGGCAGCTCAAAAGCGATTCTGAACAGGCTCAAGCAACGTTTGACAAAGCAGGATTACAAAGAATCCGAAAGGAAAACCAGAACTCCTCGGACTGGACCTGCTTGCAATTGCCCTGATTGTGGGAAAATCTTCTTCAGCCCGTACTTTTTACGGTTGCATTTGAAAAACAGTGGCACCAAAGAGGCTTGCTTGCACTGCGGCGCGGTGCTGCTGCGAGGATTAGAAATGAAGGATCACCTGTCCACCGTTCACGGTGAAAAGCTGCTCCTTTGCGAACAGTGCCCGATGCTGTTGGGTAACGAAATCCGAATGCAGAAGCATGTGGAGAAAGCGCATACCGATGGCGCTTCCACTTGTAACGATTGCGGACGCTGTTTCCCGGGGCAGACCTCTTTGGAAGTGCATTCGCAAATGCACGCCGTTCGAACTTGCAGGATGTGTGGTCAACAGTTCACGAACCGCAGTTGCTACAGAGACCACAGATCCAAGTGTGAGCCCAACGCTCGTCCGGACGTCCAACTAATGCCGCGCAACAAACGATCGAACGTTCGAgatcccgcgacctttacctgCGATTACTGTAACAAATCTTACCTCTCGCGGCCTCAACTCAAGAACCATATAGTGTGGATCCATATGGATGTTAGACCTCATCAGTGTCAGTGGTGCGGAAAAAGGTTTTACACGCCGTCGCGTTTGGCCGAGCATACCGTAGTGCACACGCGGGAGAGGAACTTCGGATGCGACATTTGTGGCGCCAAATTGGTTACCAAGATGGCCGCCATTTATCATAGGCGAAGGCATACAGGTGAAAAGCCTTATGAGTGTGAAGACTGTGGTGAATGTTTTATATCGGCGTCGAGGAGGTCGGAGCACGCGAAACGTAGACACGGCAAGGGCCCGAAGATTGTGTGTATGCAATGCCCCGCTACTTTTGTGAGGGGGCACGAGCTTAAAAGACATATGGAAAAGTCGCATAGGAGTCAGGGACAGAATCTGTCGAATGTGGTGCAAGTTGAAGGGTAA
- Protein Sequence
- MTWFQVEFDGDLPQGLCRSCAESALAAINFRQLCKESSNQWTQAISFMSNIEFPAEENKVYYIFYNTHEDIIINDQVEKAVKKDMTLQSRNSKLQDDSDDQMVAKSERKKRSLWLWQCPDCSKKFSVAVHLNSHLKNTKKRVCNECGLVVSKTKFPQHLFMAHEKIVYPCGTCYQLFEDEMSLNMHIGLTHGKSSHQCRVCGNGYSNERALSAHMYSHSLFYCTHCRRSFENRNCHVHHQRQCQTEMPQPESSEYICDHCGNSYTKKPSLRIHIIQKHLNILPYVCETCGKRTSTIAHLRSHEKVHTLVRKTFQCHCGAKMRTELGYQLHLRIHTGERPYECKDCGDKFLSASRRLDHIKRRHRSAKDMPHGCTKCSARFIDEEKNCPKGVCVACTTSAIAAHEFRVFVRNTQKTWLKAIAAISDVSKAYAPSVKSLCTFIKPDFQVHTVKDYASGSSKAILNRLKQRLTKQDYKESERKTRTPRTGPACNCPDCGKIFFSPYFLRLHLKNSGTKEACLHCGAVLLRGLEMKDHLSTVHGEKLLLCEQCPMLLGNEIRMQKHVEKAHTDGASTCNDCGRCFPGQTSLEVHSQMHAVRTCRMCGQQFTNRSCYRDHRSKCEPNARPDVQLMPRNKRSNVRDPATFTCDYCNKSYLSRPQLKNHIVWIHMDVRPHQCQWCGKRFYTPSRLAEHTVVHTRERNFGCDICGAKLVTKMAAIYHRRRHTGEKPYECEDCGECFISASRRSEHAKRRHGKGPKIVCMQCPATFVRGHELKRHMEKSHRSQGQNLSNVVQVEG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00683599;
- 90% Identity
- iTF_00683599;
- 80% Identity
- -