Basic Information

Insect: Eudonia mercurella
Gene Symbol: -
Assembly: GCA_963082485.1
Location: OY720033.1:2602679-2615127[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 5.2 6e+02 2.4 0.1 1 23 83 106 83 106 0.94

2 20 0.54 62 5.5 0.5 3 23 136 157 134 157 0.86

3 20 0.41 47 5.9 3.5 1 23 207 230 207 231 0.94

4 20 0.5 58 5.6 1.8 2 23 388 410 387 410 0.93

5 20 0.31 36 6.3 0.1 1 20 418 437 418 439 0.93

6 20 0.0017 0.2 13.4 0.6 2 23 449 470 448 470 0.95

7 20 1.7 2e+02 3.9 0.9 1 23 486 509 486 509 0.89

8 20 0.0014 0.16 13.7 0.7 1 23 518 541 518 541 0.95

9 20 1.6 1.9e+02 4.0 1.1 1 23 552 575 552 575 0.94

10 20 2.3 2.7e+02 3.5 0.2 8 23 591 607 588 607 0.90

11 20 0.12 14 7.6 0.7 2 23 619 641 618 641 0.92

12 20 6.7e-05 0.0077 17.8 2.3 1 23 675 697 675 697 0.97

13 20 6.3e-06 0.00072 21.1 1.0 1 23 704 726 704 726 0.98

14 20 1.8e-05 0.0021 19.6 2.9 1 23 731 753 731 753 0.96

15 20 0.015 1.7 10.5 2.6 3 23 761 781 759 781 0.97

16 20 2e-06 0.00023 22.6 1.4 1 23 787 809 787 809 0.98

17 20 0.00015 0.018 16.7 1.6 2 23 816 837 816 837 0.98

18 20 0.00072 0.083 14.6 0.2 2 23 845 867 844 867 0.96

19 20 7.7e-05 0.0088 17.6 0.1 1 23 872 894 872 894 0.98

20 20 5e-05 0.0057 18.2 1.7 1 23 900 923 900 923 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	5.2	6e+02	2.4	0.1	1	23	83	106	83	106	0.94
2	20	0.54	62	5.5	0.5	3	23	136	157	134	157	0.86
3	20	0.41	47	5.9	3.5	1	23	207	230	207	231	0.94
4	20	0.5	58	5.6	1.8	2	23	388	410	387	410	0.93
5	20	0.31	36	6.3	0.1	1	20	418	437	418	439	0.93
6	20	0.0017	0.2	13.4	0.6	2	23	449	470	448	470	0.95
7	20	1.7	2e+02	3.9	0.9	1	23	486	509	486	509	0.89
8	20	0.0014	0.16	13.7	0.7	1	23	518	541	518	541	0.95
9	20	1.6	1.9e+02	4.0	1.1	1	23	552	575	552	575	0.94
10	20	2.3	2.7e+02	3.5	0.2	8	23	591	607	588	607	0.90
11	20	0.12	14	7.6	0.7	2	23	619	641	618	641	0.92
12	20	6.7e-05	0.0077	17.8	2.3	1	23	675	697	675	697	0.97
13	20	6.3e-06	0.00072	21.1	1.0	1	23	704	726	704	726	0.98
14	20	1.8e-05	0.0021	19.6	2.9	1	23	731	753	731	753	0.96
15	20	0.015	1.7	10.5	2.6	3	23	761	781	759	781	0.97
16	20	2e-06	0.00023	22.6	1.4	1	23	787	809	787	809	0.98
17	20	0.00015	0.018	16.7	1.6	2	23	816	837	816	837	0.98
18	20	0.00072	0.083	14.6	0.2	2	23	845	867	844	867	0.96
19	20	7.7e-05	0.0088	17.6	0.1	1	23	872	894	872	894	0.98
20	20	5e-05	0.0057	18.2	1.7	1	23	900	923	900	923	0.98

Sequence Information

Coding Sequence: ATGACTTCCGACGATTCAGACGACGAGCCGCTGTCTATATTGGCGGCGACTAAACGGCTTAGTTCCGAGAAATTCGAAATCAAGAAAGTCAAAACCAGCGAtgtgaagaaaaagaaaaaaaagccgACGAATTGCCAAAAGTTGTCTTTATCCATTAAATTATGTTCAAATGATAACGATATCAAAGTGTTGGAGCGACCTGCCGACGTTTGGCTTTATATGAAAGATTTAAACCCTGCCGGACCATATAGTTGCTTACTATGCCCTGAATGGTTTATAAATCGGACTAAAATCATGGTACATTACATTATAAATCACAAAATAGCCTTCTGTGGCATTTGCAGATATTTTATACAAGATAAAGAAGCATGGGATAATCATATGATGTTCCATTCCCCATGGGCATGTTCTCAATGCCGTGAAAGCTTCCCAACAGAATCTGAAATGAGATGCCACCTAAGCGCAGTGCATAACCTGGTGCACTGTCGACTATGCCACTTCAGAGTATCAGATGATGAACAGTACAACAATCACCTATTTCAAAAGCATAATATTACAAACATGACAAGCAAAACAGATGAAACTCTTTGGGTTAATGAATATGATGGCAGTCCCAAGTTTTACTGTGTATTATGCAAAAAATCAACTACCTTGTCTATAAATTTTTTCAATCACTACATGGGGTATCACCATTTCACACTGAAATGTTTCTCAACTATTATTTCTGGAAGAGATATACCCTTCACTGTGGATGGAGCTGATATTAGCTCTCAGTTTGTAGATGGTGAGCTAAGAAGTCAAATGAAGCTTGGTTACGTAGATTTAGAGGATAAAAACCAAGAACTTCAagagtcaaatgacacaatctCAAGCATGGTTAACGTTCTTATAGaaccagaaataaaacaagagcTTTTAACTGATAACGAAGAATCAAAAGAAGGTCAAGAAGATGAGcctgacaaaaataaaatagataatgCCCCTGTCACCTATCATGGTGATGAAGACTTTGATGTTACTGCAATAGAACTAATTGTACTGcacaaatgtttttataattacataGAGAAAACAATAAGCCAAATTAATTCCAAAGTGTTACCTGTAGAATCTACGATTCACTATGAAAGTGCAAAGTTTGATGTTTTGATGGAAATCCACTGTTCATTGTGTAAAAACAAATTTGATACATTGCAAAGTTATACCGCACACCTGGGGAAAATGCATTTGGTGAAAGCGGAACCGATATTTACCTGTAGAGTATGTGCAACAACATTTGAGACTATGCAAGAACTAGAGTACCATGCAAATGAAGAAATGAAAGAATTTGAAGATTTATGGATTTGTCAGTTCTGTGAGAAAGAGTTTGATAACAGAGAGGAGACAAGACGCCATATGAATGAACACTGGAACGTTATGGAATATGACAACTGTTTCAGTCCACATTTAGGTTTCAAGTGTCAGTATTGCCCGACTTTGTTTTGGAATGAGACAGATAGAAAGACTCATCAAGTCAGAGTTCATTACGACAAGCACATAGGAGATTATTATAGATGTGTAATTTGTTTAGAGGTATTTAGTGATAAGgctTGGTTTACACACCACTATTTAAACGCCCACCAAAGTGGACCGGACACCACAAAATTCCTTTTCAAGTGTTGCCTGTGCAGTTTAGTGCTTCCAACAATCAGTGAAATGAGAAGCCATTTTAAAGCTGATCATCCACTAGCCATAAAGTACTTCTGCTCATTAGGACCATGCACATACAAGCCGCTTAGCAACAAGAAGTCATTCAAAATTCATGTTAGGACGGTCCACAACTCGGACTCGTCCCAGCACGAGCACAGCAGTACGTGCGTGCTTTGCGGGCGCGACTTCTCGTCGGCGCGCGCGTGCAACACGCACATGGCGCAGGTGCACGGCCCCGGCAAGTTCAAGTGCAAGCTGTGCCGCGAGCTGATGCACACCAGCGACGAGAGGAAACTTCACTACCTGCTGCGCCACCCCGGGCGGCACCCGTTCTCGTGCACAGAGTGCGGCAAGTCGTTCCAATACAAGTCCTCCCTCTACATGCACAAGCAGGAGCACTTGCCGAACAAGCAGAGCTTCACCTGCACCTACTGTGGGAAGATTTTCGCGAAAAAGGATTCGTTCCGCGAACACGTCCAAATACATGAAGGGCCCCGCCACGCGTGCTCGTACTGCCCCAAGCGGTTCGTGCAACGCTCGAACATGCTGCGGCACGAACGAAGGCATACGGGCGAGCGGCCTTATGGGTGCCAACACTGTCCACGAACGTTCGCCGACAAGGGAGCTTGCACTTCACATGCAAGgACCCACACGAAAGACAGATCCTACGCGTGCCTATACTGCGGACAGACGTTCGTGCAGAAATCTAAGTTGACTTATCACATCCGGAAGCATACGGGAGAGAATTTGGAGACGTGCCCCGTTTGCTCCAAGCTGTTCACGAGCGCGTGCTCCCTGCGCGAGCACATGAAGATCCACGACGTGAAGAAGGACACGGTACCTTGCCCTCTGTGCGGGCGCAAGTACCAAGACGAGCGTTACATGCTCCGCCATCTTCGCACGATCCACACGAGCGCGCGGTTCACGTGCCCGCTGTGCGGCAAAGCGCTTACCTCGGCGGCGGGGCTGCGGCACCACGTGGTCACCCACAGTGACCTCAACATGTTCCGCTGCAAACTCTGCCCGAAGTCTTACGCCGTGAAGCGTACTCTCGTCAAGCATTTGCGCAGGCGCCACTACTTAAAAGGGGTCGATGCAGTACTAAAGGACTTCTTCCAGACCCTAGACCCTCGCGACTGCAACTTAGGCCTGGATGACGAGATCATGGACGACATATTCGGCCCTCCCAAGAAAAAGACCAATGATGGTTTACTAGCAAACTTTGTGACTTTAAAGAAATTCGCCAAGAGCAGGAAGAATGAAAATGAAGATGGTGATGCAGCGTCAGATGATAGTGATAgtaaggatgatgatgatggtgatggcgatggcgatggtgatggtgatggcgatggcgatggtgatggtgatggcgatggcgatgttGATGgtgatggcgatggcgatgatgatgaggagAAAGATGAAGATCAGTTAATGTTGGAGTTGGAGCCGACTGATTTCGTCAGCGTCAAGATTGAACCGATGGACCCTGATGAAGAAGAGGAGGTTGTGTGA
Protein Sequence: MTSDDSDDEPLSILAATKRLSSEKFEIKKVKTSDVKKKKKKPTNCQKLSLSIKLCSNDNDIKVLERPADVWLYMKDLNPAGPYSCLLCPEWFINRTKIMVHYIINHKIAFCGICRYFIQDKEAWDNHMMFHSPWACSQCRESFPTESEMRCHLSAVHNLVHCRLCHFRVSDDEQYNNHLFQKHNITNMTSKTDETLWVNEYDGSPKFYCVLCKKSTTLSINFFNHYMGYHHFTLKCFSTIISGRDIPFTVDGADISSQFVDGELRSQMKLGYVDLEDKNQELQESNDTISSMVNVLIEPEIKQELLTDNEESKEGQEDEPDKNKIDNAPVTYHGDEDFDVTAIELIVLHKCFYNYIEKTISQINSKVLPVESTIHYESAKFDVLMEIHCSLCKNKFDTLQSYTAHLGKMHLVKAEPIFTCRVCATTFETMQELEYHANEEMKEFEDLWICQFCEKEFDNREETRRHMNEHWNVMEYDNCFSPHLGFKCQYCPTLFWNETDRKTHQVRVHYDKHIGDYYRCVICLEVFSDKAWFTHHYLNAHQSGPDTTKFLFKCCLCSLVLPTISEMRSHFKADHPLAIKYFCSLGPCTYKPLSNKKSFKIHVRTVHNSDSSQHEHSSTCVLCGRDFSSARACNTHMAQVHGPGKFKCKLCRELMHTSDERKLHYLLRHPGRHPFSCTECGKSFQYKSSLYMHKQEHLPNKQSFTCTYCGKIFAKKDSFREHVQIHEGPRHACSYCPKRFVQRSNMLRHERRHTGERPYGCQHCPRTFADKGACTSHARTHTKDRSYACLYCGQTFVQKSKLTYHIRKHTGENLETCPVCSKLFTSACSLREHMKIHDVKKDTVPCPLCGRKYQDERYMLRHLRTIHTSARFTCPLCGKALTSAAGLRHHVVTHSDLNMFRCKLCPKSYAVKRTLVKHLRRRHYLKGVDAVLKDFFQTLDPRDCNLGLDDEIMDDIFGPPKKKTNDGLLANFVTLKKFAKSRKNENEDGDAASDDSDSKDDDDGDGDGDGDGDGDGDGDGDGDGDVDGDGDGDDDEEKDEDQLMLELEPTDFVSVKIEPMDPDEEEEVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00683590;
90% Identity: iTF_00683590;
80% Identity: -