Emer036030.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eudonia mercurella
Gene Symbol
-
Assembly
GCA_963082485.1
Location
OY720049.1:4386506-4389506[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.0005 0.057 15.1 0.6 1 23 71 94 71 94 0.95
2 16 0.0027 0.31 12.8 1.0 1 23 167 189 167 189 0.99
3 16 0.0035 0.4 12.4 0.2 1 23 193 215 193 215 0.95
4 16 0.018 2 10.2 0.2 2 23 221 243 220 243 0.93
5 16 0.056 6.4 8.6 4.5 1 23 249 272 249 272 0.95
6 16 3.6e-05 0.0042 18.7 0.2 1 23 279 302 279 302 0.98
7 16 1.8e-05 0.0021 19.6 0.9 1 23 308 330 308 330 0.96
8 16 0.38 43 6.0 0.2 1 23 468 491 468 491 0.95
9 16 1.2 1.3e+02 4.5 1.4 3 21 517 535 515 538 0.93
10 16 0.21 24 6.8 0.1 1 23 562 584 562 584 0.96
11 16 0.00059 0.068 14.9 0.2 1 23 588 610 588 610 0.98
12 16 0.00085 0.098 14.3 0.5 1 23 615 638 615 638 0.95
13 16 0.0067 0.77 11.5 0.4 2 23 645 667 645 667 0.93
14 16 0.026 3 9.7 6.3 1 23 674 697 674 697 0.96
15 16 8.9e-05 0.01 17.4 4.9 2 23 704 725 703 725 0.96
16 16 3e-05 0.0034 18.9 0.6 1 23 731 753 731 753 0.99

Sequence Information

Coding Sequence
ATGTTATTTTCTCATTTTATAGGTGATGACTCTAACTCAACCGAAAGAAATAAAGAAGTAGAACAGAATGAGAGTCAGAACCGAACAAGTGTGAAGCTTACAACCGAGCAAGCGAAGACCCTGAACGACGAATTGCGAGCTAGAAAGAAAAACGTCATCGCTATATTAGAAAACTCCAAGTTATGCCCCTTTAGATGGCTGAAGAATTTGTACATATGTTTCTATTGCGAACAACAGTTTTCAGACCCTGCTGCTTTGAGGAGTCATCATGGAACCGAACATAAGTCTCAGACGTCGACAGAAGTGAAAGAAGCATTATCCAAGCTGAAGAAATATGAATTAGTCAAAGTCGACATAACTGATGTTGGCTGCAAGCTTTGCGAAGACCTCATCACAGATTTGAAGACCCTCAAAAGCCATCTGCTAATGAAGCACATGAAAAACATTGATCCTAAATCTGGCGATGGTATCCTCCCGTTTAGAGTGACCCGACACGAGTATAAGTGCGCAATATGTGACGACACATACGCAGAATTTAAATCTTTGAACCATCACATGAATGttcattttcaaaatttcataTGTGAACAATGCGGCACTGGTTTTATGACACCAGAGAGGTTGAGGACGCACGCATTCTCGCACGAGCAAGGCTCTTTACCCTGCGAAAGCTGTGACAAAGTGTTTAGATCGACCAACGCGAAAAACGAACATTATGCTACTGTTCATATGCGAGTGAAAAGGCATAGGTGCCCACATTGCCCGGACACTTTTAGGAACTACTTTCAGAGGAATAAGCACATATCAAATATCCATGGGATAAAGCTGAAAGAATTTAAATGCACGATGTGTCCGAAGGTGTTCACGTTGAGCGGAAAGTTAGGTGTCCACGTAAGGACAGTACATTTGAAGGTTAAGCGTCACGCCTGTGATGTTTGTGAATGGAAGTTTTACTCCAAATCGGAATTGAAGGAACATATGATCCGTCATGGTGGCGAAAGGAAGTACCAATGCAATATATGGACCGACCAGACAGTATTAGCAACGGATTTAGTGCAGCCGAAAAGGATCGTGCCTCTATTTCAAGTTGAATACGACCGCAGCCTTTGTAGGCCTCTGGGGACGATCACCGACTTCAGTAAACTAACGCTTACGAATCGCAAGCAACAACCAAGAATCAGGGTTGCAACCAACCTGATGCCCAATTTTACACCGTCTAGAAGTCCTTCTCCACTACCTGTGGAACTTAGATCACCATCTCCTCTCAGAGACAGTTTGCCACCCCCCGATAAGACACGACCAGCCCCTAAATTAACTGTCAAAAATCCAGATCTTAGACAAAATGCTCTGACCGTCTTCGAGTTTTCCACCGTTTACCCATTCATTTATGGCAACAACAAATTCAAGTGTTTCATTTGCGCCCAACCGTTTTTAGAAATTTCGTTACTCAGAATGCATATGAACGAAACTCACATGTTCACATCGTTAAAAAGGTTGGTCAATAACAGAAGGGAGAACATCCTCAAAGTAGATGTTACCAACATCAACTGTAAAATATGTTACAGGAACCTAAATAGTTTACCTGAGTTAAAAATGCATCTGAAATGCGATCATCAAAAGCCGATAGACCCAGAATTGAAGGACAACATAATACCGTTTAAATTAGAAGCCACTGAGCTTGGCTATAAGTGTGTAATTTGCGAGCAGAACTTCATCAAAATCAGAATATTGGTCATACATATGAGCGTGCACTTCAACAACTACAGTTGCGAAGTGTGCGGCTCTGGATTCATGACATTGCGTCTGCTCAAAAAGCATTTGGAAGTCCACGAGAGTGGCAACTTCGCGTGCGATCGTTGCACCAAAGTGTTCAGTACGGCGTACAAAAGAAATCTGCATATCAGAGGTGTGCATATGAAGCAATATCCTCGCCGATGTCCAATGTGTCCGGAAAGGTTTAACTCTAACTACAAAAGGACAATACACCTTCAAGACGTGCACAACCAATCTACTAGAGTGCACAAATGTGAAACTTGTGGACGCGCTTTCAATTTGAAGTATCATTTGATATGTCACACCAGATCGGTGCATTTGCAGGAGAGAAATCAGCAGTGCGATGTTTGCCATCAGAGGTTTTGTAATAAGGAAACCCTGAAAAGGCACATGGTTATACACACGGGCGAGAAAAACTACAAATGTGAAGTTTGCGGTATGGCGTTTTTGAGAAGGAAAAACTTGAAAGATCATTTGCGGCTGCACGAAATGGGATGA
Protein Sequence
MLFSHFIGDDSNSTERNKEVEQNESQNRTSVKLTTEQAKTLNDELRARKKNVIAILENSKLCPFRWLKNLYICFYCEQQFSDPAALRSHHGTEHKSQTSTEVKEALSKLKKYELVKVDITDVGCKLCEDLITDLKTLKSHLLMKHMKNIDPKSGDGILPFRVTRHEYKCAICDDTYAEFKSLNHHMNVHFQNFICEQCGTGFMTPERLRTHAFSHEQGSLPCESCDKVFRSTNAKNEHYATVHMRVKRHRCPHCPDTFRNYFQRNKHISNIHGIKLKEFKCTMCPKVFTLSGKLGVHVRTVHLKVKRHACDVCEWKFYSKSELKEHMIRHGGERKYQCNIWTDQTVLATDLVQPKRIVPLFQVEYDRSLCRPLGTITDFSKLTLTNRKQQPRIRVATNLMPNFTPSRSPSPLPVELRSPSPLRDSLPPPDKTRPAPKLTVKNPDLRQNALTVFEFSTVYPFIYGNNKFKCFICAQPFLEISLLRMHMNETHMFTSLKRLVNNRRENILKVDVTNINCKICYRNLNSLPELKMHLKCDHQKPIDPELKDNIIPFKLEATELGYKCVICEQNFIKIRILVIHMSVHFNNYSCEVCGSGFMTLRLLKKHLEVHESGNFACDRCTKVFSTAYKRNLHIRGVHMKQYPRRCPMCPERFNSNYKRTIHLQDVHNQSTRVHKCETCGRAFNLKYHLICHTRSVHLQERNQQCDVCHQRFCNKETLKRHMVIHTGEKNYKCEVCGMAFLRRKNLKDHLRLHEMG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-