Emer015487.4
Basic Information
- Insect
- Eudonia mercurella
- Gene Symbol
- -
- Assembly
- GCA_963082485.1
- Location
- OY720029.1:10061289-10070016[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.89 7.3e+02 1.5 0.1 18 26 58 66 52 72 0.88 2 14 8.2 6.7e+03 -1.6 0.0 17 27 85 95 80 102 0.81 3 14 0.049 40 5.5 2.0 6 30 116 140 115 148 0.72 4 14 0.0098 8.1 7.8 2.2 6 38 144 176 140 177 0.75 5 14 0.042 35 5.7 3.7 5 34 171 196 169 211 0.81 6 14 0.0085 7 8.0 6.6 18 41 211 231 196 234 0.78 7 14 0.018 15 6.9 1.0 14 32 235 254 231 261 0.76 8 14 0.031 25 6.2 3.0 6 33 252 283 250 289 0.72 9 14 0.03 25 6.2 4.0 5 38 283 316 279 317 0.78 10 14 0.0014 1.1 10.5 0.6 5 38 311 344 309 350 0.85 11 14 0.065 53 5.1 4.9 7 38 341 372 337 378 0.81 12 14 0.054 44 5.4 6.3 17 38 378 400 368 406 0.84 13 14 0.17 1.4e+02 3.8 0.2 17 30 406 420 401 429 0.73 14 14 0.32 2.7e+02 2.9 2.5 19 39 436 453 421 461 0.76
Sequence Information
- Coding Sequence
- ATGTATAAAGTAAATGTTGAAGACTTATCACAGCTGCTGGCTTACCATGAAGTATTTGGAAAACTCAACACCGAAGGACAGCCGCAAACAAAGcaaGTTATAAATGAGGTGGAAGTGGAGGCAGGCACGAGCGCGGCCATGTCTGAAGCGGAGTCGTCACCAGGCCATCATTCTTGTGACATCTGTGGAAAGATATTCCAGTTTCGCTACCAACTAATTGTTCATAGACGATATCACGGTGAGAGTAAACCATTCACGTGTCAAGTATGTGGTTCAGCTTTCGCAAATCCTGTTGAATTATCAAGACACGGAAAGTGTCATCTTGCTGGAGACCCATCGGAGCGACACGCCAAGAGATTGACGCAAGACAAACCGTACGCGTGCACCAATTGCCACAAGACGTTCTCGCGCAAGGAACACCTGGACAACCATGTGCGCAGCCACACGGGCGAAACTCCATACAGATGCGAGTTTTGCGCGAAAACGTTTACTCGCAAAGAGCACATGGTCAACCACGTGCGCAAGCACACGGGCGAGACGCCGCACCGCTGCGAGATATGCAAGAAGAGCTTCACTAGGAAGGAGCACTTCATGAACCACGTTATGTGGCACACCGGTGAAACGCCCCACCATTGTCAAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAATGAACCATATGAGGTCGCATACTAATGATACGCCGTTTCGATGCGAACTGTGCGGCAAGTCGTTCACCAGAAAGGAACACTTCACCAATCACATATTATGGCACACGGGTGAGACGCCGCACCGTTGCGACTTCTGTTCCAAGACGTTCACACGCAAGGAGCATTTGTTGAACCACGTCCGCCAGCACACGGGCGAGTCGCCGCACCGCTGCAACTTCTGCTCGAAGTCGTTCACGCGCCGGGAGCATCTCGTCAACCATGTGCGACAGCATACGGGCGAGACGCCCTTCCAGTGCGGGTATTGCCCCAAAGCGTTTACACGGAAGGACCATTTAGTGAACCACGTCCGCCAACATACCGGCGAGTCGCCCCACAAGTGCTCGTTCTGCACCAAATCGTTCACGCGCAAGGAACACCTCACCAACCACGTGCGGCAGCACACCGGCGAGTCGCCGCACCGCTGCAGCTACTGCTCCAAGTCTTTCACCAGGAAGGAGCATCTCACCAACCACATCAGACAGCATACGGGTGAAACGCCGCACAAATGCACGTTCTGCCCGCGCGCGTTCTCGCGCAAGGAGCACCTCAACAACCACGTGCGCCAGCATACCGGCGACATGCCCTACGGGTGCACGTACTGCACCAAGATGTTCAACAGGAAGGAGCATCTCGTCAATCATATCAGGTATTTACACGGCACTGATACGAGCATACACAGACGGAACTATGTGAACATGCGTGTCAAAAGTTGTTATAAAAGTTTATCTTCTTTCATTTAA
- Protein Sequence
- MYKVNVEDLSQLLAYHEVFGKLNTEGQPQTKQVINEVEVEAGTSAAMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPSERHAKRLTQDKPYACTNCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLMNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCSYCSKSFTRKEHLTNHIRQHTGETPHKCTFCPRAFSRKEHLNNHVRQHTGDMPYGCTYCTKMFNRKEHLVNHIRYLHGTDTSIHRRNYVNMRVKSCYKSLSSFI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -