Emer035884.1
Basic Information
- Insect
- Eudonia mercurella
- Gene Symbol
- -
- Assembly
- GCA_963082485.1
- Location
- OY720049.1:3575225-3584605[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-09 2.5e-06 28.3 0.0 1 33 188 220 188 232 0.90
Sequence Information
- Coding Sequence
- ATGGAATCATCAGCGAGCCCGTCGAAAAGTGATATTAACATGTTTTTTGGGCGATGCAAATGCTGCCTCGAATATGGTTACATGAAAGATATATGGTCCGAATACTATTGGGAAGGGATACCCGAAATTTACGGAGAAATGTTGATGGAGACCTTTTCAGTCACTTGGGATTCTGCTGACGATGCTAGAGAATATATTTGCGAGGGGTGCGTGATAAGACTGAGGGAcgcttttaactttaaaaaggaTATGCTGGCTTCCGAGAAACTTATGGATGAAGATATTGATGAATTCGAGAATGATTCATTCAAAATTGAAGTCATCGATGACTTTGAGGGAAGTGAGGAGAACATGAATGAAGAGGACACAAAAAGGGATGAAAAGCCAAGTGCGAGCGAGACGGAGTACTACGAAGTCGAGTACTTGGAGGATGAGATAGAAATAAAAGATGAACCCAGAGAGGCGAAGACAACGAATCCGGAAGCCAAGCAACAACAGGAAATATGCAAATGGCCTACCAGAAGAAGGCGGGGCGGTTATATGAGAACCTACAAGAACTACACGCCTGACGACTTGAGATTGTGCCTCGAAGCGGTGAGGAGCAGAGAGATGTCAGTGTCTGAAGCGAGCAGACTCTACAATGTGCCCAGGAAGACGGTCGCGGCCAAACTCATCGAGAAACCGAAGATGAAACGGTTGCCAGATGTGCCGTGGGTAGGACGAACCGAACCACGAGGACGTCACAAGCACCAAATACCAGAAGTAAAGAAGCACAGAGACAACGTGAGATCTGTACTAGAGAATTCGAACGCCACTCCGTTCAAGAGCCAAACGGGGCTATTCTATTCCTGTAACTTTTGCCAGAAGCAGTATTCACTACCCAAAGACTTAAAAGAACATACGCTCGAGCTACATAAAGATGTGTCTAAAGCTGCTGACATTAAAGTAGCTTTTGGATTCAGCATAAAGCTTGATATAACCGACTTGAAATGTAAAATTTGCGATGAAAACATGGATTTGCTGGAGGATTTAATGTGCCATTTGACTGCGGAACATGAGGTTGTTATACACACGAACGTCACTAACCAAATGGTTCCATACAAGTTTGATAGTAAGGAGATGAAGTGTGTTATGTGCTCGCACGTTTTCAATTACTTTAAACTGTTAGCCGAGCATATGAGTGAGCATTACAGGAATTTTGAATGCGAAATTTGTGGCACGCCCTTTATAAATAAGCAGAGATATAAAATGCATAAAGAGAGACACAAAACTGGAGTGTACTATTGTAGTTTTTGTCCAAAAGCTTTCGATAATAAGATGCGAAGACGCGATCATGAAAGAGTAGTCCATATAAATGGGAATAGGACGCAGAAATGCAGTTATTGTAACGAGAAGTTTGTGAACGTCGTTCAAAAGTTGGATCACGAACGGACTATCCACGGCGGTACCTACAGAGTGTTTAAGTGTCATGAGTGCGACAAAGATTTTGACAACCAAAAAGCCCTGAGTGGACACGCCAAACGGTTCCATTTGATTCATAAACAGTTTCGATGCGATGAGTGTGATATGGCGTTCTTTAGAAAACCTTCATTGTCTAAACATATGGAGAAGCATTCCGTGGTCGGCGATTTCCTGTGTATGCTTTGCAGTAAGAGATTCGTCGATAAGAGTTCTATAAGAGAGCATATGAAGTATCACAATGTTGAAAATAGATTTGAATGTAGCTTTTGCTCAGAACTGTTTTCTGAAGAAACCTTGTGGAAAGACCACATGCTAGAGCACAGTATATTGAATTAG
- Protein Sequence
- MESSASPSKSDINMFFGRCKCCLEYGYMKDIWSEYYWEGIPEIYGEMLMETFSVTWDSADDAREYICEGCVIRLRDAFNFKKDMLASEKLMDEDIDEFENDSFKIEVIDDFEGSEENMNEEDTKRDEKPSASETEYYEVEYLEDEIEIKDEPREAKTTNPEAKQQQEICKWPTRRRRGGYMRTYKNYTPDDLRLCLEAVRSREMSVSEASRLYNVPRKTVAAKLIEKPKMKRLPDVPWVGRTEPRGRHKHQIPEVKKHRDNVRSVLENSNATPFKSQTGLFYSCNFCQKQYSLPKDLKEHTLELHKDVSKAADIKVAFGFSIKLDITDLKCKICDENMDLLEDLMCHLTAEHEVVIHTNVTNQMVPYKFDSKEMKCVMCSHVFNYFKLLAEHMSEHYRNFECEICGTPFINKQRYKMHKERHKTGVYYCSFCPKAFDNKMRRRDHERVVHINGNRTQKCSYCNEKFVNVVQKLDHERTIHGGTYRVFKCHECDKDFDNQKALSGHAKRFHLIHKQFRCDECDMAFFRKPSLSKHMEKHSVVGDFLCMLCSKRFVDKSSIREHMKYHNVENRFECSFCSELFSEETLWKDHMLEHSILN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00682807;
- 90% Identity
- iTF_00682807;
- 80% Identity
- iTF_00682807;