Emer030105.1
Basic Information
- Insect
- Eudonia mercurella
- Gene Symbol
- -
- Assembly
- GCA_963082485.1
- Location
- OY720042.1:15763555-15766056[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-09 1.6e-06 28.9 0.1 2 40 16 54 15 59 0.87
Sequence Information
- Coding Sequence
- ATGGTCAGTAACTATAAAAGGAAAACGGACAAATCGTCCTATTCTAGGGAGAAGCTACAAGCGGCAGTAAGAGCTGTAAAAAATGGGGAGCTGAGTGGTTACAAGGCTTCACAAGAGTATAAAATTCCGAGAATGACCATTATGGATCACGTGAATAATAAGAGGACCAAATCAAGTTCACTAGGAAGAAACACTGCATTGCCATTACAAGTAGAAAAAAAGTTAGCTGCCTGTCTTCACCAGATGGAAAAGCATGGCTTTGGATTAACCAAAACAGAAATGCTGGAAATGGTGGCCGAATTTGTGAAAAGGAACAAAATATCGACGCCATTTAAAAACGGAACACCAGGTAATGCGTGGTTCGCTGCATTCAAAAAGCGACATCATTTATCTGTTAAaaaacctcaagcggttgaATACGCGcgaaaaaaagcaataaatccATTTGTTGTATACCAGTACTTCGATTTACTCAAGCAAACATTAAACGATTTAAATCTTTTGGAAAAACCATCCGCCATTTGGAATTTAGATGAGACAAGCTTTTCTAATGACCCAGAAAAAACGAAAATCGTTGGACTTAAAGGACACGCGGCTACTAGAGTCATTGCTTCACCTGGAAAGAATAACACAACTGTTTTGCTTGGAGTCAATGCGATTGGAGAAAAAATGCCGCCTTTGATAATTTATAAAGGCAAAAATATGTGGGACGAGTGGACATCGCCACAAGCTTACCCAGGCACAACTTATGCTGCGACTAAGAATGGGTGGATGGAGACAGAGGTATTCGAGACGTACTTCAAAAAAGTCTTTATCCCAAATATAGGGGATAAACGTCCAGTTCTGCTCACATATGATGGCCACGCGACCCATGTGGGGTTAAATATAATTGAAGAAGCTCGAAAAGCCGATATAACGATACTGAAATTACCAGCACATACCAGTCATGTTTTGCAGCCGCTTGATGTGGCAGTTATGAAATCGTTTAAAGACCGTTGGGATCAGCTTCTTGTCAAATGGCAGCGTTTGAATGTTGGAGTTACATTATCGAAAAAAGAGTTCACGAGGCTAATCGGAGAAGTTTGGACGCAGATCGACAGTCATGTTTTGAAGAATGGTTTTCGTAAGACAGGAATTTATCCTTTTAATCCTAAAGCAGTTGAAGAGAACCAATTCGACTCGTTGAAGCTTGAACAATGGAAAAATCTTCAAAAACTTGAGTCCCAAGAGAAGCTTGAACAGATTTCGCTCATTTCTAAAAAAGAATGTCCTAGTTTTGATGACAAAGTTGAGCAGTCTTCTACCAAAAGCGACccaaaaacacttttttcattagcatttaattgtatttcaaAAATGGCGCACACAGCAACTTGCCAAGAGCGTGACTCCCAGCAGCATTTAGATTCAAATAGTCCTCCTATGATTAATGCTCATGATATGAATGAAAATGAACTGGAAAATGGAAAACACCTAAATCATCAAGCACATGAGGCATCCGAATCCACCAACAAAGATATTTCAAATTGCGAATGTGATGGTAAAAAGATCCACGTATTAGAAGACAGAATTATCTCTTTTGAAGAACTCCTCTTGATGAAAGTTAAAGTTGGACACAGCACAAAACTTAAGCGACAAAGAATGGGACCCGGAGCGCAAGTCATAACTCATGACGATGTTTTGAGGCGTAAAAtggaagaaaaaattaaaaatattaagaaagaaCCAAAGACAATTgagataaaaacacaaaaaaaaaatatattaatggaACCCGGTCCATCAAGTTCGATAAAGAAGCTTGCTAGTAGAGAACgacaacaacaaacaattaaatcGAAAAAGGGAAAAGGTGTTGGTAAAAAGAGTTGTGTCGAtcagaaacaaaagaaattagtaaaaaaatctaaaaagaaaaaacgacGTTCAGACGACTCTACAAGTGTATCGGATTGCATAAGTGAATACAATGATTCCGACATTTGCGACAGTGAACAAAGTTTTGAAGAAGATGCAACAGAAGagatgaaaatattgaaaaatgacaAGACTAAATCACTACCAGTAAAAGAGATACCTGAGAAAGTTTGCTGCAAACTAGTTGAAGAAAGTAAAGACGTTGAAGAAAACTGTAAGTTCGAAACAGAAAATTATGATTATGAGAATGAAGGTGattcaaataaagttatttcagAAGAAGATAAACTAATACTGGATTATGGCATTAATGACATTATACTCGTACGATACTTAACTCGGAAAAAATGGACATACTACGTAGGCTATGTAGAAGAAGTCAAACCTGTTGACGACGAAATATATTAttcaacaacattttataagacTGTAAAAAAACCACTAAAgtttatattaacaaaaaaaaaggactaTGACAATGTCCCGAGCCTatctattgtaaaaaaaattagtttgtgTCGGAATCCAGAGAATCCCAAAGAATTTATATTGTCTAACGATGACGACGctatctattttttataa
- Protein Sequence
- MVSNYKRKTDKSSYSREKLQAAVRAVKNGELSGYKASQEYKIPRMTIMDHVNNKRTKSSSLGRNTALPLQVEKKLAACLHQMEKHGFGLTKTEMLEMVAEFVKRNKISTPFKNGTPGNAWFAAFKKRHHLSVKKPQAVEYARKKAINPFVVYQYFDLLKQTLNDLNLLEKPSAIWNLDETSFSNDPEKTKIVGLKGHAATRVIASPGKNNTTVLLGVNAIGEKMPPLIIYKGKNMWDEWTSPQAYPGTTYAATKNGWMETEVFETYFKKVFIPNIGDKRPVLLTYDGHATHVGLNIIEEARKADITILKLPAHTSHVLQPLDVAVMKSFKDRWDQLLVKWQRLNVGVTLSKKEFTRLIGEVWTQIDSHVLKNGFRKTGIYPFNPKAVEENQFDSLKLEQWKNLQKLESQEKLEQISLISKKECPSFDDKVEQSSTKSDPKTLFSLAFNCISKMAHTATCQERDSQQHLDSNSPPMINAHDMNENELENGKHLNHQAHEASESTNKDISNCECDGKKIHVLEDRIISFEELLLMKVKVGHSTKLKRQRMGPGAQVITHDDVLRRKMEEKIKNIKKEPKTIEIKTQKKNILMEPGPSSSIKKLASRERQQQTIKSKKGKGVGKKSCVDQKQKKLVKKSKKKKRRSDDSTSVSDCISEYNDSDICDSEQSFEEDATEEMKILKNDKTKSLPVKEIPEKVCCKLVEESKDVEENCKFETENYDYENEGDSNKVISEEDKLILDYGINDIILVRYLTRKKWTYYVGYVEEVKPVDDEIYYSTTFYKTVKKPLKFILTKKKDYDNVPSLSIVKKISLCRNPENPKEFILSNDDDAIYFL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00682343; iTF_00682344; iTF_00682345; iTF_00985953; iTF_00985951; iTF_01569248;
- 90% Identity
- iTF_00682343; iTF_00682344; iTF_00682345;
- 80% Identity
- iTF_00682343;