Emer031352.2
Basic Information
- Insect
- Eudonia mercurella
- Gene Symbol
- -
- Assembly
- GCA_963082485.1
- Location
- OY720043.1:14746270-14748066[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-12 5.2e-10 40.1 0.0 2 40 19 57 18 61 0.92
Sequence Information
- Coding Sequence
- ATGCCTCGACATTATAAAAGGAAACTTGGGTCTAGAGACTACAAAAATTATACCGAAAGTCGCTTAGAAGAGGCTCTCAAACAGGTTGTTGAAGGGAATCTTTCAATTAGAGCTGCCTCTAATGAATACCAAATACCATACGGAACATTGTACAATAGATACAAAGGTAAACATGTAAAGAGACCTGGTGCTCAGACAGTGTTCAGTGAAGCTGAAGAAGTAACACTCTTGAAATCTGCTGCCAAATGTGCAGATTGGGGGTATCCTTTGAATATCCTAGATTTGAGGTTTTTAGCTAAATCTTACCTTGACAGAAAGGGAAGAACAGTGTccaagtttataaataatttgcctGGAGAAGATTGGGCCTACTCCATTTTAAAAAGGCACAAAAGTGAATATTCCAAGCGAGTCGctactaacataaaaaaagcaaGAGCGAACGTCTCACACGagtcaattaataattattttgacaatCTAGAAACAAATGTTTCCATTGCAGACGTACCcgcttcaaatatttttaattatgacgAGTCTAATGTTAGTGACGACCCGGGGAAAAAATTAGGTATATTCAAGAGAGGGGTAAAGTATCCCGAGAAAGTGATGAACTACACCAAAAGTGCAACCACGGTCATGGTATGTGGTTCAGCGGACGGAGTTCTTTTGCCACcgtacattatttataaaagcgTACATATGTATGATACATGGAAAGAGGGTGCGCCACGTGGTGCGCCATGCTGCGAAAAGTCCTGCTGTTCCCAGGGTTCCAGATTTAATCGGACATCTAGTGGATGGATAGATGCAGTTACCTTTCGCGACTGGTTTACGACCACTTTTCTTCCTCATGCACAAGCTTTGCCAGGTAGAAAAGTAATCATAGGTGACAACCTTTCATCACATCTCGATACGGATGTATTTAAGCTCTGTGAGGAAAATGCGATcgattttgtgtgtctagtacCAAATTCTACTCATCTCTGTCAGCCACTGGACGTGGCCTTCTTTCGGCCATTGAAGTCTGCCTGGAGGCAAATACTGACCACTTGGAAGATACAAAATCCCCGTTTACCTACAGTTCCAAAAGATTCATTTCCGAGACTTCTTTGTAAAGCACTggaaaaaatgaataatttcaaAGCTAAACCACATGCTCCATTCTCCGATATTTCAGGAGGCGTGAAGAGAAATTTGGTAAGTGCATTCAAAGCGACTGGCCTATATCCATTGTGTAGAGAACAGGTCTTGAAACGCCTTCCATCTGTAGTAGTAGAACCTGATCCCACAAAGGAAGTGGAAAGCGTACTTACTACGTTCCTAAAAGAACAAAGGTTTGGTGGAGAGACAAGCGGTCTTAGACCGAAAAGAACACGTCTTAATGTTGTGCCAGGTGCAAGTGTCTCGACTGTAGAACCTCAAATGAGAGTTACAAACACCACTTCTCCAAATGAAACTCCAATTAATGAAAACTCGGAAAGCGAAAGTCCGCCACCATCAGAAAGTGACGAGCTGGAGGTGGGGAGATATGTTTTATCTAAATTTTATTCCAGAGGAAGCCGAAAAACATACAAATACGTTTGTCGGATCACAGACTTGATCCCTTTGATCGCTGTAGGTTTCAAGTCCATGGGAAACAAGAAGTGCTTCCAGTTAGTACGAGATGATATATCGGAAATTAATAAAGAGGACATTGTTGCATATCTTCCAAAACCGTCAATCTTTGAAAATGAAGACGGCATTGAGTGTTGCAAATTTAAtttcgatataaatattttagaaatatcttaa
- Protein Sequence
- MPRHYKRKLGSRDYKNYTESRLEEALKQVVEGNLSIRAASNEYQIPYGTLYNRYKGKHVKRPGAQTVFSEAEEVTLLKSAAKCADWGYPLNILDLRFLAKSYLDRKGRTVSKFINNLPGEDWAYSILKRHKSEYSKRVATNIKKARANVSHESINNYFDNLETNVSIADVPASNIFNYDESNVSDDPGKKLGIFKRGVKYPEKVMNYTKSATTVMVCGSADGVLLPPYIIYKSVHMYDTWKEGAPRGAPCCEKSCCSQGSRFNRTSSGWIDAVTFRDWFTTTFLPHAQALPGRKVIIGDNLSSHLDTDVFKLCEENAIDFVCLVPNSTHLCQPLDVAFFRPLKSAWRQILTTWKIQNPRLPTVPKDSFPRLLCKALEKMNNFKAKPHAPFSDISGGVKRNLVSAFKATGLYPLCREQVLKRLPSVVVEPDPTKEVESVLTTFLKEQRFGGETSGLRPKRTRLNVVPGASVSTVEPQMRVTNTTSPNETPINENSESESPPPSESDELEVGRYVLSKFYSRGSRKTYKYVCRITDLIPLIAVGFKSMGNKKCFQLVRDDISEINKEDIVAYLPKPSIFENEDGIECCKFNFDINILEIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00682290;
- 90% Identity
- iTF_00682288;
- 80% Identity
- iTF_00682290;