Elac002324.1
Basic Information
- Insect
- Eudonia lacustrata
- Gene Symbol
- GATA-B
- Assembly
- GCA_947562085.1
- Location
- OX387341.1:27342321-27348779[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-16 1.5e-12 47.8 7.8 1 34 11 43 11 45 0.97 2 2 6.3e-18 2.3e-14 53.5 5.7 1 35 64 97 64 98 0.97
Sequence Information
- Coding Sequence
- ATGGCGGAGTTTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCACCGTGCACACGCCGCTGTGGCGCCGCGACTGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGGCGGGCACGAAGCGGCCGGGCACCACGTGCACCAACTGCCGCACCGTGACGACGTCGCTGTGGCGCCGCAACGCGCACGGCGAGACCGTCTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAGCGTCAACCGCCCGCTCGCCATGAAGAAGGACGCCATACAGACAAGAAAACGAAAACCAAAGAACGGCATGAAGTCGGAGCGGAACATCAAGTCGGCGGTGCAGCGCTCGCTCGCCGCCGGCGTCAAGATGGAGAGCCTGCGGAATTTGCCAAACTGCAATGATATAAAGCTGTCGGAAACGAAGGCAATACCCTCTACCCATCCTTATAAAGCGGGTTTCGGCTGTGACAGTGAGTGCGGGGCGCCTGAGGTCACCGCTCGTTGTGTTACAGTGGAGAGCAGCGTGTCGCGCGGCGCGGCGCTGGGGTACTACGCGCACGCGCAGCACATGAAGCTGGAGGAGCCGCCGCCCGCGCACGCGTACGACGAGCCCGACTACCGGCGCGCGCCCGACGAGCGCCTCGACCGCCCCACCGTCGTGTCCATGGGCAGCTGA
- Protein Sequence
- MAEFFTEGRECVNCGTVHTPLWRRDCTGHYLCNACGLYNKMNGMNRPLKQPRRLAGTKRPGTTCTNCRTVTTSLWRRNAHGETVCNACGLYYKLHSVNRPLAMKKDAIQTRKRKPKNGMKSERNIKSAVQRSLAAGVKMESLRNLPNCNDIKLSETKAIPSTHPYKAGFGCDSECGAPEVTARCVTVESSVSRGAALGYYAHAQHMKLEEPPPAHAYDEPDYRRAPDERLDRPTVVSMGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -