Basic Information

Insect: Eudonia lacustrata
Gene Symbol: -
Assembly: GCA_947562085.1
Location: OX387328.1:16914193-16936518[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 2.9e-05 0.0038 18.4 2.6 1 23 265 288 265 288 0.96

2 8 0.2 26 6.4 5.8 2 23 347 368 346 368 0.94

3 8 0.00011 0.015 16.6 0.0 1 23 372 395 372 395 0.97

4 8 0.081 10 7.6 0.4 2 20 412 430 411 432 0.92

5 8 0.71 92 4.7 5.6 3 23 497 518 495 518 0.94

6 8 6.4 8.2e+02 1.7 0.1 1 23 530 551 530 551 0.81

7 8 7.2e-05 0.0093 17.2 1.0 1 23 557 579 557 579 0.97

8 8 1.7e-05 0.0022 19.2 2.5 1 23 585 608 585 608 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	2.9e-05	0.0038	18.4	2.6	1	23	265	288	265	288	0.96
2	8	0.2	26	6.4	5.8	2	23	347	368	346	368	0.94
3	8	0.00011	0.015	16.6	0.0	1	23	372	395	372	395	0.97
4	8	0.081	10	7.6	0.4	2	20	412	430	411	432	0.92
5	8	0.71	92	4.7	5.6	3	23	497	518	495	518	0.94
6	8	6.4	8.2e+02	1.7	0.1	1	23	530	551	530	551	0.81
7	8	7.2e-05	0.0093	17.2	1.0	1	23	557	579	557	579	0.97
8	8	1.7e-05	0.0022	19.2	2.5	1	23	585	608	585	608	0.97

Sequence Information

Coding Sequence: ATGTCTGAACTTAAAATATGTAGAATATGCCTCCGCACAGAGGCCAAAGCTTACAAGTTCGATCGATTTCAGCTAATGTATTATTATGAGGAAGTTATGGCTTTAAAGGTTAATGAAAATGATGGTCTTCCTCACTACTTTTGCTATGAATGTGCCACATTACTTCATAAATTCCATAAATTTAAAGAGAAATGCTATAGGGGCCAAAAAGCACTTAAGGAAATGCTTTGGAAAGGAGCTATCACTTACGAAGAAGTGTATAAAATAGATAGAACCGCATTAAACCTCAAATCTCTAGAAGTCCTTACAGTTAACGATAGAGTCAAAACATATGTTACCAATGACAGTTTGGAAGTTGAAGCCATAAAAGAAGAAGAGCTTGCATTGGACACTGAATGTAATACCGAACTTAGTTATAAAAGTACGTTCTATGACTGCGATGGTGATGCTGAGCCCGATATAGATATTGCCGACCAAGATACTGATGATGAGAAACCACTGTTGCTACCTAATCATAAACAAGTAGATATTCTTAAACCTTGTAGTCCAACAACAATATTCATCGATGAAAACAAGGAAGTGATCAATATAAAAAATGATACTATAAAGGAAATCAACGATACAATTGTAGCTATCACTCCTAACGCTAAAAAGTATAAGTTTAGTTCTACAAAGAAGAAACAAACGAAATTTTTGGACGCCAACCATTGGAAGAAGTTTAATCTGTCGGAAGAAGAAGCCATTAAGGAGTTTCGAGCACTCGCTGAGAATCAGAAATATGTGGCTGCGGCATACAAATGTACAAATTGTTTCAAAGGTTTTTCTAAGAAAGATATGTTGACCAGACATGTGCAACTGAGGCACACTGAGGGTTCACACGAATGTCGATTTTGCCGGATGCGGTTCAAATGGGACTGTATCCTCAGGAAGCATATGAGGCGGCACTTCACCAAATACGAATGTTTGCGGTGTAATTTAGTCTGTCCTCTTGAAGCTACAGCAATGCTTCACGAGGACTATCACAATGGAATAATCAAGAAGTGTATTCACTGCAACGAAGAATTCAGACACATGTCGACTTACTACACGCACCTGCGTTCGCACCGCAGCGAGTACGTTTGTGCGCTTTGTGGCGCGTCGTTCGTCAGCCCGGCGGGGCTCAACCAGCATAAGAAGGTCAAGCATTGTGCGGATGATGTCGAGAGTCCCGATGATGATGAAGACGTGAACACTTCATGCGTGAAGTGCGACATCACCTTCGAGACGCGCAAGGCGTACGTAGAGCACCTGTTCCACTCCGCCATGCACTCCGAGGGGCTCGAGAATGAGCTGCAAGACGAATACTCATTACCAAGGAAGGTGCTTGGGAAAAAGGAACAATCAAAGATTACCAAAGAACTGCTGAAAAGAAAATCGGAAGATGATCCAATTATGCCTTTCAAGAAACGTTCAAAGAAACCCAGGCGTATGCGGCGCAAACCTATGGACTGTCATCAATGTGGCTTGCACTTTGAGACGCAGGCGGCGTGCATGCGGCACCACCTGTCCGCGCACCCGCGCACGTCCTTCTTCCCCTCCGCCGAGCGGCACATCTGCGAACTATGCGGCGCTTCGTTAGCGCCGGGCAGCGTGGCGATGCACCAGAACATGCACACGCGCAGCAAGGTGTTCTCGTGCGACGCGTGCGGCCGCTCCTTCCACTCCAGCGTCGGCCTCAAGCGGCATTTGGTGACGCATACTGGCGAGAAGCCGTACGCGTGCAGCTTGTGCGACAAGCGGTTCACGCAGAGCAACAGCATGAAGCTCCACTACCGAACCTTCCACCTCAAGCAGCCCTACCCTAAACGAAATAGAAGAAAAAAGAAGGACGAACCGCACACGACAGCGGAGGACGCTGAAGACTCCAAAAGCGACGAATCGTCCGACGAAAGTTTACCGGAGCCCGAAATGCAGCCCATAGCCGAACCGAGACTCGAATCAATCGTGATGCAAGAGAGATTACCAGAACAGAGCATGCATTACTTGACGCTGTCGTAA
Protein Sequence: MSELKICRICLRTEAKAYKFDRFQLMYYYEEVMALKVNENDGLPHYFCYECATLLHKFHKFKEKCYRGQKALKEMLWKGAITYEEVYKIDRTALNLKSLEVLTVNDRVKTYVTNDSLEVEAIKEEELALDTECNTELSYKSTFYDCDGDAEPDIDIADQDTDDEKPLLLPNHKQVDILKPCSPTTIFIDENKEVINIKNDTIKEINDTIVAITPNAKKYKFSSTKKKQTKFLDANHWKKFNLSEEEAIKEFRALAENQKYVAAAYKCTNCFKGFSKKDMLTRHVQLRHTEGSHECRFCRMRFKWDCILRKHMRRHFTKYECLRCNLVCPLEATAMLHEDYHNGIIKKCIHCNEEFRHMSTYYTHLRSHRSEYVCALCGASFVSPAGLNQHKKVKHCADDVESPDDDEDVNTSCVKCDITFETRKAYVEHLFHSAMHSEGLENELQDEYSLPRKVLGKKEQSKITKELLKRKSEDDPIMPFKKRSKKPRRMRRKPMDCHQCGLHFETQAACMRHHLSAHPRTSFFPSAERHICELCGASLAPGSVAMHQNMHTRSKVFSCDACGRSFHSSVGLKRHLVTHTGEKPYACSLCDKRFTQSNSMKLHYRTFHLKQPYPKRNRRKKKDEPHTTAEDAEDSKSDESSDESLPEPEMQPIAEPRLESIVMQERLPEQSMHYLTLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00683757; iTF_00682909;
90% Identity: iTF_00683757; iTF_00682909;
80% Identity: -