Basic Information

Insect: Eudonia lacustrata
Gene Symbol: RREB1
Assembly: GCA_947562085.1
Location: OX387328.1:10172825-10177443[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.032 4.1 8.9 0.8 1 23 56 79 56 79 0.96

2 11 0.015 2 9.9 0.1 1 23 262 284 262 284 0.97

3 11 0.00082 0.11 13.9 0.4 1 23 293 315 293 315 0.99

4 11 0.00051 0.066 14.5 2.0 1 23 321 344 321 344 0.97

5 11 0.0021 0.27 12.6 1.6 1 23 694 717 694 717 0.96

6 11 0.00017 0.022 16.0 1.3 2 23 914 935 913 935 0.97

7 11 0.018 2.3 9.7 5.3 1 23 941 964 941 964 0.97

8 11 0.17 21 6.6 1.6 1 23 997 1021 997 1021 0.89

9 11 1.4 1.8e+02 3.7 0.3 1 20 1044 1063 1044 1067 0.74

10 11 0.0013 0.16 13.3 0.2 2 23 1107 1128 1106 1128 0.96

11 11 0.02 2.5 9.6 5.3 1 23 1134 1156 1134 1156 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.032	4.1	8.9	0.8	1	23	56	79	56	79	0.96
2	11	0.015	2	9.9	0.1	1	23	262	284	262	284	0.97
3	11	0.00082	0.11	13.9	0.4	1	23	293	315	293	315	0.99
4	11	0.00051	0.066	14.5	2.0	1	23	321	344	321	344	0.97
5	11	0.0021	0.27	12.6	1.6	1	23	694	717	694	717	0.96
6	11	0.00017	0.022	16.0	1.3	2	23	914	935	913	935	0.97
7	11	0.018	2.3	9.7	5.3	1	23	941	964	941	964	0.97
8	11	0.17	21	6.6	1.6	1	23	997	1021	997	1021	0.89
9	11	1.4	1.8e+02	3.7	0.3	1	20	1044	1063	1044	1067	0.74
10	11	0.0013	0.16	13.3	0.2	2	23	1107	1128	1106	1128	0.96
11	11	0.02	2.5	9.6	5.3	1	23	1134	1156	1134	1156	0.97

Sequence Information

Coding Sequence: ATGGACAATATGATGGACATACAAGACATGAGGCTGAACCGGACCACGAGCATCGACAGCGACAACCGTTCAGACAGAAGCGAAGAAGAAGAGTCCAGAAGAGCCCGGAAGAGGCAAGCGCCAACTTCGCCTACTCCTATTCCATTAGACAAGAGAATCGCGAGATTTGAATGCCCGAAATGCAGACTACGCTTCGACTCTGCAAACACTTTTGATCTTCACCGCTTCACAGCGCACGGTGACGACACTAGAACAGGATACGACGACTTAAGCTTCGATATCCCGAGCAAAAAGTTTGCAGACATCGCTCGCAACTCTCATTTATCAGCCAGTGACCAGCGGTTGCGATGCGATATGTGCTCACGGGATTTCCCTTGTATGCAAGCTTTAGATGTCCACAATAAAACGTGCACAAGCATAACTCGAGTCCCGAGTCCCGAACGAGATAGAAGGGAAGACTTTTTCGCTAAGCTCGATCTTAGAAACCGATCTTTCGGCATCCCTGGAACGTTAACTCCACCTATGGATAGGTTCACACCGAAATTTGATGATGGTCACCTAAACGGCATCCGACATATCGATGCTGTAAGAGACTTAGCAGATATTCAATCTATTTTAAACGTGACGGCTACTGGAAGTCTGTTAGAAAAATTAACAGGGACTCGAGTATCGTTAGGCGATGCTGTGTTGACACCACCAGATACTGGATCTAGGGATAGAGACCAAGAAGAGTCGCAAGATAATTTTGCAGCGGAATTCAGACGAATGAAGCTAAGGGGAGAGTTCCCCTGCAGATTATGTCCAGCTAAATTTCCTAACCTTCGTGCATTGAAAGGACATAACAGAGTGCATCTCAGTGGCACTGGACCAGGACCATATCAATGCAACATGTGCCCTCATGCTTCTCTTGATAAGGCTGCTTTAGTGAGACACATGCGTACACACAACGGTGACCGTCCCTACGAATGCGCAGTCTGCAACTATGCTTTTACTACAAAAGCAAACTGTGAACGACACTTAAGAAATCGACATGCCAAGGTCACACGAGAAGATGTGAAACGCTCAATCATTTACCACCCATCCGAAGACCCCAACAACGATGAAGTCAACTCGAAATTGGCTCGTGATGAAGTGAAGAGGTCCCTTGCGTTCCAAACTCCAGAAATTGAAAGACGCACTAGTGAAAGCACTGGTAGAGATACACCTCTCTCTCATTTCACACCTAGTTTCATAACTGAAAGACATCCAGTTGCATCATTAACCACAAAACCACTTATACCAGAAGCTCCTATAATTGCGCCTAGAGAAACTGAGCAAGCTGTGCCTAGAATTAAAGTAAAGGGTATCGGTCAACTTAATCAGATACCAGAGTTTAGGCCACCTGAAATCCCGTACAAATCTAATGATATCCCATCCGAGAGCTACGATGAAGAAGCTCCGGTAGATCTCAGTACAAGTGATAATAACAGTTGCGACGTTCTTGATCTCAGTAAAAAAAAGCGTGATGTCGATAATGACGAACCCAAACCCCCACCGAGACCATCGTTTGAACCAGACCCCGCAGCAGTCGCTGCCTCCACATTTGAAAAGGCAAGATTACTAATAGCCCAACAAAGACTTTTCGAAAATACTCTTCCAAAACTCGACTCTGCCTACTACGCAACTCAACTATCACAACTCTACGCGGGCTCAGTCCCGGGAATTCCAGGGCTCCCTTTACCACCATCCTTTCCAATCAGCCCTTACTTTCTCCAACCTTCTTTTTTTCCTCACCCAACTGATTCCCAAGAACTTGCCGAAATAAAGCAACGCATACAAAAAGAAATAATCCGCGGCTTGAGTATGTCGGGTGGTAGACTAGTTGCTAATGAACAAGAAATACCACCAAAGCAAGAACCTGAAGAAGAAGAACAGAAGCCCTTAGCACTGCCTAGATCTCCCTCACCACTTCCTCAATCTGAATCTCCTAGACCATTGAGTAACAACCTCGTTTCACCAAATGACTCAGTAAAGATGGTGATTAAAAATGGCATCCTTATGCCAAAGCAGAAACAAAGACGCTATCGGACCGAAAGGCCATTTTCATGTTCTCAATGTTCTGCTCGTTTTACTCTAAGATCGAACATGGAGAGACACGTTAAACAGCAACATCCACAACATTGGAGTGTAAGAAGACCAGCCCCGAGGGCTCCTCCACCTTACCCAACCCCTGATGGTTTGGCAGACCGAGTAAAGTACGCTCTTTTAGCTCGCCACTTAGAAAGACCTCTACAACAATCTGATCGTTCTCCAGCACGAAGAGATTCGGACGAAGTAGCTGATAACGAAGAAGATGAAGACGATGCCTTGATCATCGATGAAGAACCAGAGTCTGATCTGAAGTCCGATGAACATTCAGCTGCGCACAGAGCTGCAGCAGAAATTCTGATGGCAACACGCCAGCAAGAGCTCCACAAGGACTTTGACTTAAAAATAGCAGGAAGTTTAATCAACAAACCAACTCCTATACCAAGTGAGAAGACTGAAACAGGAACAGACCCCATTCCAGCGTCCGCTAACGAAGTCCGGCCGATCCCGGCAGTGCCTACGCGCAGTGATGAAGAGGAAGATGAAGAAGGCCTTGTCGCATCTACCAGCGAAGGCAACAACTCTGGAAGTGATGAAAACAAGTCCGATGCCGATACTGGAAATCTACCACCGAAAAAGAAGTCCGCGTACAGCTTGGCTCCAAACAGAGTGTCATGTCCATACTGCCATAGAAAGTTCCCATGGTCATCATCTCTCAGACGTCACGTGCTCACCCACACCGGGCAAAAGCCATTCAAGTGTCCTCATTGCCCGTTACTCTTCACAACGAAATCTAATTGTGACCGCCACTTACTGAGAAAGCATGGAGGATCGGCTCGCGCTATCCTGGCTGAACCTGTTACTGACTCAGCGACGCAGCAGCAGCCTTCAAACGACACAAGAACTGTCCCCGAAAGACCGTTTAAATGTGCCTCATGTCCCACCAGTACATTCTCGACTATGGACACTCTGAAGAAGCACATGACGAACAGACACGGTACTGGCGACTCTCAACCATGTTCACCCAACCCAGAGAATGACGAAGCGTCAGAGGGTCTTGTCTTTAAATGTCATCTCTGTGAAGCATCGTTCGGTGAGAGAACAGGGGCATTAGGCCACTTGGCCTCTACGCATTTGTCTGAATACGAGCAGTTGGTCAACAAGGGTGCTTTGGACGCAACCAGCGATAGAAGTGAAAGTGCTGATGATGACGAGCGGGGCAAGTTTCCTGACCATGCCAATAGAAAGGTGGTGTGCGCATTCTGCGTTCGCCGCTTCTGGTCTGCGGAGGACTTGCGACGTCACATGCGTACTCATTCCGGCGAGCGACCATTCGCTTGCGACCTCTGTCGACGCCGGTTCACCTTGAAGCACAGCATGCTCAGACATCGCAAGAAGCATCGCGAGGAGATCACTGATGATGAGGAGGCCTCGCCGCCGCACACTCCTCTTGCGCCAGAGAACCTGACCAATGGATATCGCTACCGAGATGACGACGGCTCCGGAAACGAGATACCCAGCAATGTCAACAACAACAACTCGCCTCCAGCCGCGCCCTACGACAAGAAGCTCAAACTGGACATGACTTCGCGCAAATACTCATCGGAAACCGACAATGACACCGAGAACGGTGGCGACCTCATCGGGAAACTTTTGGGCATACCCGACAAGACCATCATCAACAAACTGCTCTCTTCACCAGATGAGGCAGCGAAATTCTTAGGAGTGAACAAATGA
Protein Sequence: MDNMMDIQDMRLNRTTSIDSDNRSDRSEEEESRRARKRQAPTSPTPIPLDKRIARFECPKCRLRFDSANTFDLHRFTAHGDDTRTGYDDLSFDIPSKKFADIARNSHLSASDQRLRCDMCSRDFPCMQALDVHNKTCTSITRVPSPERDRREDFFAKLDLRNRSFGIPGTLTPPMDRFTPKFDDGHLNGIRHIDAVRDLADIQSILNVTATGSLLEKLTGTRVSLGDAVLTPPDTGSRDRDQEESQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLARDEVKRSLAFQTPEIERRTSESTGRDTPLSHFTPSFITERHPVASLTTKPLIPEAPIIAPRETEQAVPRIKVKGIGQLNQIPEFRPPEIPYKSNDIPSESYDEEAPVDLSTSDNNSCDVLDLSKKKRDVDNDEPKPPPRPSFEPDPAAVAASTFEKARLLIAQQRLFENTLPKLDSAYYATQLSQLYAGSVPGIPGLPLPPSFPISPYFLQPSFFPHPTDSQELAEIKQRIQKEIIRGLSMSGGRLVANEQEIPPKQEPEEEEQKPLALPRSPSPLPQSESPRPLSNNLVSPNDSVKMVIKNGILMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPAPRAPPPYPTPDGLADRVKYALLARHLERPLQQSDRSPARRDSDEVADNEEDEDDALIIDEEPESDLKSDEHSAAHRAAAEILMATRQQELHKDFDLKIAGSLINKPTPIPSEKTETGTDPIPASANEVRPIPAVPTRSDEEEDEEGLVASTSEGNNSGSDENKSDADTGNLPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSARAILAEPVTDSATQQQPSNDTRTVPERPFKCASCPTSTFSTMDTLKKHMTNRHGTGDSQPCSPNPENDEASEGLVFKCHLCEASFGERTGALGHLASTHLSEYEQLVNKGALDATSDRSESADDDERGKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREEITDDEEASPPHTPLAPENLTNGYRYRDDDGSGNEIPSNVNNNNSPPAAPYDKKLKLDMTSRKYSSETDNDTENGGDLIGKLLGIPDKTIINKLLSSPDEAAKFLGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00961349;
90% Identity: iTF_00682845;
80% Identity: -