Basic Information

Insect: Eudonia lacustrata
Gene Symbol: -
Assembly: GCA_947562085.1
Location: OX387336.1:676890-683025[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.58 75 4.9 0.7 3 23 245 266 243 266 0.87

2 12 0.039 5 8.6 0.8 1 23 272 294 272 294 0.98

3 12 0.089 11 7.5 1.6 2 23 301 322 300 322 0.91

4 12 0.0026 0.34 12.3 0.0 2 21 329 348 328 349 0.95

5 12 1.5 1.9e+02 3.6 0.2 3 23 447 467 446 467 0.96

6 12 0.021 2.6 9.5 0.1 3 21 475 493 474 494 0.91

7 12 3.8e-06 0.00049 21.2 0.5 2 23 510 531 509 531 0.96

8 12 1.2e-06 0.00015 22.8 1.5 1 23 539 561 539 561 0.98

9 12 0.002 0.26 12.7 5.0 2 23 567 588 567 588 0.98

10 12 2.1e-05 0.0027 18.9 3.1 1 23 594 616 594 616 0.98

11 12 0.00097 0.12 13.7 0.2 1 23 622 644 622 644 0.93

12 12 0.002 0.26 12.6 4.7 1 23 650 673 650 673 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.58	75	4.9	0.7	3	23	245	266	243	266	0.87
2	12	0.039	5	8.6	0.8	1	23	272	294	272	294	0.98
3	12	0.089	11	7.5	1.6	2	23	301	322	300	322	0.91
4	12	0.0026	0.34	12.3	0.0	2	21	329	348	328	349	0.95
5	12	1.5	1.9e+02	3.6	0.2	3	23	447	467	446	467	0.96
6	12	0.021	2.6	9.5	0.1	3	21	475	493	474	494	0.91
7	12	3.8e-06	0.00049	21.2	0.5	2	23	510	531	509	531	0.96
8	12	1.2e-06	0.00015	22.8	1.5	1	23	539	561	539	561	0.98
9	12	0.002	0.26	12.7	5.0	2	23	567	588	567	588	0.98
10	12	2.1e-05	0.0027	18.9	3.1	1	23	594	616	594	616	0.98
11	12	0.00097	0.12	13.7	0.2	1	23	622	644	622	644	0.93
12	12	0.002	0.26	12.6	4.7	1	23	650	673	650	673	0.97

Sequence Information

Coding Sequence: ATGTCCTCGCAGGATTGCCAAATGGCGAACACCGTTAACACAGCTCAGAATGTTATCGATATTAAGCAAGAGTACAACTACGATTCAAAAGCTCACTGTAGATTTTGTGCTGAACTGAAAGTGCGAGATGAGTTATTAGATTTGACTGTACACGACGAAACCTACTTGGAGTTTGTGAAAATTTTAGCATTTTTAAAAGTTGATTTCGTTGATCTTACATGGTCTGATGATTTGCCGAAAACTACTTGCGAGCCATGTTCCACTGCGTTGAATGACGCATTTTTCTTTTTCAAAAAGGTTAAGCAATCCCAGGTCTTTCTGAAGTCCTTTTACGGCAAGACCAAGATGAAACCGAACATAAATAATGAGAAGTCTAATGACGGAGAAGGAAAAACTGAAACGCAAAACCCGGAAACACAACCTCTAACATTGGTCAAACAAGATAAATGCCAGAGTGTTATGGTAAACAGTAACCAACCATTTCAAAGTGATTTAGAAGACTGTACCAGCTCCACTCAAGAAGCCATTAGAGTGCCCATTGTGGAGTTACATTGTGCTGATTCTGATTCAGATTCAAATACCTCGGGTGATGAAGTTGATTATGAGCCGAAACCTAAGAAAAAGCCGGTGAGACGCAAATGTAGCACTGTGTATAGGAAACCGAGAGTGCGCAAACCGGTGGAGAAAAAACCTAAAGTTATGAAAGGGTCCTGGAATCTGTATAAATGGATTTGTATACATTGCAACATGAAGTATGATACAATGTATGAGCTAAGGGCTCATAGTAAGGATTCCCATAATATTTGTTATGGGTTCAAGTGTGTTGATTGTGAAGATGATTTCAACACGTTTAACTCCTTCATTGAGCATGTTAGAAGACACAGACCAAATTTGAGATTGTACTGCCAATACTGCAATGAGCGATTCGACTCCAACTCGGCCTGCTTCGACCATACAGCCATTCACTGGGAAGGCACCCAAAAGGTCTGCGATCGCTGTGGCGAAGTGCTACCCGACCAAGGATCGTTGGAGCGTCACCGTCGGGCGTACAAGAGGAAAGTCATCGCCAGACACTCGAGACGCAAGGGCATCGTAATTATCCCGGAGTATAACGACAAATACGTGGTGCCAGAAGTGCTGAGGTCGTGGGCGGATTACGAGTGGACTTGTTTGCAGTGCTGTGCTCAATTGCCTGATTTGGAAGCGTTGAGGCAACACTCCCAGCAGATACATAACAAGTGTTTCTCGATGAAGTGTGTTGACTGTCTCCTGGTACGGACTTGCTACAGTAGTTTTGTTACGCACGTGAGGAGGCATAGGCCGCTGCTAAATAAATTCTGTCAGTACTGCAACATGTACATCAAGGATCCGATTTTAATGAGCGAACATATAACGTCGCACACCGATCGCCTGCTCCCGCCGTGCGAGGGTTGCGGAAAGATCTTTGAGACCATGGACCAAAAGAAAGATCACGTGAAGCTCTACGACCCTCCTCGCAAGTCCGCGACCCTCACCAAGGAAGATCTGACCTGCGAAGTTTGCGACAAAGAGTTTACAACAAAGGCTACGTTGCGAAACCACAGAGAGATTCATGACATCAACAGAGAGAAGCGATACACATGTGACTTTTGTGGGAAAGCGTTCTTCGATAACACCAACTTGAAAAACCATTTGAAATTGCACAGCAAGAAGACGGAGGAATGCCATATATGTAACAGAAAGTTTCATGCGAAACCGTATTTGAAGAATCACCTGAAAACTCATACGAATGTAAAGCCGTTCTCTTGTGCGGAGTGCGGGAAGCATTTCAGACTGAAGAGGCAAATGCAGAACCATATGCTCACTCACACTGACATCAAACCTTACAAATGTCTGGTGTGCGGCAAAGAGTTTAGAGTTGGTACCCAATTGAAAGTCCATGAAGTACAACACACTGGTGTGATGCCGTACTCGTGCAAGTTTTGCGAAAGGAAGTTTGGTAACTGGTCCAATTGTAACAAGCATATGATAAGGAAACACGGTACTCCATTGGCGAAGACCAAGCTGACACCTCACGGTCGTATAGCCATCGAGGCGGTGACTCCAGAGATGCTAAACATGGGAACTATGAGCACTCAACCGCACAGTTCTGAAATGAGGACGGATGACAGGATGGCTGGTGAAATGAGATTAGGGCCAGATATGAGAATGGGACCGGATATGAGATTGGGATCAGATATGAGACTACCGTCGGATATGAGACTTGATATGACTAAGTTTGCGTAA
Protein Sequence: MSSQDCQMANTVNTAQNVIDIKQEYNYDSKAHCRFCAELKVRDELLDLTVHDETYLEFVKILAFLKVDFVDLTWSDDLPKTTCEPCSTALNDAFFFFKKVKQSQVFLKSFYGKTKMKPNINNEKSNDGEGKTETQNPETQPLTLVKQDKCQSVMVNSNQPFQSDLEDCTSSTQEAIRVPIVELHCADSDSDSNTSGDEVDYEPKPKKKPVRRKCSTVYRKPRVRKPVEKKPKVMKGSWNLYKWICIHCNMKYDTMYELRAHSKDSHNICYGFKCVDCEDDFNTFNSFIEHVRRHRPNLRLYCQYCNERFDSNSACFDHTAIHWEGTQKVCDRCGEVLPDQGSLERHRRAYKRKVIARHSRRKGIVIIPEYNDKYVVPEVLRSWADYEWTCLQCCAQLPDLEALRQHSQQIHNKCFSMKCVDCLLVRTCYSSFVTHVRRHRPLLNKFCQYCNMYIKDPILMSEHITSHTDRLLPPCEGCGKIFETMDQKKDHVKLYDPPRKSATLTKEDLTCEVCDKEFTTKATLRNHREIHDINREKRYTCDFCGKAFFDNTNLKNHLKLHSKKTEECHICNRKFHAKPYLKNHLKTHTNVKPFSCAECGKHFRLKRQMQNHMLTHTDIKPYKCLVCGKEFRVGTQLKVHEVQHTGVMPYSCKFCERKFGNWSNCNKHMIRKHGTPLAKTKLTPHGRIAIEAVTPEMLNMGTMSTQPHSSEMRTDDRMAGEMRLGPDMRMGPDMRLGSDMRLPSDMRLDMTKFA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00683642;
90% Identity: iTF_00683642;
80% Identity: -