Basic Information

Insect: Eudonia lacustrata
Gene Symbol: -
Assembly: GCA_947562085.1
Location: OX387319.1:21550843-21567402[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00089 0.12 13.8 0.1 2 23 270 292 269 292 0.92

2 12 5.7e-06 0.00073 20.7 1.7 2 23 396 417 395 417 0.97

3 12 1.2e-05 0.0016 19.6 2.6 1 23 423 445 423 445 0.98

4 12 0.0027 0.35 12.3 2.5 2 23 452 473 451 474 0.95

5 12 0.12 16 7.0 1.2 5 23 487 505 486 505 0.96

6 12 0.0049 0.63 11.5 0.7 3 23 512 533 511 533 0.96

7 12 0.0012 0.15 13.4 0.1 2 23 553 573 552 573 0.97

8 12 0.00022 0.029 15.7 1.2 1 20 579 598 579 601 0.91

9 12 0.00064 0.083 14.2 1.0 1 23 609 631 609 631 0.99

10 12 0.0046 0.59 11.5 7.3 1 23 637 659 637 659 0.98

11 12 9.8e-06 0.0013 19.9 1.4 1 23 665 689 665 689 0.98

12 12 0.00018 0.023 16.0 5.3 1 23 695 717 695 718 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00089	0.12	13.8	0.1	2	23	270	292	269	292	0.92
2	12	5.7e-06	0.00073	20.7	1.7	2	23	396	417	395	417	0.97
3	12	1.2e-05	0.0016	19.6	2.6	1	23	423	445	423	445	0.98
4	12	0.0027	0.35	12.3	2.5	2	23	452	473	451	474	0.95
5	12	0.12	16	7.0	1.2	5	23	487	505	486	505	0.96
6	12	0.0049	0.63	11.5	0.7	3	23	512	533	511	533	0.96
7	12	0.0012	0.15	13.4	0.1	2	23	553	573	552	573	0.97
8	12	0.00022	0.029	15.7	1.2	1	20	579	598	579	601	0.91
9	12	0.00064	0.083	14.2	1.0	1	23	609	631	609	631	0.99
10	12	0.0046	0.59	11.5	7.3	1	23	637	659	637	659	0.98
11	12	9.8e-06	0.0013	19.9	1.4	1	23	665	689	665	689	0.98
12	12	0.00018	0.023	16.0	5.3	1	23	695	717	695	718	0.96

Sequence Information

Coding Sequence: ATGGATATTGAACCTGTGGCTTCATCTAGTATAACCCAAGGTGACCACTTTACAACTAGCATTGATGTAGTACAAGTCAAAGAGGAAGCTAATAATAGCAATGACAACAGTTTGTCGAACCGAGGCAGCATCACGCCAGTGGAAAGTCTGCGCCCTATAAATGTTATATCATATGGAAACATGGCGCCCGGAGACTTCGATGACGAGTCTAACCATAGAGAACTGCTTGAACTGGAAGCGGCATCTAAGAGCAAACAATTTGTTAGTATGATGAATGAAAACTATTTCGGGGATAATATTTACGCGGATTACTTCACGCCGGACAGAGTGGAGTCATTCGATACGGCTAGGGTGACTAGTCCTAAAGAGGTTCCGAAGGACATGTACATTTGGGGTGAGTCGTCGCACAAGGAGAGCGAGTTTGTCTTGCCGAATTTCATACATGAGAGTTACAAGATTGTTGAGAGCAGTGGGATTGACTACTCGGAGTTGGGTAACAGGGTTGGGCACATAGAGGGCGAGAGTGACAGTAAAGCGGACGTGCTGAGCGAGGGCCGCAGCAGCGAGGGCGAGCCGCCGCTGAACATCTGCGCGGACGAGCGCATGCCGCCGCGCGGCGAGCTCAGCGGCCAGGAGAGCAACGGCGACATGGAGTCTGCGTGGAGCGGGATTTATCCTGATGTCGCGCCGGCCGCACCCTATGACCTTATAGCAAGAGAGAGCTGGGTCTCGGATGGCTCCGAAATGGATGTCACTGAAAAGAGAGATAATTTGGAGGAAGAGTTGTACCCGAAGGCGCGCGGCAGCGTGTGCTCCCAGTGCGGCACGAAGTTCGTGTCGGTCAAAGAGCTGCGCGCGCACCGGGCGCTCGCGCACCCCGCGCCCGCCGCCGACAAGACCTCCTACAGCCGGATGATCACTGCCCGCGCCATCAAGAAGGAGGAGAAACCAGATGAAAAAGTCTTGGAAGAAGCAGCAGCCAGTATGCTGCCGCTGGACTCGAAGGAGTCGATGGCCAGCGCGATGCTGCAGGCGTACGACGGGCTGGACGCCAAGCCCAAGCTGGAGTCGCTCATCAAGCTGGAGCTCAAGCCGCGCCGCCGTCGCGACTACGTCTGCCCCACCTGCAAGGAAGACCAACTGACGGATGTAGCCTTCCATGCGCACCTAAAGATCCACCCGCTGGAGTGCCTGACGTGCGGCAAGTGCTTTTTCCGGCGAGCAAACCTGGCGCTGCATATCAAGACGCACCTCGGCATCAAAAACTTCAAATGCGAGGTGTGCGGGAAGCGGTTCATCACCAAGCAGAAGCTGTCGGAGCACCACAATATCCACACGGGCCGCGCGCCCGTCAAGTGCACCGTCTGCGATGACACCTTCCGCCGCTACTCCAACATGGTGCAGCATCGGGATCGGCACCACTTCCAGAAGAAGGCGAAGGTGCGCGACTACGTGTGCCAGTGCGGCGCCGTGTTCCAGTCGCGCGCCAAGCTGCACTGGCACCGCGAGACGCACGCCGCCAGGCCCAAGGCCTGCCTATACTGCAGCGACAAGTTCGTCCACGCGGCGTCGCTCACGCGGCACGTGCGCCGCGCCCACGACCACTACTACCTGGCGGTGGGCACCAAGCAGCCCAAGGGCAAGCCCGAGAACGTGCCCTGCCCCGTGTGCAAGCAGGTATACCTGCGCTCGAACCTGCGCGCCCACCTATTGACGCACAGCGGCTCGCGGCCGCACGTGTGCGTCGTGTGTAGCAAGGCGTTCACCACCAAGTGGAACCTCAAGCTGCACCGCTGGACGCACGTCAGCCGCTCCGCCAAGCCCTTCAAGTGCACGCTCTGCAAGGGCGCGTTCATCCGCCACGCGGAGTACCTCGCGCACATGAACTCGCACAAGGCAGTGCGCCCCTACACGTGCAACTACTGCGGCTGCCAGTTTATACGCAAGTACAACTGTCAGCGGCACGTCAAAGAGCACGAAATGGCCAAAAAATACGTGTGCAAAGTCCCCGAGTGCGGTAAGTCGTTCCATAGGACCTACTACCTATCAGAGCATATGAAGGTGCATAGCGGCGCTCGCCCGTTCTCCTGCAACATATGCGGGAAGTCGTCCAGCAACAAGTCCAATCATAACAAGCATCTGAAGATCCATCACGCCCGGGAGCCGGTCGCCACGGAGGCGTAG
Protein Sequence: MDIEPVASSSITQGDHFTTSIDVVQVKEEANNSNDNSLSNRGSITPVESLRPINVISYGNMAPGDFDDESNHRELLELEAASKSKQFVSMMNENYFGDNIYADYFTPDRVESFDTARVTSPKEVPKDMYIWGESSHKESEFVLPNFIHESYKIVESSGIDYSELGNRVGHIEGESDSKADVLSEGRSSEGEPPLNICADERMPPRGELSGQESNGDMESAWSGIYPDVAPAAPYDLIARESWVSDGSEMDVTEKRDNLEEELYPKARGSVCSQCGTKFVSVKELRAHRALAHPAPAADKTSYSRMITARAIKKEEKPDEKVLEEAAASMLPLDSKESMASAMLQAYDGLDAKPKLESLIKLELKPRRRRDYVCPTCKEDQLTDVAFHAHLKIHPLECLTCGKCFFRRANLALHIKTHLGIKNFKCEVCGKRFITKQKLSEHHNIHTGRAPVKCTVCDDTFRRYSNMVQHRDRHHFQKKAKVRDYVCQCGAVFQSRAKLHWHRETHAARPKACLYCSDKFVHAASLTRHVRRAHDHYYLAVGTKQPKGKPENVPCPVCKQVYLRSNLRAHLLTHSGSRPHVCVVCSKAFTTKWNLKLHRWTHVSRSAKPFKCTLCKGAFIRHAEYLAHMNSHKAVRPYTCNYCGCQFIRKYNCQRHVKEHEMAKKYVCKVPECGKSFHRTYYLSEHMKVHSGARPFSCNICGKSSSNKSNHNKHLKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -