Elac015748.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eudonia lacustrata
Gene Symbol
-
Assembly
GCA_947562085.1
Location
OX387335.1:4907588-4924488[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.0022 0.29 12.5 0.9 1 23 264 287 264 287 0.94
2 16 0.012 1.5 10.2 0.9 2 23 357 378 356 378 0.96
3 16 0.00072 0.094 14.1 0.8 1 23 382 404 382 404 0.97
4 16 0.011 1.4 10.3 0.9 1 23 409 432 409 432 0.95
5 16 0.099 13 7.3 0.3 2 23 440 462 439 462 0.89
6 16 9.1e-05 0.012 16.9 2.1 1 23 469 492 469 492 0.97
7 16 9.9e-06 0.0013 19.9 0.9 1 23 498 520 498 520 0.98
8 16 0.55 71 5.0 0.1 10 23 583 596 572 596 0.84
9 16 0.075 9.6 7.7 0.6 2 23 625 647 624 647 0.93
10 16 0.1 14 7.3 0.2 2 23 669 690 668 690 0.95
11 16 0.0001 0.013 16.8 0.4 1 23 694 716 694 716 0.98
12 16 0.00063 0.081 14.3 0.2 1 23 721 744 721 744 0.94
13 16 6.1 7.8e+02 1.7 4.6 1 19 750 768 750 773 0.80
14 16 0.0013 0.17 13.2 0.5 2 23 781 803 780 803 0.96
15 16 0.00031 0.041 15.2 3.1 3 23 811 831 810 831 0.98
16 16 4.3e-06 0.00055 21.1 2.0 1 23 837 859 837 859 0.97

Sequence Information

Coding Sequence
TTGAATACAGAAGCCAGAACGCCGAAGACAACGAATCTGGAAGCCAAGCAGCAACAGGAAATATGCAAGAGAAGAAGGCCAGAAGCCAGAAGAGGGCGGGGCGGTTATATCAGAACGTACAAGAACTACACGCCTGAAGACTTGAGGTTGTGCCTCGAAGCCGTGAAGGGCAGTGAGATGTCAGTGTCTGAAGCGAGCAGACTCTACAATGTGCCCAGGAAGACGGTCGCGGCCAAACTCATCGAGAAACCGAAGACGAAACGGTTGCCAGGGCTTAACGGCGGGCGAACGAGTGACACGTTTGTTACGTGTCACTCGTTCGAGGCTGCGCGGCACATTGGCTTTTTTGATGCGAGCGGCGTGCGCCCGCCGCCCGCCGCCTGCCGCGCTGACAAAGCTGCGGGCGCGCAGCGAAGCTCGAGCGTGTTGCTAGCTACGCGTGGTCGGGTGACGCAGCACAGCGCAGTGCAGATTTTGCAGGGCAGGGCAGTAGGGGCAGACATTGGCCGCAAACGCATGCTGCGACGCAGAGTCTCCGAAGGGTTCGGATCGGATCGGTGTCTGCGTCGCACGTGCCTCTCAGCTCTCGGCACAACCACGTACTACAAAATCTGCGCTGTTCTGCGCTGCGCTGGGCTGCGTCACCTGCATGTGCCGTGGGTAGGACGAACCGAACCACGTGGACGTCACAAGCACCAAATACCGGAAGTAAAGAAGCACAGAGACAACGTGAGATCTGTACTAGAGAATTCAAACGCCACTCCGTTCAAGAGCCAAACGGGGCTATTTTATTCCTGTAACTTTTGCCAGAAGCAGTATTCACTACCCAAAGACTTGAAAGAACATACGCTCGAGCTACATAAAGATGTGTCCAAAGCTGCTGATATTAAAGTAGCTTTTGGATTCAGCATAAAGCTTGATATAACCGACTTGAAATGTAAAATTTGCGATGAAGGCATGGACTTGCTGGAGGATTTGATGTGCCATTTGACTGCGAAACATGAAGTTGTTATACACATGAATGTCACTAACCAAATGGTCCCATACAAGTTTGATAGTAAGGAGATGAAGTGTGTTATATGCTCGCACGTTTTCAACTACTTCAAACTGTTAGCCGAGCATATGAGTGAGCATTACAGGAATTTTGAATGCGAAATTTGTGGCACGCCCTTTATAAATAAGCAGAGATATAAAATGCATAAAGAGAGACACAAAACTGGGGTGTACTATTGTAGTTTTTGTCCAAAAGCTTTCGATAATAAGATGCGAAGACGCGATCATGAAAGGGTAGTCCATATAAACGGGAATAGGACGCAGAAATGCAGTTATTGTAACGAGAAGTTTGTGAACGTCGTTCAAAAGCTGGATCACGAACGGGCTATCCACGGCGGTACTTACAGAGTGTACAAGTGCCACGAGTGCGACAAAGACTTTGACAACCAAAAAGCCTTGAGTGGACACGCCAAACGGTTCCATTTGATTGATAAACCGTTTCGATGCGATGAGTGTGATATGGCCTTCTTTAGGAAACCTTCATTGTCCAAACATATGGAGAAGCATTCTGTGGTCGGTGATTTCCTGTGCATGCTTTGCAAAACTGCAGAAGAGGAGGCACGCTACGTTCGACAACAGAATCATTTCAAATTCATTAAAGAAATAAAGCTAGTGCTTACCTACACCAACGCTATACCATTCAAAGTGAAAGGGGCGAAGTACTTCTGCGCTTATTGTTACGTCACTGACGATTTCGAAGATCCCGACGAGTTGAGGATGCATGCGCGCACGCACAAAGCTGAATGGCTGGACGGCATAGACGAGATACTGCGACCTCATTACTTGAACGAGATCCTGCGCATAGACATCGATTGTCTAAGCTGTACAGTGTGTGACGTCACTTTGAAAAATTACAACGACATGTTCCAACATTTGAAGGATCGCCACGAGATTGAACTAGACGAGTGTTACAGTAGACTGATCCCTTTCAAGCTGCGTAGTGATCACTTGAGTTGTGCTTTGTGCGAAGAGAGATTTATGAATTTCGCGTTTCTCGACAACCATATGAACGCTCATTATTGTAATTATATGTGTTCCGAATGCGGCGAGCCTTTCGTGTCTGACTCCAGGTTGAAACATCATGTCCAGATTCACAACACTGGTAAGTTTCCGTGTGAGGTATGCAAGAAAGTGTTTTCTTTGGAGAAGTATATGAGGAAGCATGTCGCTGTGGTGCATAAGAAGTTTAAGAGCTTCCGATGTCTTTACTGCAAGGAGAAGTTTCATACGGAGTTTGAGAGGCATACCCATGTCGTCGATAAACACAATGAGAGAGTAAGGGTGAGCACTTGCAAGATCTGTGGAAAGTCTTTTGATTGGAAGCCGTACTACTTGTCGCATTTACGCAAAGCTCATATTAAAGATAAGAAGAATCTTTGCAGGTATTGTAATAAGGGTTTTGTGACGAAACACGAGCTTAGGTCACATGAGCAAAGGCACACGGGAAGTGGTAAGCATATATGCAATGATTGTGGCAAGAATTTTGTGACTATGATGGAACTGAAGAGCCATATGAAAAGGCACATTAAAGAAATAATTTTAATGGCCAAAATGAAATGA
Protein Sequence
LNTEARTPKTTNLEAKQQQEICKRRRPEARRGRGGYIRTYKNYTPEDLRLCLEAVKGSEMSVSEASRLYNVPRKTVAAKLIEKPKTKRLPGLNGGRTSDTFVTCHSFEAARHIGFFDASGVRPPPAACRADKAAGAQRSSSVLLATRGRVTQHSAVQILQGRAVGADIGRKRMLRRRVSEGFGSDRCLRRTCLSALGTTTYYKICAVLRCAGLRHLHVPWVGRTEPRGRHKHQIPEVKKHRDNVRSVLENSNATPFKSQTGLFYSCNFCQKQYSLPKDLKEHTLELHKDVSKAADIKVAFGFSIKLDITDLKCKICDEGMDLLEDLMCHLTAKHEVVIHMNVTNQMVPYKFDSKEMKCVICSHVFNYFKLLAEHMSEHYRNFECEICGTPFINKQRYKMHKERHKTGVYYCSFCPKAFDNKMRRRDHERVVHINGNRTQKCSYCNEKFVNVVQKLDHERAIHGGTYRVYKCHECDKDFDNQKALSGHAKRFHLIDKPFRCDECDMAFFRKPSLSKHMEKHSVVGDFLCMLCKTAEEEARYVRQQNHFKFIKEIKLVLTYTNAIPFKVKGAKYFCAYCYVTDDFEDPDELRMHARTHKAEWLDGIDEILRPHYLNEILRIDIDCLSCTVCDVTLKNYNDMFQHLKDRHEIELDECYSRLIPFKLRSDHLSCALCEERFMNFAFLDNHMNAHYCNYMCSECGEPFVSDSRLKHHVQIHNTGKFPCEVCKKVFSLEKYMRKHVAVVHKKFKSFRCLYCKEKFHTEFERHTHVVDKHNERVRVSTCKICGKSFDWKPYYLSHLRKAHIKDKKNLCRYCNKGFVTKHELRSHEQRHTGSGKHICNDCGKNFVTMMELKSHMKRHIKEIILMAKMK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00681593;
90% Identity
iTF_00681593;
80% Identity
iTF_00681593;