Basic Information

Insect: Eudonia lacustrata
Gene Symbol: ham
Assembly: GCA_947562085.1
Location: OX387325.1:13783401-13788159[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00041 0.053 14.8 0.6 1 23 43 66 43 66 0.93

2 8 1.1e-08 1.4e-06 29.3 0.1 1 23 72 95 72 95 0.96

3 8 9e-07 0.00012 23.2 1.7 1 23 101 123 101 123 0.95

4 8 2.7e-05 0.0034 18.6 7.1 1 23 129 151 129 151 0.99

5 8 6.5e-05 0.0084 17.4 0.4 2 21 159 178 158 179 0.94

6 8 7.7e-09 9.9e-07 29.7 0.7 1 23 569 591 569 591 0.98

7 8 2.8e-07 3.6e-05 24.8 1.7 1 23 597 620 597 620 0.97

8 8 3e-06 0.00039 21.6 3.3 1 23 626 648 626 648 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00041	0.053	14.8	0.6	1	23	43	66	43	66	0.93
2	8	1.1e-08	1.4e-06	29.3	0.1	1	23	72	95	72	95	0.96
3	8	9e-07	0.00012	23.2	1.7	1	23	101	123	101	123	0.95
4	8	2.7e-05	0.0034	18.6	7.1	1	23	129	151	129	151	0.99
5	8	6.5e-05	0.0084	17.4	0.4	2	21	159	178	158	179	0.94
6	8	7.7e-09	9.9e-07	29.7	0.7	1	23	569	591	569	591	0.98
7	8	2.8e-07	3.6e-05	24.8	1.7	1	23	597	620	597	620	0.97
8	8	3e-06	0.00039	21.6	3.3	1	23	626	648	626	648	0.98

Sequence Information

Coding Sequence: ATGAAGTCTCAACTGACCGTAGTGTACGCACAAGTACAGACAACAGGTGCAACATTAGAAAATGGCCTGCGGCTGCAAGGTCTCGACCGCCACCTGATACAGGCGCACGCGCAGCCCGCAGCAGCTTTCCATTGTGAGCTCTGCAACCGCGCGTACAGCTCCCGCGCTTTACTGCTGAGACACCGTGCACTTGCCCATACAGATATCAGGAAATACCCCTGCGAAAACTGCCCTAAGGTATTTACCGATCCTTCCAACCTGCAGCGTCACATCCGCGCGCAGCACGTGGGTGCCCGCAGCCACGCCTGCCCCGAGTGCGGCAAGACCTTCGCCACCTCCTCCGGCCTGAAGCAGCACACCCACATACACTCCAGCGTCAAGCCGTTCCAGTGCAAAGTCTGCTTTAAGTCTTACACGCAGTTTTCGAACCTGTGCCGTCACAAGCGGATGCACGTTGCGTGCAGAGCTCTGGTAGAGTGCGGAAAATGTGGACAGTCCTTCACGTCCTACGCTTCCTTGACTAAGCACAAGAGGTTCTGCGAAACCGCTGCTGCTGCCTCTGTGAACCTGCGAGGACAAATGCCGCAAGGACTTCCCCAGATCCCATCACTACCAAACGTCGGGATGAATACGCCGAATAACGGGAATCCTTTCCCTCTCTACAGGGGACCAGCTTTGCCCCTCCCATACAACACATTCGCTCACTACCCTGCCCTTTTCTCCGCTGCAGCTGCTGCCTGCCAACCGGATTTATTCAACCCGTTGTTATTCAATGTGCAAGGTGCTAGACTAGCGATGGAACATGACATTGCCATGTCAAACGCTAACATGGTCGCCAAACAACAAGAAGGCCGTATGTCAGTCAAGAGCATCGACAGCTCAACTTCTTTGGAGGAAGTAAAGAGAAAGGACATAGATTTCGAAAGCAACAGCAGAGTTACTGACAATTCAGATAGAGGAACTCCTAAGTCACAACAGTTGTATGCAAAACAATCTCCTCCTTCAATTGAAGAGACTTCACAGCACCGACCTTCACCAGTAATGTCTGTACCGACACCAATAGTTCCATTCAATTTCACTAGAGATGAATTGAAGCGAAAATCACCATTCAACTTCTCGCTGAAGCTTAACAACAACGATATACAAAGGAAATCGGTATCTCCATCTCTCCCTAAAGATCTATCCAAGCATAACACGCATGATGACAAAGTTTCCGAGTATTCTGACGCAGAAGAGGATGCAAAGAAAGATGAAGGAGATCAGCCGTTAGACTTGTCTGTGTCTCGTAAAAGTGACAAGGAATCCGAATTAGACAATGATGATCGCTCGGCTCGCAACTCTTCGGTGAAGTCTTATTCGCCGCCTGAAAGTCCAGCAGCAAGAAGCAAGACACCAGAAAACGACACCACAGATGTAGACGTCGAAGGGGTAGAACCAAAACGAGAGGATTCTCCACTGGTTTCGCCTCCATTGGCTTTTCCGATGCCCGTCCATCCCCAGCACAATATTATCGATGCTATGTACCGCCCAAGATTTCCGTCCTTTCCCTCATCGGAGTCGCTACTGAACTCCTCTCATTCCCCCTACGTACCGAGCCCGTTTAATTTTTTATCCCCACTTCTCGGCACTGACGGACCGGACAGGCAACCCAGTGCCTACGCCAAATTTCGGGAGTTAAACTCTGGATCGAAGCTTCGAGACCGTTACGCTTGTAAATTCTGTGGAAAAGTGTTCCCGAGGAGTGCTAATTTGACACGTCATTTACGTACCCATACAGGAGAGCAGCCTTACAAATGTAAGTACTGCGAGCGTTCCTTTTCCATTTCCTCGAACTTGCAGCGACACGTCCGCAACATACATAACAAGGAGAGGCCGTTCAGATGTCCATTGTGCGATAGGTGTTTCGGCCAACAGACAAACTTAGACCGGCACTTGAAGAAGCACGAAGCTGAAGGCGGGGATTCTCCGAGCTCCGCTGATACTGAAAGGGAAGATGCTTATTTCGACGACATAAGGTCGTTTATGGGGAAGGTGACGTGTTCCCCTGGAGGCACTCCGCCGGCGACGTCGCCGCACGCTCCTCACAGGCCGTCGCTAGCGATCTCTACATAG
Protein Sequence: MKSQLTVVYAQVQTTGATLENGLRLQGLDRHLIQAHAQPAAAFHCELCNRAYSSRALLLRHRALAHTDIRKYPCENCPKVFTDPSNLQRHIRAQHVGARSHACPECGKTFATSSGLKQHTHIHSSVKPFQCKVCFKSYTQFSNLCRHKRMHVACRALVECGKCGQSFTSYASLTKHKRFCETAAAASVNLRGQMPQGLPQIPSLPNVGMNTPNNGNPFPLYRGPALPLPYNTFAHYPALFSAAAAACQPDLFNPLLFNVQGARLAMEHDIAMSNANMVAKQQEGRMSVKSIDSSTSLEEVKRKDIDFESNSRVTDNSDRGTPKSQQLYAKQSPPSIEETSQHRPSPVMSVPTPIVPFNFTRDELKRKSPFNFSLKLNNNDIQRKSVSPSLPKDLSKHNTHDDKVSEYSDAEEDAKKDEGDQPLDLSVSRKSDKESELDNDDRSARNSSVKSYSPPESPAARSKTPENDTTDVDVEGVEPKREDSPLVSPPLAFPMPVHPQHNIIDAMYRPRFPSFPSSESLLNSSHSPYVPSPFNFLSPLLGTDGPDRQPSAYAKFRELNSGSKLRDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFRCPLCDRCFGQQTNLDRHLKKHEAEGGDSPSSADTEREDAYFDDIRSFMGKVTCSPGGTPPATSPHAPHRPSLAIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01282611;
90% Identity: iTF_01331931;
80% Identity: -