Elac016333.1
Basic Information
- Insect
- Eudonia lacustrata
- Gene Symbol
- ZFX
- Assembly
- GCA_947562085.1
- Location
- OX387335.1:13289151-13294437[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 0.01 1.3 10.5 0.4 1 20 100 119 100 121 0.89 2 25 4.1 5.3e+02 2.2 0.3 3 23 127 146 126 146 0.86 3 25 0.0031 0.4 12.1 1.3 1 21 151 171 151 172 0.94 4 25 0.0047 0.6 11.5 0.1 3 23 183 204 181 204 0.93 5 25 0.019 2.5 9.6 1.1 3 20 209 226 208 228 0.90 6 25 0.0001 0.013 16.8 0.6 2 23 243 265 242 265 0.94 7 25 0.00025 0.032 15.5 1.2 2 23 272 293 271 293 0.92 8 25 0.0001 0.013 16.7 1.3 1 23 300 322 300 322 0.98 9 25 1e-05 0.0013 19.9 0.2 2 21 466 485 465 486 0.94 10 25 9 1.2e+03 1.2 0.1 2 13 491 501 491 512 0.70 11 25 0.48 62 5.2 0.1 1 23 517 540 517 540 0.91 12 25 0.00038 0.049 15.0 0.7 1 23 545 567 545 567 0.97 13 25 9.6 1.2e+03 1.1 8.1 1 21 570 590 570 591 0.88 14 25 0.00028 0.037 15.3 1.1 1 23 604 627 604 627 0.95 15 25 8.2e-05 0.011 17.0 1.0 1 23 633 655 633 655 0.98 16 25 0.91 1.2e+02 4.3 0.7 1 23 689 712 689 712 0.87 17 25 9.4e-05 0.012 16.8 1.4 2 21 840 859 839 860 0.93 18 25 9.5 1.2e+03 1.1 0.2 3 23 867 888 866 888 0.91 19 25 8.9e-05 0.012 16.9 1.0 2 23 922 943 921 943 0.97 20 25 0.036 4.7 8.7 3.4 2 21 947 966 947 967 0.93 21 25 0.0014 0.18 13.2 0.4 1 23 993 1016 993 1016 0.92 22 25 4.8e-05 0.0062 17.8 0.8 1 23 1022 1044 1022 1044 0.97 23 25 0.37 47 5.6 0.1 3 23 1052 1072 1050 1072 0.97 24 25 0.0027 0.35 12.3 1.1 1 23 1078 1101 1078 1101 0.94 25 25 0.00011 0.015 16.6 1.2 3 23 1109 1130 1107 1130 0.95
Sequence Information
- Coding Sequence
- ATGGAGTTGTCCTCAATGCTACCTGAGACGGTATGCTCGGGATGCGTTTCCACCGCGATGGTGGCCGCACCATTCGTCCAGCTCTGCAAGCAGGCCGACCGCAGATGGACAGAGATATCAGATTTCCTGACAGACTTGGATGTAGATATCTCGAGCAATACGAAGAGTACATGCATATGCATTGAAAGCGACGAAATCAAAATGGTCCAGTCCATGGAGAAGCTGAATAATCCGAGGAAAGTACTGAGACTCATTAAAAGTACTGGGAAAATTGTGATGGCAGACGGAGATTCAGATTACAAATGTCCCCAGTGCGAAAAGGTCTATTCCTCTATTTACTTACTTAACTTCCACTTGAAGGACATAAACAAGAAGATGTGCACCCAATGCAAGAAGATCGTGAGGCTGGACAGTTTTGCGAAACATGCCGGCCTGCATGGCGCTGTGTTACACACATGCAGCAAATGCAGGAGGATTTTTGTAAACAGATATAATTACGACAGACACGTACAAGTATGCAGAACTAATAGGACAGGGACCCATTTGTGCGCCGAGTGCCCGCAATCATTTGCCACTGATGCGAACTTGGTAGCACATTACGCGTCTAAACACTATCCGAGAGTGTGCGCGGCCTGCGACAAGACGTTCACGAACAAAGTCTGTTTCAAAAACCACGCCATGTTCTGTGCCGACTCCAAAGAAGTTGAGCAAGCTAGGTCAAAGTTAGTTTGCGATTATTGTTCTAAACAGTACAGCTTTAAAAGCGCTTTAAGACTTCACATACGATTCGCGCATACGGTAGGCACGGGCGTTCAATGTGAACAGTGCGGGAAAAAGTTCTCCAACGTCGCGCATCTCCGTGAACATGACAACACTCATAACAGAGTTAACGATAGATTCGTCTGCAGCGTCTGTGGTATAAAGTACAGCACGAGGAGAGGCTATGAGCGTCATTATAAACGCCATTTTAATGACAACGAGGATATATCTAAAATGGACACACCAAACCCCAAACGCAAGTACAGTAAACTTCTCCAATGTATCATTTGCAACTACATGACTGGCGTGGAGTTCGATGGGGACTTGCCACAAGGCCTCTGCCGGTCGTGCTCAGAGAGCGCTCTCGCCGCGATAAACTTCAGGCAACTTTGCAAGGAGTCCTCCAACCAGTGGACGCAGGCCATCTCCTTCATGTCCGATATAGAGTTCCCGGCGGAGGAAAATAAAGTTTACTACATATTCTATAACACACATAAAGATATCATTATCAATGATCAAGTAGAAAAGGCTGTGAAGAAAGAGAAGTCGTTGCAGAGTAAGTCGAAGTTGCAAGACGAATCTGATGAACAAATAGTGGCGAGATCAGAAAGGAAGAAACGCTCTTTGTGGTTGTGGCAATGCCCCGATTGTGGCAAGAAGTTTTCTGTCGCTGTCCACTTAAACTCCCATTTAAAGAATACGAAGAAAAGGGTATGCAACGAATGCGGTTTGGTGGTATCAAAAACGAAGTTTCCTCAACATTTATACATGGCTCACGAGAAGATCGTGTATCCTTGCGGCACATGCTACCAGCTGTTCGAAGATGAGATTTCTTTGAACATGCATATCGGCTTAACGCACGGCAAGAGTTCGCATCAGTGCAGAGTCTGCGGCAACGGTTTTAGCAACGAGAGAGCTCTGAGCGCGCACATGTACAGTCACTCCTTGTTCTACTGTACGCATTGTCGTCGCAGTTTCGAGAACCGCAACTGCCATGTACACCACCAGCGTCAATGCCAAACGGAGACGCCCCAACCTGAATCGAGCGAGTATATATGCGACCACTGTGGCAATTCCTACACGAAAAAACCTTCGTTACGTATTCATATAATACAGAAGCATTTGAATATACTTCCCTATGTCTGTGAGACTTGTGGCAAGCGTACGTCGACTATAGCTCATTTGCGTTCCCACGAAAAGGTGCACACGCTAATTAGGAAGACGTTCCAATGTCATTGTGGCGCTAAAATGCGTACTGAGCTAGGTTATCAATTACACTTGCGCATACACACTGGTGAGAGGCCTTACGAATGTAAGGACTGTGGGGACAAGTTCCTATCTGCTTCTAGAAGGCTTGACCATATCAAACGCAGGCATAGGTCCGCCAAAGACATGCCGCATGGCTGTACCGAGTGCTCCGCGCGATTTATCGACGAAGAGAAAAACTGTCCCAAAGGAGTATGTGTGACTTGCACGTCGAGCGCCCTCGCCGCCCATGAGTTCCGCGTCTTCGTCCGCAACACGCAGAAGACCTGGTCGAAAGCCATCACTGCTATAAGCGATGTGTCCAAGGCATATGCCCCTTCAGTGAAGTCCCTCTGCACATTCATAAAACCAGACTTCCAAGTCCACACAGTCAAAGATTATGCCAGCGGCAGCTCAAAAGCGATTCTGAACAGGCTCAAGCAACGTTTGACAAAGAGGGATTACAAAGAATCCGAAAGGAAAACCAGAACTCCTCGGACTGGACCTGCCTGCAATTGCCCCGATTGCGGCAAAAGCTTCTTCAGCCCGTACTTCTTACGGTTGCATTTGAAAAGCAGCGGCACGAAAGAGGCTTGCTTGCACTGCGGCGCGGTGCTGCTGCGGGGATCGGAAATGAAGGATCACCTGTCCACCGTTCACGGTGAAAAGCTGCTCCTCTGCAAACAGTGCCCGATGCTGTTGGGCAACGAAATCCGAATGCAGAAGCATGTGGAGAAAGCGCATACCGATGGAGCTTCCACTTGTAACGATTGCGGACGCTGTTTCCCGGGGCAGACCTCTTTGGAAGTGCACTCGCAAATGCACGCCGTTCGAACTTGCAGGATGTGTGGTCAACAGTTCACGAACCGTAGCTGCTACAGAGACCACAGATCCAAATGTGAGCCCGATGCTCGCCCGGACGTCCAACTAATGCCACGCAACAAACGATCGAACGTTCGAGATCCCGCGACCTTTACCTGCGATTACTGTAACAAGTCTTACCTCTCGCGGCCCCAACTCAAAAACCATATAGTGTGGATCCATATGGACGTTAGACCACATCAGTGCCAGTGGTGCGGAAAAAGGTTTTACACGCCGTCGCGGTTGGCCGAGCATACCATAGTGCATACGCGGGAGAGGAACTTCGGATGCGACATTTGTGGCGCCAAATTGGTAACCAAGATGGCCGCTATTTATCATAGGCGAAGGCATACAGGCGAAAAGCCTTATGAATGTGAAGATTGTGGTGAATGTTTTATATCGGCGTCGAGGAGATCGGAGCACGCGAAACGGAGACACGACAAGGGCCCGAAGGTTATGTGTTTGCAATGCCCCGCTACTTTTGTTAGGAGGCACGAGTTAAAAAGACATATGGAGAAGTCGCATAGGAGTCAGGGACAGAATCTGTCGAATGTGGTGCAAGTTGAAGGATAA
- Protein Sequence
- MELSSMLPETVCSGCVSTAMVAAPFVQLCKQADRRWTEISDFLTDLDVDISSNTKSTCICIESDEIKMVQSMEKLNNPRKVLRLIKSTGKIVMADGDSDYKCPQCEKVYSSIYLLNFHLKDINKKMCTQCKKIVRLDSFAKHAGLHGAVLHTCSKCRRIFVNRYNYDRHVQVCRTNRTGTHLCAECPQSFATDANLVAHYASKHYPRVCAACDKTFTNKVCFKNHAMFCADSKEVEQARSKLVCDYCSKQYSFKSALRLHIRFAHTVGTGVQCEQCGKKFSNVAHLREHDNTHNRVNDRFVCSVCGIKYSTRRGYERHYKRHFNDNEDISKMDTPNPKRKYSKLLQCIICNYMTGVEFDGDLPQGLCRSCSESALAAINFRQLCKESSNQWTQAISFMSDIEFPAEENKVYYIFYNTHKDIIINDQVEKAVKKEKSLQSKSKLQDESDEQIVARSERKKRSLWLWQCPDCGKKFSVAVHLNSHLKNTKKRVCNECGLVVSKTKFPQHLYMAHEKIVYPCGTCYQLFEDEISLNMHIGLTHGKSSHQCRVCGNGFSNERALSAHMYSHSLFYCTHCRRSFENRNCHVHHQRQCQTETPQPESSEYICDHCGNSYTKKPSLRIHIIQKHLNILPYVCETCGKRTSTIAHLRSHEKVHTLIRKTFQCHCGAKMRTELGYQLHLRIHTGERPYECKDCGDKFLSASRRLDHIKRRHRSAKDMPHGCTECSARFIDEEKNCPKGVCVTCTSSALAAHEFRVFVRNTQKTWSKAITAISDVSKAYAPSVKSLCTFIKPDFQVHTVKDYASGSSKAILNRLKQRLTKRDYKESERKTRTPRTGPACNCPDCGKSFFSPYFLRLHLKSSGTKEACLHCGAVLLRGSEMKDHLSTVHGEKLLLCKQCPMLLGNEIRMQKHVEKAHTDGASTCNDCGRCFPGQTSLEVHSQMHAVRTCRMCGQQFTNRSCYRDHRSKCEPDARPDVQLMPRNKRSNVRDPATFTCDYCNKSYLSRPQLKNHIVWIHMDVRPHQCQWCGKRFYTPSRLAEHTIVHTRERNFGCDICGAKLVTKMAAIYHRRRHTGEKPYECEDCGECFISASRRSEHAKRRHDKGPKVMCLQCPATFVRRHELKRHMEKSHRSQGQNLSNVVQVEG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -