Elac013246.1
Basic Information
- Insect
- Eudonia lacustrata
- Gene Symbol
- ttk
- Assembly
- GCA_947562085.1
- Location
- OX387339.1:38851747-38866244[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7 1.6e+04 -3.4 0.0 20 29 215 224 215 224 0.86 2 2 2.6e-17 6e-14 52.3 0.0 1 45 335 380 335 380 0.95
Sequence Information
- Coding Sequence
- ATGTCGCAGCAGTACAGCTTGAGATGGAACAACCACCAGCCAAACTTCATATCGATGTTTACGACGCTGCTGAACACGCAGACCCTCGTAGACGTGACCCTGGCTGCAGAGGGAAAGCATCTGCAGGCACACAAAGTAGTGCTGTCGGCATGCAGCACCTATTTTCAGGCCTTGTTTGTGGACAATCCGTCACGCCACCCCATCGTGATCCTGAAGGATGTGACGTTCGCGGACCTGCGCACAATGGTCGACTTTATGTACTACGGCGAGGTCAACGTTACTGAAGAACAGCTGCCACAGGTGCTGGACACTGCCAAGCTGCTCAAAATCAAAGGCCTCACCGAGATGCCGGACTCGACCTCGCTGACACGCTCGCAGAGCACCTGCGCAGACTTCCAATCACCCGGCGACTCCATCGACAGCCAGCGCCACTCTACCTCGCCCTCCGCCTCGCCCTCAAACAAACGCAAAAGGTTTGTACGCAGAAAGAGCTCGAGCGGGTCCACCTCGGTGAACATGGTGGAGGGCGCGGAGGAGGCGCAGGCGATAGAGCTGGTGCGCCCCGACACCATCACGCTCAGCAGCGTGCCGCAGCAGCGGCGCGCGCGCGACTACCACGACGACCGCGTCATGGAGAACGCGCACCACGCGGCGGAGGCACACAACATCAACGTGGAGCCACTCACGATGGACGGCAACCCCACCGGCATGCCGCAAGGAGGCCAGTGGAGCATGATCGAGCACACGTACCCGCGGTACTCCAACGCGTGCTTGGGCGGCGCGCTGCAGCAGGACGGCGCGCTGTACATGAGCGGCGTGATGGCGCACGCCGAGCCCGACCTGGAGTACGCGGCCATGGGGGCGGCACCGGGGGCGGGGGCGCACGCCGGCGGGGGTGGCGGGGGCGCCGGGCCTAGTTGCGCGGCCGAGCCGATGCAGCCCGAGCCCGCGCCGCCCGCGCCGCCCGCGCCGCCCAAGCGCCGCCGCACCACCAACCCGCAGTCCGAGGAGAACTTCCAGCGCGCGCTCGAGGCCGTGCGCTACGGCGGCATCGGCTTCTGCAAAGCCGCGCGTCTCTTCGGCGTCAACAACCGCACGCTATGGCTGGAATACAAGAAGAAGGGGTACCCCAACAGCCGGCCCAGCATCAAGAGCCGCATCAAGCGCGAGCACACGACGCCGCCGCCCGAGCACAAGGAGGAGCGGCCGCCCGCCGAGCAGCAGATGGCGCTGCTGTGCCCGCCGCATCCGGTGCCCGTGAGCTTCATCGAGTCGCGGCCGCTCGACTTCCCTCTACAGGGCGTGCCGCACAACTCGCCCCTCAACATCCTCGGCGTCAACTTCAACACCATGCAATAG
- Protein Sequence
- MSQQYSLRWNNHQPNFISMFTTLLNTQTLVDVTLAAEGKHLQAHKVVLSACSTYFQALFVDNPSRHPIVILKDVTFADLRTMVDFMYYGEVNVTEEQLPQVLDTAKLLKIKGLTEMPDSTSLTRSQSTCADFQSPGDSIDSQRHSTSPSASPSNKRKRFVRRKSSSGSTSVNMVEGAEEAQAIELVRPDTITLSSVPQQRRARDYHDDRVMENAHHAAEAHNINVEPLTMDGNPTGMPQGGQWSMIEHTYPRYSNACLGGALQQDGALYMSGVMAHAEPDLEYAAMGAAPGAGAHAGGGGGGAGPSCAAEPMQPEPAPPAPPAPPKRRRTTNPQSEENFQRALEAVRYGGIGFCKAARLFGVNNRTLWLEYKKKGYPNSRPSIKSRIKREHTTPPPEHKEERPPAEQQMALLCPPHPVPVSFIESRPLDFPLQGVPHNSPLNILGVNFNTMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00683476;
- 90% Identity
- iTF_00683476;
- 80% Identity
- iTF_00681747;