Epro005151.1
Basic Information
- Insect
- Eudemis profundana
- Gene Symbol
- -
- Assembly
- GCA_947034915.1
- Location
- CAMQQJ010000043.1:2869235-2872331[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0019 0.15 13.8 0.2 2 23 274 295 273 295 0.97 2 12 4.4 3.6e+02 3.2 0.2 5 14 446 455 444 459 0.86 3 12 0.00086 0.069 14.9 1.0 1 23 473 496 473 496 0.97 4 12 0.00032 0.026 16.2 0.6 1 23 501 523 501 523 0.98 5 12 0.02 1.6 10.6 2.0 2 23 545 567 544 567 0.93 6 12 0.064 5.1 9.0 3.7 1 23 571 594 571 594 0.97 7 12 0.23 18 7.3 0.3 2 23 617 639 616 639 0.93 8 12 1.7e-05 0.0014 20.2 2.8 1 23 649 671 649 672 0.96 9 12 0.0057 0.46 12.3 1.5 2 23 688 709 687 709 0.96 10 12 0.014 1.1 11.1 0.6 1 23 715 737 715 737 0.96 11 12 0.89 72 5.4 2.8 1 22 743 764 743 767 0.90 12 12 0.15 12 7.8 0.2 2 23 817 838 817 838 0.97
Sequence Information
- Coding Sequence
- ATGGCCTTAGAAAATACCCTCCAATCCGACCCACACTACCAGTTAACAGATAGCGTAATAATAAAGGAGGAGTTGGACAATAATATAGTTATAGAAGAACACAATGTAGCGTTACAACTGAAAATGGAGAAAGAAGATTATCAGACCACTGTAGAAGTTAAAGAGGAGCCAGAAGTAAACTTCAGGAAATATATAGAGAATAAGATATTAGAAGAATTCAAAGTACAAAGTGAAGTAGACTCTATATTGCCAATAATGGATCCTGAGGAAGAATCCAATGTGAAGCAGGAATGCTTAGAAGATGATGCGATGATCTCATATGATTTCCCGAACTTTGATGATGTTGGGAGTGTTGGACCGAGGAGTATGGAGGCTGGGAGCATGGACAGCAATGATGCTACAGCGCTTGGGAATGTAGAGGCGTGTCTCCAAGAGGATAATATCAGTGTAAAATATGAGAATGACGAATATGATGAGCCACATTTAAGTGTGAAAGAAGAAAGAGACTTAATGGTAACAGAAACACACTTAATATCAAACAAAGTGATCAACACAACGTCAACCATCACCAACCCGCAAGACGGGCTTATTGAGTCACAAACAACCAAGACGTTAGTCATGGAGATCCATCCCATGTCACACGCTGGCAGTGTGCCGCTGTCTAAAATGGGCAACCCAGAAGAAATCCTACCCACCAATGAAGTAGAATTTGAAGACTTTCTCCTAAACTCCATTACAGGGAACGAATTAACACTGGAACAGGAGGCCTATGGACTTttaaaagcaaagaaaaagagAAGTGATGTAAAGAAGACCCTCCAGTGTCCTAAATGTGTGAACATGTACCGAACAACCGCAGCGCTACAGAGGCATTTGATGGTGCATGCTGGGATTGAGAAACGCGCTATGGGAGTCATTAAAGGACAGAAGACAAGGAAACTAAACAAACTTAAAGCGGAGAAGGAATGTCGCGTCGCTAAAAGAAACGAACATCGTATGTTGACAAAGAACGAACTTCGTATCTCGACAAAGAAAGAACATCGTATCCCGAAAAAGAACGAACATCGTATCCCGAAAAAGAACGAACATCATATCTCGACAAAGAACGAACATCGTATCCCGAAAAAGAACGAACATCATATCTCGACAAAGAACGAACATCGTCTCCCGAAAAAGAACGAACATCATATCTCGACAAAAAACGAACATCGTATCGCAACAAAGAGCGAACATCGTATCTCGACAAGGAGTGAACATCGTGTCTCgacaaagaacgaaaagaagaaaataaagaagaaaCCAGTGGAAATGGTGAGAAAGGAAGGCTATGAATGTACCTGCGGGAAGATCTTTAGGAGAAGAAGTCGCATGGAGACCTGTCTGAGATCACACAACTTGTTTGACGAAGTGGAAACCTACCCGTGTCTTACTTGCGCAAGAAGCTTTAAAGACAAAACGGAACTAGCGTTACACAGAAAAAGATTCCACACCAAAAAGAAATTCCCCTGTAAATTTTGCCCCACGGATTACAACACGCCGAAAGAACTATTTAAGCATTTACAAATACACCAGAAGGTTCAGTTAATGGAGTACAAAGTTATTTCAGAGATAGTCAAGGGCAAAAAGAAGATGCGATGTTTCATGTGTTCGAAAACTTGTACAGAGCTTTCAGATTTAAAGTCTCACGTTATGGACGACCACAAGGAGCCTTACATTTGTCAGCATTGTCAGCATACTTTTCCTAAAATAATAGATTTTGCTAATCACACGAAAACATCACATCCGGAAGTCGAAGGGCAATCTGTCTTAGATGTGTTAGAAGCGTTTTCAAAACTGGTACAAGCGTGGAAATGCGAAGAATGTGAACTCCAGTTTCATGAAGCCGACAAATTAGCTATGCATCAGATAGAGAAACACAGTCGGGAAGTGAAATCCGAACAGCAGTTCCAGTGTACGGATTGTAGAAGAGTGTTCATCAGTCAAAAAGGCTTAACGTCGCATAGAAGAGTACATCACAATACAGGGGAAACCGAAATTAATGAGATCATAGAGCAGGGCATAATGTGTTTAGAATGCAGAAAGATATGCAAAGATATGACTGCGTTGACATCTCATATGAGATTACACTCTCCTGAGCGGAAATATCCGTGCAAATTTTGCGATTTTCGATTTGCAACACCTGAAAAAAGGAAAACACATGCGGAGATCCATACAGGTGATATGAAGTACGTGTGTTTCATCTGTGAATATCAGTGTACATCAGAAAATAGACTGAAGCAGCACAAATTGTCGGTTAAACATTCGAATATGAAGGAGTATTTGTTGACCGGTAAAGTAGAAAATGGTTCAACGTCGCAACAGGAGCAAATCAAAGTGTCTCAAAGTAAAAGTgttaagaaaaagaaaaaagaacagGAGAAAGAGGAAACTTCAGAGGAATTGGAAGCGACTTGTGAAGTGTGCGCTGAGAAGTTTCCGAATGAAGAGAAAATGTTGGAGCACAAGCAAACCCATCCGTTTATAGAGTTTCCTAACGAAGATACGCCGAGCAGGATATTCTTCAAGTAG
- Protein Sequence
- MALENTLQSDPHYQLTDSVIIKEELDNNIVIEEHNVALQLKMEKEDYQTTVEVKEEPEVNFRKYIENKILEEFKVQSEVDSILPIMDPEEESNVKQECLEDDAMISYDFPNFDDVGSVGPRSMEAGSMDSNDATALGNVEACLQEDNISVKYENDEYDEPHLSVKEERDLMVTETHLISNKVINTTSTITNPQDGLIESQTTKTLVMEIHPMSHAGSVPLSKMGNPEEILPTNEVEFEDFLLNSITGNELTLEQEAYGLLKAKKKRSDVKKTLQCPKCVNMYRTTAALQRHLMVHAGIEKRAMGVIKGQKTRKLNKLKAEKECRVAKRNEHRMLTKNELRISTKKEHRIPKKNEHRIPKKNEHHISTKNEHRIPKKNEHHISTKNEHRLPKKNEHHISTKNEHRIATKSEHRISTRSEHRVSTKNEKKKIKKKPVEMVRKEGYECTCGKIFRRRSRMETCLRSHNLFDEVETYPCLTCARSFKDKTELALHRKRFHTKKKFPCKFCPTDYNTPKELFKHLQIHQKVQLMEYKVISEIVKGKKKMRCFMCSKTCTELSDLKSHVMDDHKEPYICQHCQHTFPKIIDFANHTKTSHPEVEGQSVLDVLEAFSKLVQAWKCEECELQFHEADKLAMHQIEKHSREVKSEQQFQCTDCRRVFISQKGLTSHRRVHHNTGETEINEIIEQGIMCLECRKICKDMTALTSHMRLHSPERKYPCKFCDFRFATPEKRKTHAEIHTGDMKYVCFICEYQCTSENRLKQHKLSVKHSNMKEYLLTGKVENGSTSQQEQIKVSQSKSVKKKKKEQEKEETSEELEATCEVCAEKFPNEEKMLEHKQTHPFIEFPNEDTPSRIFFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -