Basic Information

Insect: Eudemis profundana
Gene Symbol: PLAG1
Assembly: GCA_947034915.1
Location: CAMQQJ010000022.1:1723100-1752666[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.29 23 6.9 0.7 2 23 245 266 244 266 0.97

2 11 6.9 5.6e+02 2.6 0.2 1 21 300 320 300 322 0.74

3 11 0.00051 0.041 15.6 4.4 2 23 328 350 327 350 0.96

4 11 0.0058 0.47 12.3 0.2 2 23 359 381 359 381 0.91

5 11 0.014 1.1 11.1 0.2 2 19 528 545 527 549 0.93

6 11 0.00085 0.068 14.9 1.7 3 23 559 580 558 580 0.96

7 11 3.7e-05 0.003 19.2 1.0 1 23 585 608 585 608 0.97

8 11 0.0074 0.6 11.9 2.2 1 23 634 656 634 656 0.98

9 11 1.4e-05 0.0011 20.5 1.1 1 23 662 685 662 685 0.95

10 11 0.00052 0.042 15.6 1.1 1 23 691 713 691 713 0.98

11 11 5.2e-06 0.00042 21.9 0.5 1 23 719 742 719 742 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.29	23	6.9	0.7	2	23	245	266	244	266	0.97
2	11	6.9	5.6e+02	2.6	0.2	1	21	300	320	300	322	0.74
3	11	0.00051	0.041	15.6	4.4	2	23	328	350	327	350	0.96
4	11	0.0058	0.47	12.3	0.2	2	23	359	381	359	381	0.91
5	11	0.014	1.1	11.1	0.2	2	19	528	545	527	549	0.93
6	11	0.00085	0.068	14.9	1.7	3	23	559	580	558	580	0.96
7	11	3.7e-05	0.003	19.2	1.0	1	23	585	608	585	608	0.97
8	11	0.0074	0.6	11.9	2.2	1	23	634	656	634	656	0.98
9	11	1.4e-05	0.0011	20.5	1.1	1	23	662	685	662	685	0.95
10	11	0.00052	0.042	15.6	1.1	1	23	691	713	691	713	0.98
11	11	5.2e-06	0.00042	21.9	0.5	1	23	719	742	719	742	0.96

Sequence Information

Coding Sequence: ATGTCGCAGCTGGCGTTGCGCGATGGGTTCCCGCAGCACCTGTGCGAACAGTGCCACGCCCGGCTCCAGCAGAGCTGCGACCTGCGCGCGCGCAGCCGACGCGCGCAGGACCTCCTCAAGCAGTCGCTGGTGCATCAACATTATATCACAACGGATTTCATCCGAAGCCTGGACCGGCTCGCGCACCGGCTGCTCCCAGCGGACGACAAACCCGACGACTACCCGCCGCAGCCCAGCATCCTCGCAGACTACCTCGACAACGACTCCAACGACAGTTCACAACTGCTATCCACACTATGCGCACGCGACGGAGATCTGACAGACATCAAAGACGACAACTACATAGAACTACCAGTCGTGGGAGAAATGGTAGAATTAGACGAGAAACTAGCGGAAATTAAAGTGGTAGAAACTAAGATTAAGAAGGAGCGGGGAGTGAAGAGGAAACGGTCAGTTAAGAAGGAGAAGAGGAAAGGAAGAGTAAGTAAAAAGAGGCGAGAGGCGGAAGAGGTCGCGGAGGTGAAGGAGGAGAAGCCGGGGGTGGAGTGGGTGGCCAAGAAGAAGGCGCACGCGCGGAAGAAGAAGGGCTTCAAGCGGTACTTCATGTGTGAAGAGGACTACGCCAAGTTCGAGGAGAGATACAACATACAGGTGGTCCGGCTGTCGGAAGAGGAGCAACTGCGAGAGATGGCGGCCCGCAAGGAGTCGGAAAACTACCTGCACGCGCTCGTGCGCTGCGACAAGTGCTACAAGGGCTTCCTCTCCATGTTTACCTACGAGAACCACATCAAAGTGCACGACCCGGCGCTTGGCCCCAACGAGTGCCATTTCTGCTTCTGTCGGTTCAAATGGCCGAACAAACTGCGCACGCACCTCATTGAGTGCCATCAACTCAAGTACGTCTGCAAGGAGTGCAAGCTGGTCATCCGCGGCCGGTACATGGCCGTCATGCACGCGCAGTTCCACGCCGGCAAGACCTGGGAGTGCAAGCACTGCACGCAGACCTTCAAAAAGCAGTCCACATTCTACACACACCTCCGGATCAACCACTCGACGCAGAACGCGGTGGGCGGCACCTGTGACATCTGCGGGGAGACCTTCACGGGCGCCATGGGGCTCCGCATGCACAAGACACAGACACACAACAAGGTGTCGTATACTGTCACAGCCCACGTCACACACCGCATGCACAAGACCCAGACACACAAGCCACGTCACACACCGCATGCACAAGACGCACACAACAAGGTGACGTATACCCGTGTCACAGTCCACGTCACACACCGCATGCACAAGACGCACACACACAAGGTGACGTATACCCGTGTCACAGCCCACGTCACACACCGCATGCACAAGACGCACACACACAAGGTGACGTATACCCGTGTCACAGCCCACGTCACACACCGCATGCACAAGACGCACACACACAAGGTGACGTATACCCGTGTCACAGTCCACGTCACACACCGCATGCACAAGACGCACACACACAAGGTGCCGTATACCCGTGTCACAGTCCACGTCACACACCGCATGCACAAGACGCACACACACAAGAAAGAAATAAAAGCGCTGAAATGTCTAATCTGCAAGATACAGTTCGAGAACAAGGAGGCGCTCGAGCGGCACTCTCAACCCCACAACGACTGCGACCCCAAACTGCGATTCTGCGAGACTTGCGGCTGTTCGTTCACGGACGAGGACCAGCTGAGCCTGCACCGGCAGCGGGCCCACGGCGTCGAGGTCTACAAGTGTGACGACTGCAACAAGTCGTTCCTGTCAAAATCGTCCCTGTCGACGCACATAGACCGGGTGCACCTCAACATAAAACCTCGCTTCCGTTTCTACAACTACAAGAAAAACGCGCGGGGCCGGCCCGGAGTGAAGCTTGACTACATGTGCGAGACCTGCGGGAAGGCCTATACGTGCTTCGCGTTGCTGAAGACGCACCAGATGAGCCACACGGGCGAACGGCCCTTCAAATGCACACAGTGCCCGAAGAGCTTCATCACAGCTTCACAATTAAAGGGTCACCGGGACAGCTTCCACGCGCGCATCAGAAAGTACCGGTGCCCGCAGTGCCCGAAGACCTTCCTGCGGCAGTCATCCATCTACAAGCACCGTCTGATCCACACAGGCGAGAAGCCCTACGAATGCAGCATctgcagcaaggcgttcacgcAGTCGGGCTCGCTCACCACCCACGTGAAGTACGTGCACATGAAGCTGAAGCCGCCGCCGCGCAAGCGCAACAAGGCACTAGACAAGGCTTACTAG
Protein Sequence: MSQLALRDGFPQHLCEQCHARLQQSCDLRARSRRAQDLLKQSLVHQHYITTDFIRSLDRLAHRLLPADDKPDDYPPQPSILADYLDNDSNDSSQLLSTLCARDGDLTDIKDDNYIELPVVGEMVELDEKLAEIKVVETKIKKERGVKRKRSVKKEKRKGRVSKKRREAEEVAEVKEEKPGVEWVAKKKAHARKKKGFKRYFMCEEDYAKFEERYNIQVVRLSEEEQLREMAARKESENYLHALVRCDKCYKGFLSMFTYENHIKVHDPALGPNECHFCFCRFKWPNKLRTHLIECHQLKYVCKECKLVIRGRYMAVMHAQFHAGKTWECKHCTQTFKKQSTFYTHLRINHSTQNAVGGTCDICGETFTGAMGLRMHKTQTHNKVSYTVTAHVTHRMHKTQTHKPRHTPHAQDAHNKVTYTRVTVHVTHRMHKTHTHKVTYTRVTAHVTHRMHKTHTHKVTYTRVTAHVTHRMHKTHTHKVTYTRVTVHVTHRMHKTHTHKVPYTRVTVHVTHRMHKTHTHKKEIKALKCLICKIQFENKEALERHSQPHNDCDPKLRFCETCGCSFTDEDQLSLHRQRAHGVEVYKCDDCNKSFLSKSSLSTHIDRVHLNIKPRFRFYNYKKNARGRPGVKLDYMCETCGKAYTCFALLKTHQMSHTGERPFKCTQCPKSFITASQLKGHRDSFHARIRKYRCPQCPKTFLRQSSIYKHRLIHTGEKPYECSICSKAFTQSGSLTTHVKYVHMKLKPPPRKRNKALDKAY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -