Basic Information

Insect: Eudemis profundana
Gene Symbol: -
Assembly: GCA_947034915.1
Location: CAMQQJ010000388.1:152474-156266[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.003 0.24 13.1 0.7 1 23 28 51 28 51 0.95

2 15 0.024 1.9 10.3 3.2 2 23 123 144 122 144 0.97

3 15 0.0011 0.087 14.6 0.5 1 23 148 170 148 170 0.97

4 15 0.0045 0.37 12.6 0.5 1 23 177 200 177 200 0.97

5 15 0.0018 0.15 13.8 1.3 2 23 208 230 207 230 0.95

6 15 0.11 9.1 8.2 0.1 1 23 301 324 301 324 0.93

7 15 0.025 2 10.3 0.6 2 23 351 373 350 373 0.94

8 15 0.0039 0.31 12.8 0.7 2 23 396 417 395 417 0.95

9 15 3.7 3e+02 3.4 1.6 1 23 421 443 421 443 0.91

10 15 0.028 2.2 10.1 0.9 1 23 448 471 448 471 0.90

11 15 0.013 1 11.2 1.2 2 23 479 501 478 501 0.92

12 15 9.5e-05 0.0076 17.9 0.8 2 23 509 531 508 531 0.96

13 15 0.12 9.7 8.1 6.8 1 23 537 559 537 559 0.95

14 15 5.6e-06 0.00045 21.7 1.0 1 23 565 587 565 587 0.98

15 15 5.4e-06 0.00044 21.8 2.7 1 23 593 616 593 616 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.003	0.24	13.1	0.7	1	23	28	51	28	51	0.95
2	15	0.024	1.9	10.3	3.2	2	23	123	144	122	144	0.97
3	15	0.0011	0.087	14.6	0.5	1	23	148	170	148	170	0.97
4	15	0.0045	0.37	12.6	0.5	1	23	177	200	177	200	0.97
5	15	0.0018	0.15	13.8	1.3	2	23	208	230	207	230	0.95
6	15	0.11	9.1	8.2	0.1	1	23	301	324	301	324	0.93
7	15	0.025	2	10.3	0.6	2	23	351	373	350	373	0.94
8	15	0.0039	0.31	12.8	0.7	2	23	396	417	395	417	0.95
9	15	3.7	3e+02	3.4	1.6	1	23	421	443	421	443	0.91
10	15	0.028	2.2	10.1	0.9	1	23	448	471	448	471	0.90
11	15	0.013	1	11.2	1.2	2	23	479	501	478	501	0.92
12	15	9.5e-05	0.0076	17.9	0.8	2	23	509	531	508	531	0.96
13	15	0.12	9.7	8.1	6.8	1	23	537	559	537	559	0.95
14	15	5.6e-06	0.00045	21.7	1.0	1	23	565	587	565	587	0.98
15	15	5.4e-06	0.00044	21.8	2.7	1	23	593	616	593	616	0.98

Sequence Information

Coding Sequence: ATGCAGAAACAGTGGCATAACCTGACGACCTTGCTCAAGTATTCGAACGCAACCCCGTTCAAGGACAGGAATGACGCGGGCTACATATGCGCTTACTGTTTCAAAACATACCCCGACCCGGAGGTACTGCGACATCACACACAAAACGACCACGTCAAAGAGAAACCGACCTATAAAGCGGGCTCCGGCATGAGCAGCTTCGTCGCCTTCCTAGACATTGTTGATCTAAAATGCATCCTCTGCAATCTCCCCTTTGAAAACCTTAAAGACCTCCCCGAGCATCTAGTCAAAGTGCACGACAAAAAATACTTCCTCGGTGTCACCGATTATTTCCAACCCTTCAAACTGACTAACGAGCAACAGATTAAATGCTGTCTATGCAGCGAAGCCTTCCACAACATGAAGTTGTTGATGCAACACATGAATGTCCACTACAGGAACTTCATCTGTACGACTTGTGGAGCCGGATTTGTGAACAGCTTCAGGCTGAACAGGCATGAGACCACGCATGGGAAGAAAAAGTCCAGCTTCCCTTGTCGACATTGCGGGCAAGTATTTGCAGCTGAGTCCAAGAAGAAAGCTCATGTTAACACTGAACATAAAGGCATCGCGGGGGACAGTGTGTGCCAAATATGCAAGGCGCGTTTTAAGAATTACTATCAGAAGACTAGGCACATGATGCAAGTGCACAACGTTGAGGGTATCGCCAGCGAAGcgataataaataaacacgtgAGTAAAGTTAAATGCGGAACAGCAGGCAAGGTGGAAGTTGACGATTGGTCCGTCACTAATGAAACACTTGAAGACAAACAAgatattcataaacatttgAAAAATATAAGAACCATACTACTCTATTCTAACGCTACGCCTATAAGACGGCACACTGGGGTAGGATACGCCTGTGCTTTCTGCGCCACTAACTACGTGAATCCCCAAGAGCTAAAGCAACATACATTAGAAGATCATGACGTTTCCCATATAGAAGAATACATGAAAGGTTCCCCTATCGCCAAATTTGCACCCAAACTTGACATAACCTCTTTACACTGCGAACTTTGTGACACAGAGTTTAAAGAACTAGAACAGTTCTTGGTCCATCTGAAAGAAGAACACGATAAAGAAGTTTACACTGATGTAAACAATCACATAATGCCGTTTAAATTTAACGATGACGTTTTAAAATGCGCCGTGTGCGATAAAGAGTTTGAATACTTCAAGAAACTACAGGAGCACATTAGCTTTCATTACAGGAACTATTTGTGCAACATTTGCTCTGCGCCGTTCATGTGTGAGAAATCCCTGAAAACCCACAAAAACGCTCACAAACAGGGAGAGTTTCCATGCAGTCTGTGTCAAAAAGTTTTCGACACTAGGGCAAAGAAGAATGACCACGAAAAGTTCGTCCATATAGGCAACCATAAGAGGAGTAAATGCCCTTACTGCTCGGAGAAATTCACGAGCCATGGGAAGCGTGTTAAGCATATTGCAGAAGAACACGGAGGAAAACCATTAGAGCTTAAATGTAATGCGTGCCCACTGACGTTTAAGAGCAGAGACGCTCTCACGCGTCACACGAAGCGTGACCACCTCATGGAGCGACGACATCACTGTCCCCTTTGCGACATGAGGTTCTTCAATAAATCCCAACTAACATGCCACATCGTAAAACACAATGGAGACAAGCAATACAGCTGTGACGTCTGCTTAAAATCCTACGCGAGGAAAAAGACACTACGCGAGCACATGAGAATACACACGGACGACAGAAGGTTCAAGTGCGAGATTTGTGGGCAGGCGTTCATTCAGAAATGCAGCTGGAAAAGCCACATGCGGACCAAACACGGGGAATTGGTTTAG
Protein Sequence: MQKQWHNLTTLLKYSNATPFKDRNDAGYICAYCFKTYPDPEVLRHHTQNDHVKEKPTYKAGSGMSSFVAFLDIVDLKCILCNLPFENLKDLPEHLVKVHDKKYFLGVTDYFQPFKLTNEQQIKCCLCSEAFHNMKLLMQHMNVHYRNFICTTCGAGFVNSFRLNRHETTHGKKKSSFPCRHCGQVFAAESKKKAHVNTEHKGIAGDSVCQICKARFKNYYQKTRHMMQVHNVEGIASEAIINKHVSKVKCGTAGKVEVDDWSVTNETLEDKQDIHKHLKNIRTILLYSNATPIRRHTGVGYACAFCATNYVNPQELKQHTLEDHDVSHIEEYMKGSPIAKFAPKLDITSLHCELCDTEFKELEQFLVHLKEEHDKEVYTDVNNHIMPFKFNDDVLKCAVCDKEFEYFKKLQEHISFHYRNYLCNICSAPFMCEKSLKTHKNAHKQGEFPCSLCQKVFDTRAKKNDHEKFVHIGNHKRSKCPYCSEKFTSHGKRVKHIAEEHGGKPLELKCNACPLTFKSRDALTRHTKRDHLMERRHHCPLCDMRFFNKSQLTCHIVKHNGDKQYSCDVCLKSYARKKTLREHMRIHTDDRRFKCEICGQAFIQKCSWKSHMRTKHGELV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -